Profile of regulator Rex in Clostridia-3
| Regulator family: | Rex |
| Regulation mode: | repressor |
| Biological process: | Energy metabolism |
| Effector: | NADH |
| Regulog: | Rex - Clostridia-3 |
Member of regulog collections
- By taxonomy - Clostridia-3
- By TF family - Rex
- By effector - NADH
- By pathway - Energy metabolism
Transcription factor binding sites
| Locus Tag | Name | Position | Score | Sequence | |
|---|---|---|---|---|---|
| Bacteroides pectinophilus ATCC 43243 | |||||
| BACPEC_02251 | adhE | -48 | 5.5 | TTGTTAAAATATTAACGA | |
| BACPEC_03060 | bdh | -43 | 5.1 | ATGATAAAAAATTAACGA | |
| BACPEC_00707 | ladH | -55 | 4.9 | GTGTTATAATTTTAACAG | |
| BACPEC_01917 | pckA | -135 | 5.2 | TCGTTAAAATTTTATCAT | |
| BACPEC_01128 | phf1 | -57 | 4.8 | GTGTGAAAATATTAACAT | |
| BACPEC_03240 | pflB | -128 | 5.2 | TTGTTGATTTTTTAACAA | |
| BACPEC_01011 | rex | -69 | 4.4 | TTGACATGATTTTAACGA | |
| BACPEC_01494 | por | -158 | 4.4 | TTGACAAAGGTTTAACAA | |
| BACPEC_01011 | rex | 7 | 4.4 | GCGATAAAAAAATATCAT | |
| Blautia hansenii DSM 20583 | |||||
| BLAHAN_03194 | bdh | -65 | 4.8 | TCGTTAAAAAAATAACGT | |
| BLAHAN_03194 | bdh | -51 | 5 | ACGTTAAAAAAATAACAT | |
| BLAHAN_02079 | pckA | -179 | 5.2 | TCGTTAAATTTTAAACAA | |
| BLAHAN_02340 | rex | -40 | 4.7 | TTGACTTTAATTTAACAA | |
| Bryantella formatexigens DSM 14469 | |||||
| BRYFOR_04079 | pckA | -140 | 5.2 | TTGTTAATAAAATATCAT | |
| BRYFOR_02286 | rex | -59 | 4.6 | TTGACATTTTTTTCACAT | |
| Clostridiales bacterium 1_7_47_FAA | |||||
| Cbac1_010100020622 | adhE | -92 | 4.9 | TTGACATATTTTTAACGA | |
| Cbac1_010100020622 | adhE | -50 | 5.6 | TTGTTAATTAATTATCAA | |
| Cbac1_010100013906 | stpK | -119 | 5.2 | ACGTTAAAAATTTATCAA | |
| Cbac1_010100015703 | bdh | -54 | 5.2 | TTGTTAAAGAAATAACAA | |
| Cbac1_010100019254 | gap | -54 | 5.2 | TTGATTATTATTTAACAA | |
| Cbac1_010100016333 | ladH | -81 | 5.7 | TTGTTATAATATTAACAA | |
| Cbac1_010100026864 | pckA | -69 | 4.6 | TTGACTTTTAATTAACAA | |
| Cbac1_010100011950 | fba | -39 | 5.2 | TAGTTAATAAAATAACAA | |
| Cbac1_010100009193 | phf1 | -106 | 5.5 | TTGATATAAAATTAACAA | |
| Cbac1_010100002579 | pncB | -140 | 5.6 | TTGTTATATTTTTAACAT | |
| Cbac1_010100019049 | pgpB | -86 | 5.3 | TTGTGAAAATATTAACAT | |
| Cbac1_010100004767 | COG1959 | -34 | 5.3 | TTGTTATATCTTTAACAA | |
| Cbac1_010100025357 | asrA | -134 | 4.6 | ATGATAAATTTTTATTAT | |
| Cbac1_010100025357 | asrA | -76 | 5.4 | TTGTTATAATAATAACAT | |
| Cbac1_010100026274 | rex | -77 | 4.3 | TTGACATTTTTTTGACAC | |
| Cbac1_010100004252 | nadO | -67 | 5.3 | TTGTTAATTAGTTAACAA | |
| Clostridium bolteae ATCC BAA-613 | |||||
| CLOBOL_06541 | adhE | -135 | 4.8 | TTGACATTTTTTTAACGA | |
| CLOBOL_00811 | stpK | -119 | 5.2 | ACGTTAAAAATTTATCAA | |
| CLOBOL_06541 | adhE | -93 | 5.6 | TTGTTAATTAATTATCAA | |
| CLOBOL_05214 | gap | -54 | 5.3 | TTGATTAATATTTAACAA | |
| CLOBOL_03318 | ladH | -92 | 5.7 | TTGTTATAATATTAACAA | |
| CLOBOL_02749 | fba | -37 | 5.2 | TAGTTAATAAAATAACAA | |
| CLOBOL_05631 | phf1 | -61 | 5.6 | TTGATATAATTTTAACAA | |
| CLOBOL_06020 | pncB | -141 | 5.5 | TTGTTAAATTTTTATCAT | |
| CLOBOL_05166 | pgpB | -81 | 5.4 | TTGTTAAAATATTAACAG | |
| CLOBOL_02457 | COG1959 | -33 | 5.4 | TTGTTACAATTTTAACAA | |
| CLOBOL_00463 | asrA | -133 | 4.6 | ATGATAAAAATTTATTAT | |
| CLOBOL_00463 | asrA | -75 | 5.4 | TTGTTATAATAATAACAT | |
| CLOBOL_04148 | rex | -79 | 4.3 | TTGACATTTTTTTGACGT | |
| Clostridium nexile DSM 1787 | |||||
| CLONEX_04092 | adhE | -73 | 5 | TTGACAAATATTTAACGA | |
| CLONEX_04091 | stpK | -102 | 4.8 | TTGTTAAAAAATACTCAA | |
| CLONEX_01601 | bdh | -71 | 4.6 | GCGTTAAATAATTAACAG | |
| CLONEX_01601 | bdh | -43 | 4.5 | CTGTTAAAAGGTTAACAA | |
| CLONEX_00392 | aroE | -63 | 5.5 | TTGTTTAAAATTTAACAA | |
| Clostridium scindens ATCC 35704 | |||||
| CLOSCI_02188 | adhE | -54 | 5.5 | TTGTTAAAAAAATATCAA | |
| CLOSCI_02188 | adhE | -29 | 5.3 | TTGACAAATAATTAACAA | |
| CLOSCI_02187 | stpK | -107 | 5.6 | ATGTTAAATATATAACAA | |
| CLOSCI_02187 | stpK | -69 | 5 | AAGTTAAAAAAATATCAA | |
| Dorea formicigenerans ATCC 27755 | |||||
| DORFOR_01318 | adhE | -150 | 5.1 | ATGATAAAAAATAAACAA | |
| DORFOR_01318 | adhE | -130 | 5.2 | ATGTTAAAAAAATATCAT | |
| DORFOR_01318 | adhE | -105 | 4.9 | TTGACAAATAATTAACGA | |
| DORFOR_01431 | gap | -89 | 4.7 | TTGATGAATCTTTAACAA | |
| DORFOR_01493 | bdh | -76 | 4.9 | GCGTTAAATTATTATCAA | |
| DORFOR_01493 | bdh | -43 | 4.5 | GTGATAAAAATTTAACGC | |
| DORFOR_00826 | ladH | -57 | 5.1 | TTGTTAAAATAAAAACAT | |
| DORFOR_01796 | pckA | -118 | 4.8 | TTGTTAAAAATTTATTGA | |
| DORFOR_01112 | fba | -125 | 5 | TTGTTAAAAATATGACGA | |
| DORFOR_02389 | ppsA | -148 | 5.2 | TTGACAAAAATATAACAA | |
| DORFOR_01508 | pflB | -160 | 5 | TTGTCAATAGTTTAACAA | |
| DORFOR_02415 | por | -133 | 4.8 | TCGTTAATTTTGTATCAA | |
| Dorea longicatena DSM 13814 | |||||
| DORLON_02221 | adhE | -117 | 5.3 | ATGTTAAAAAAATATCAA | |
| DORLON_02221 | adhE | -97 | 4.9 | ATGTGAAAAAAATATCAA | |
| DORLON_02221 | adhE | -72 | 4.8 | TTGACAAAGAATTAACAA | |
| DORLON_02222 | stpK | -144 | 5.5 | ATGTTAAAAAAATAACAA | |
| DORLON_02222 | stpK | -106 | 4.7 | TAGTGAAAAAAATATCAA | |
| DORLON_00585 | bdh | -110 | 4.5 | ATATTAAAAAAATCACAA | |
| DORLON_00585 | bdh | -44 | 4.5 | GTGTTAAAAGATTAACAC | |
| DORLON_02552 | ladH | -231 | 5 | AAGTTATTTATATAACAA | |
| DORLON_02552 | ladH | -102 | 4.7 | TTGTTAAAATAAAGACAT | |
| DORLON_00700 | aroE | -53 | 4.8 | TTGTTAAAATATAAGCAA | |
| Eubacterium eligens ATCC 27750 | |||||
| EUBELI_02054 | adhE | -54 | 5.6 | TTGTTAAATTATTATCAA | |
| EUBELI_02006 | bdh | -28 | 5.4 | TTGTTTATAATTTAACAA | |
| EUBELI_01190 | gap | -57 | 5 | TAGTTGAAATTTTAACAA | |
| EUBELI_01188 | tpi | -144 | 5.3 | TTGTTATTTATTTCACAA | |
| EUBELI_20348 | ladH | -170 | 5 | TTGTTATAAGTATAACAT | |
| EUBELI_20348 | ladH | -78 | 5 | TTGTTATTATTTTGTCAT | |
| EUBELI_01169 | pckA | -110 | 5 | TCGAGAAAAATTTAACAA | |
| EUBELI_01258 | ppsA | -71 | 5.6 | ATGTTATAATTTTAACAA | |
| EUBELI_01405 | phf1 | -40 | 4.8 | TCGATAATTTTTTGTCAA | |
| EUBELI_01680 | pfkA | -93 | 5.1 | TTGGTAAAAAATTATCAA | |
| EUBELI_01381 | rex | -114 | 4.8 | TGGTTAAAATTTTGACAT | |
| Eubacterium rectale ATCC 33656 | |||||
| EUBREC_1522 | gap | -78 | 5.2 | TAGTGAAAATTTTAACAA | |
| EUBREC_2002 | pckA | -82 | 5.1 | TTGATTTTTTTTTAACAA | |
| EUBREC_0700 | fba | -78 | 5 | GTGTTAAAAATTTAACTT | |
| EUBREC_2390 | phf1 | -219 | 5.3 | TTGTGAAAAAAATAACAA | |
| EUBREC_2843 | aroE | -98 | 5 | TTGTTAAGTTTTTAACGA | |
| EUBREC_0733 | null | -111 | 5.3 | TTGACAAATTATTAACAA | |
| EUBREC_0733 | null | -54 | 5.4 | TTGTTAAAAAATTAACAG | |
| EUBREC_1058 | pfkA | -18 | 5.3 | ATGATAATTTTTTAACAT | |
| EUBREC_3075 | cat2 | -60 | 5.2 | TTGTTATTTTTTTAACGT | |
| EUBREC_1017 | crt | -91 | 4.8 | TTGACAAAAATTTGTCAA | |
| EUBREC_1967 | rex | -225 | 4.8 | ATGTTAAATTCTTAACAC | |
| Roseburia intestinalis L1-82 | |||||
| ROSINTL182_01942 | gap | -142 | 5.2 | TAGTGAAAAATTTAACAA | |
| ROSINTL182_03172 | bdh | -125 | 5.6 | TTGTTATTTAATTAACAA | |
| ROSINTL182_03866 | pckA | -90 | 5 | TTGACAAAAAAATAACAT | |
| ROSINTL182_02682 | fba | -86 | 5.2 | TTGTTATAAATTTAACTT | |
| ROSINTL182_01690 | aroE | -90 | 5.4 | TTGTTAAGTTTTTAACAA | |
| ROSINTL182_02619 | null | -82 | 5.4 | TTGTTAAAAAATTAACAG | |
| ROSINTL182_02872 | cat2 | -30 | 5.2 | ATGGTAAATTTTTAACAA | |
| ROSINTL182_00883 | crt | -41 | 5.6 | TTGTTAATTTTTTATCAA | |
| ROSINTL182_04859 | rex | -69 | 4.7 | TAGTTAAAAATTTCACAC | |
| Ruminococcus gnavus ATCC 29149 | |||||
| RUMGNA_02651 | adhE | -116 | 4.6 | ATGTTAAAAAGATAACGT | |
| RUMGNA_02651 | adhE | -102 | 4.9 | ACGTTAAATATTTGTCAA | |
| RUMGNA_02651 | adhE | -76 | 5.3 | TTGACAATTATTTAACAA | |
| RUMGNA_02650 | stpK | -181 | 4.8 | AAGTTAAGAAATTAACAA | |
| RUMGNA_01756 | gap | -97 | 4.7 | TTGATGAATCTTTAACAA | |
| RUMGNA_02449 | ladH | -33 | 4.8 | TTGTTAAAATCAAAACAA | |
| RUMGNA_03804 | nadA | -43 | 5.2 | ACGATAAAAATTTAACAA | |
| Ruminococcus lactaris ATCC 29176 | |||||
| RUMLAC_02580 | adhE | -63 | 5.4 | GTGTTAAATTATTAACAA | |
| RUMLAC_02580 | adhE | -37 | 4.9 | TTGACAATTTATTAACGA | |
| RUMLAC_02581 | stpK | -157 | 5.5 | ATGTTAAAAAAATAACAA | |
| RUMLAC_01918 | gap | -96 | 4.6 | TTGATGAATTCTTAACAA | |
| RUMLAC_00614 | ladH | -67 | 4.7 | TTGTTAAAATAAAGACAT | |
| RUMLAC_00224 | aroE | -111 | 4.8 | TTGTTTGATAATTAACAA | |
| RUMLAC_02728 | pfkA | -61 | 4.9 | TTGATAAAAAATAGACAA | |
| RUMLAC_01487 | por | -179 | 5.1 | TTGTGAAAAAATTATCAT | |
|
Regulatory Sites | [ FASTA format ] | DOWNLOAD |