Regulon of LiuR in Vibrio angustum S14

Properties
Regulator type:	Transcription factor
TF locus tag:	VAS14_10939
Regulator family:	MerR
Regulation mode:	repressor
Biological process:	Branched-chain amino acid degradation
Effector:
Regulog:	LiuR - Vibrionales
Statistics of regulated genes:
- Genes	11
- Operons	4
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 38 sites [see more]

Member of regulog collections

By trascription factor - LiuR
By taxonomy - Vibrionales
By TF family - MerR
By pathway - Branched-chain amino acid degradation

Regulated operons
	Locus Tag	Name	Function
Position: -55 Score: 5.6 Sequence: ATTTACGTTTACGTCAAC Locus tag: VAS14_11634 Name: etfD Funciton: Electron transfer flavoprotein-ubiquinone oxidoreductase (EC 1.5.5.1)
	VAS14_11634	etfD	Electron transfer flavoprotein-ubiquinone oxidoreductase (EC 1.5.5.1)
Position: -94 Score: 5.6 Sequence: GTTGACGTAAACGTAAAT Locus tag: VAS14_11639 Name: etfB Funciton: Electron transfer flavoprotein, beta subunit Locus tag: VAS14_11644 Name: etfA Funciton: Electron transfer flavoprotein, alpha subunit
	VAS14_11639	etfB	Electron transfer flavoprotein, beta subunit
	VAS14_11644	etfA	Electron transfer flavoprotein, alpha subunit
Position: -115 Score: 5.4 Sequence: ATTTACGTAAACGTTAAG Locus tag: VAS14_10939 Name: liuR Funciton: Predicted transcriptional regulator LiuR of leucine degradation pathway, MerR family Locus tag: VAS14_10934 Name: liuA Funciton: Isovaleryl-CoA dehydrogenase (EC 1.3.99.10) Locus tag: VAS14_10929 Name: liuB Funciton: Methylcrotonyl-CoA carboxylase carboxyl transferase subunit (EC 6.4.1.4) Locus tag: VAS14_10924 Name: liuC Funciton: Methylglutaconyl-CoA hydratase (EC 4.2.1.18) Locus tag: VAS14_10919 Name: liuE Funciton: Hydroxymethylglutaryl-CoA lyase (EC 4.1.3.4)
	VAS14_10939	liuR	Predicted transcriptional regulator LiuR of leucine degradation pathway, MerR family
	VAS14_10934	liuA	Isovaleryl-CoA dehydrogenase (EC 1.3.99.10)
	VAS14_10929	liuB	Methylcrotonyl-CoA carboxylase carboxyl transferase subunit (EC 6.4.1.4)
	VAS14_10924	liuC	Methylglutaconyl-CoA hydratase (EC 4.2.1.18)
	VAS14_10919	liuE	Hydroxymethylglutaryl-CoA lyase (EC 4.1.3.4)
Position: -107 Score: 5.4 Sequence: CTTAACGTTTACGTAAAT Locus tag: VAS14_10944 Name: ivdA Funciton: 3-ketoacyl-CoA thiolase [isoleucine degradation] (EC 2.3.1.16) Locus tag: VAS14_10949 Name: ivdE Funciton: Enoyl-CoA hydratase [valine degradation] (EC 4.2.1.17) / Enoyl-CoA hydratase [isoleucine degradation] (EC 4.2.1.17) Locus tag: VAS14_10954 Name: ivdG Funciton: 3-hydroxyacyl-CoA dehydrogenase [isoleucine degradation] (EC 1.1.1.35)
	VAS14_10944	ivdA	3-ketoacyl-CoA thiolase [isoleucine degradation] (EC 2.3.1.16)
	VAS14_10949	ivdE	Enoyl-CoA hydratase [valine degradation] (EC 4.2.1.17) / Enoyl-CoA hydratase [isoleucine degradation] (EC 4.2.1.17)
	VAS14_10954	ivdG	3-hydroxyacyl-CoA dehydrogenase [isoleucine degradation] (EC 1.1.1.35)

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD