Regulon of Rex in Roseburia intestinalis L1-82
| Regulator type: | Transcription factor |
| TF locus tag: | ROSINTL182_04859 |
| Regulator family: | Rex |
| Regulation mode: | repressor |
| Biological process: | Energy metabolism |
| Effector: | NADH |
| Regulog: | Rex - Clostridia-3 |
| Statistics of regulated genes: | |
| - Genes | 12 |
| - Operons | 9 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Clostridia-3
- By TF family - Rex
- By effector - NADH
- By pathway - Energy metabolism
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -41
Score: 5.6 Sequence: TTGTTAATTTTTTATCAA
Locus tag: ROSINTL182_00883
Name: crt Funciton: 3-hydroxybutyryl-CoA dehydratase (EC 4.2.1.55) |
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crt
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3-hydroxybutyryl-CoA dehydratase (EC 4.2.1.55)
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Position: -30
Score: 5.2 Sequence: ATGGTAAATTTTTAACAA
Locus tag: ROSINTL182_02872
Name: cat2 Funciton: 4-hydroxybutyrate:acetyl-CoA CoA transferase (EC 2.3.1.-) |
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cat2
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4-hydroxybutyrate:acetyl-CoA CoA transferase (EC 2.3.1.-)
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Position: -82
Score: 5.4 Sequence: TTGTTAAAAAATTAACAG
Locus tag: ROSINTL182_02619
Name: null Funciton: 3-ketoacyl-CoA thiolase (EC 2.3.1.16) |
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3-ketoacyl-CoA thiolase (EC 2.3.1.16)
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Position: -90
Score: 5.4 Sequence: TTGTTAAGTTTTTAACAA
Locus tag: ROSINTL182_01690
Name: aroE Funciton: Shikimate/quinate 5-dehydrogenase I beta (EC 1.1.1.282)
Locus tag: ROSINTL182_01691
Name: kefA Funciton: potassium efflux system KefA
Locus tag: ROSINTL182_01692
Name: aroD Funciton: 3-dehydroquinate dehydratase I (EC 4.2.1.10)
Locus tag: ROSINTL182_01693
Name: aroD Funciton: 3-dehydroquinate dehydratase I (EC 4.2.1.10) |
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aroE
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Shikimate/quinate 5-dehydrogenase I beta (EC 1.1.1.282)
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kefA
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potassium efflux system KefA
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aroD
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3-dehydroquinate dehydratase I (EC 4.2.1.10)
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aroD
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3-dehydroquinate dehydratase I (EC 4.2.1.10)
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Position: -69
Score: 4.7 Sequence: TAGTTAAAAATTTCACAC
Locus tag: ROSINTL182_04859
Name: rex Funciton: Redox-sensitive transcriptional regulator (AT-rich DNA-binding protein) |
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rex
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Redox-sensitive transcriptional regulator (AT-rich DNA-binding protein)
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Position: -86
Score: 5.2 Sequence: TTGTTATAAATTTAACTT
Locus tag: ROSINTL182_02682
Name: fba Funciton: Fructose-bisphosphate aldolase class II (EC 4.1.2.13) |
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fba
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Fructose-bisphosphate aldolase class II (EC 4.1.2.13)
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Position: -90
Score: 5 Sequence: TTGACAAAAAAATAACAT
Locus tag: ROSINTL182_03866
Name: pckA Funciton: Phosphoenolpyruvate carboxykinase [ATP] (EC 4.1.1.49) |
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pckA
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Phosphoenolpyruvate carboxykinase [ATP] (EC 4.1.1.49)
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Position: -142
Score: 5.2 Sequence: TAGTGAAAAATTTAACAA
Locus tag: ROSINTL182_01942
Name: gap Funciton: NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12) |
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gap
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NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12)
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Position: -125
Score: 5.6 Sequence: TTGTTATTTAATTAACAA
Locus tag: ROSINTL182_03172
Name: bdh Funciton: Butanol dehydrogenase; Butyraldehyde dehydrogenase |
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bdh
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Butanol dehydrogenase; Butyraldehyde dehydrogenase
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |