Profile of regulator LiuR in Vibrionales
Properties
| Regulator family: |
MerR |
| Regulation mode: |
repressor |
| Biological process: |
Branched-chain amino acid degradation |
| Effector: |
|
| Regulog: |
LiuR - Vibrionales |
Member of regulog collections
Transcription factor binding sites
|
Locus Tag |
Name |
Position |
Score |
Sequence |
|
Vibrio vulnificus CMCP6
|
|
VV20495 |
liuR |
-112 |
5.9 |
ATTTACGTAAACGTAAAG |
|
VV20474 |
etfB |
-156 |
6 |
GTTGACGTAAACGTAAAC |
|
VV20476 |
etfD |
-82 |
6 |
GTTTACGTTTACGTCAAC |
|
VV20494 |
ivdA |
-72 |
5.7 |
GCTTACGTAAACGTCAAG |
|
VV20494 |
ivdA |
-101 |
5.9 |
CTTTACGTTTACGTAAAT |
|
VV20495 |
liuR |
-141 |
5.7 |
CTTGACGTTTACGTAAGC |
|
Vibrio harveyi ATCC BAA-1116
|
|
VIBHAR_05481 |
liuR |
-141 |
5.9 |
ATTTACGTAAACGTAAAG |
|
VIBHAR_05548 |
etfB |
-193 |
6 |
GTTGACGTAAACGTAAAC |
|
VIBHAR_05481 |
liuR |
-170 |
5.7 |
CTTGACGTTTACGTAAGC |
|
VIBHAR_05546 |
etfD |
-101 |
6 |
GTTTACGTTTACGTCAAC |
|
VIBHAR_05482 |
ivdA |
-149 |
5.7 |
GCTTACGTAAACGTCAAG |
|
VIBHAR_05482 |
ivdA |
-178 |
5.9 |
CTTTACGTTTACGTAAAT |
|
Vibrio parahaemolyticus RIMD 2210633
|
|
VPA1124 |
liuR |
-66 |
5.4 |
GTTTACTTTAACGTTAAC |
|
VPA1124 |
liuR |
-166 |
5.8 |
ATTTACGTTAACGTCAAG |
|
VPA1124 |
liuR |
-195 |
5.1 |
GTTGACGTTTACGTCATA |
|
VPA1156 |
etfB |
-79 |
5.1 |
GTTGATGCAAACGTAAAG |
|
VPA0619 |
liuR |
-129 |
5.7 |
CTTGACGTTTACGTAAGC |
|
VPA0643 |
etfD2 |
-86 |
4.8 |
ATTCACGTTTACGTTAAC |
|
VPA1155 |
etfD1 |
-77 |
5.1 |
CTTTACGTTTGCATCAAC |
|
VPA1153 |
livG |
-110 |
5.6 |
ATTGACGTTTACGTAAAC |
|
VPA1123 |
ivdA2 |
-161 |
5.4 |
GTTAACGTTAAAGTAAAC |
|
VPA0620 |
ivdA1 |
-147 |
5.7 |
GCTTACGTAAACGTCAAG |
|
VPA1123 |
ivdA2 |
-32 |
5.1 |
TATGACGTAAACGTCAAC |
|
VPA1123 |
ivdA2 |
-61 |
5.8 |
CTTGACGTTAACGTAAAT |
|
Vibrio shilonii AK1
|
|
VSAK1_15212 |
etfB |
-74 |
6 |
GTTGACGTAAACGTAAAC |
|
VSAK1_15217 |
etfD |
-94 |
6 |
GTTTACGTTTACGTCAAC |
|
VSAK1_15257 |
ivdA |
-107 |
5.9 |
CTTTACGTTTACGTAAAT |
|
VSAK1_15262 |
liuR |
-155 |
5.9 |
ATTTACGTAAACGTAAAG |
|
Vibrio angustum S14
|
|
VAS14_11639 |
etfB |
-94 |
5.6 |
GTTGACGTAAACGTAAAT |
|
VAS14_11634 |
etfD |
-55 |
5.6 |
ATTTACGTTTACGTCAAC |
|
VAS14_10944 |
ivdA |
-107 |
5.4 |
CTTAACGTTTACGTAAAT |
|
VAS14_10939 |
liuR |
-115 |
5.4 |
ATTTACGTAAACGTTAAG |
|
Photobacterium profundum SS9
|
|
PBPRB1098 |
etfB |
-168 |
5.6 |
GTTGACGTAAACGTAAAT |
|
PBPRB1099 |
etfD |
-66 |
5.6 |
ATTTACGTTTACGTCAAC |
|
PBPRB1112 |
ivdA |
-117 |
5.9 |
CTTTACGTTTACGTAAAT |
|
PBPRB1113 |
liuR |
-203 |
5.7 |
CTTGACGTTTACGTAAGC |
|
PBPRB1112 |
ivdA |
-88 |
5.7 |
GCTTACGTAAACGTCAAG |
|
PBPRB1113 |
liuR |
-174 |
5.9 |
ATTTACGTAAACGTAAAG |
Export
|
Regulatory Sites
|
[ FASTA format ]
|
DOWNLOAD
|
