Regulon of TPP in Roseburia intestinalis L1-82
| Regulator type: | RNA regulatory element |
| Name: | TPP |
| RFAM: | RF00059 |
| Regulation mode: | |
| Biological process: | Thiamine biosynthesis |
| Effector: | Thiamine pyrophosphate |
| Regulog: | TPP - Clostridia-3 |
| Under regulation: | |
| - Genes | 5 |
| - Operons | 3 |
Member of regulog collections
- By taxonomy - Clostridia-3
- By RNA motif - TPP
- By effector - Thiamine pyrophosphate
- By pathway - Thiamine biosynthesis
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -550
Score: 71 Sequence: ACAAATGCTAGGGGT...
Locus tag: ROSINTL182_02990
Name: thiT Funciton: Substrate-specific component ThiT of thiamin ECF transporter |
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thiT
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Substrate-specific component ThiT of thiamin ECF transporter
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Position: -121
Score: 59.8 Sequence: GAAAACAACGCAGAG...
Locus tag: ROSINTL182_02889
Name: thiC Funciton: Thiamin biosynthesis protein ThiC |
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thiC
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Thiamin biosynthesis protein ThiC
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Position: -250
Score: 51.6 Sequence: AACAAAAAATGGGGT...
Locus tag: ROSINTL182_02417
Name: thiD Funciton: Phosphomethylpyrimidine kinase (EC 2.7.4.7)
Locus tag: ROSINTL182_02416
Name: cytX Funciton: Predicted hydroxymethylpyrimidine transporter CytX
Locus tag: ROSINTL182_02415
Name: thiW Funciton: Substrate-specific component ThiW of predicted thiazole ECF transporter |
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thiD
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Phosphomethylpyrimidine kinase (EC 2.7.4.7)
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cytX
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Predicted hydroxymethylpyrimidine transporter CytX
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thiW
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Substrate-specific component ThiW of predicted thiazole ECF transporter
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |