Regulog PerR - Bacillales
| Regulator type: | Transcription factor |
| Regulator family: | FUR |
| Regulation mode: | repressor |
| Biological process: | Oxidative stress response; Peroxide stress response |
| Effector: | Hydrogen peroxide; Manganese ion, (Mn2+); Iron ion, (Fe2+) |
| Phylum: | Firmicutes |
| Visualization: | |
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Allows to visualize regulog content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Bacillales
- By TF family - FUR
- By effector - Hydrogen peroxide
- By effector - Manganese ion, (Mn2+)
- By effector - Iron ion, (Fe2+)
- By pathway - Oxidative stress response
- By pathway - Peroxide stress response
| Genome | Genes | Operons |
|---|---|---|
| Bacillus subtilis subsp. subtilis str. 168 | 15 | 9 |
| Bacillus amyloliquefaciens FZB42 | 18 | 10 |
| Bacillus pumilus SAFR-032 | 11 | 6 |
| Bacillus licheniformis DSM 13 | 17 | 11 |
| Anoxybacillus flavithermus WK1 | 12 | 8 |
| Geobacillus kaustophilus HTA426 | 10 | 8 |
| Bacillus cereus ATCC 14579 | 17 | 11 |
| Bacillus halodurans C-125 | 11 | 6 |
| Bacillus clausii KSM-K16 | 9 | 4 |
| Oceanobacillus iheyensis HTE831 | 15 | 10 |
| Paenibacillus sp. JDR-2 | 13 | 6 |
| Genes | Function | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| CRON 1. | ||||||||||||
| mrgA |
*
Bacillus subtilis subsp. subtilis str. 168 Site: position = -83 score = 5.96386 sequence = TTATAATTATTATAA Gene: BSU32990: Metalloregulation DNA-binding stress protein |
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Bacillus amyloliquefaciens FZB42 Site: position = -76 score = 5.96386 sequence = TTATAATTATTATAA Gene: RBAM_030100: Metalloregulation DNA-binding stress protein |
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Bacillus licheniformis DSM 13 Site: position = -54 score = 4.28836 sequence = TTGTATTTGTTATAA Site: position = -88 score = 5.74892 sequence = TTAAAATAATTATAA Gene: BLi03480: Metalloregulation DNA-binding stress protein |
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Bacillus cereus ATCC 14579 Site: position = -61 score = 5.85914 sequence = TTATAATGATTATAA Gene: BC5044: Metalloregulation DNA-binding stress protein |
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Metalloregulation DNA-binding stress protein |
| CRON 2. | ||||||||||||
| yybE |
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Bacillus amyloliquefaciens FZB42 Site: position = -57 score = 5.12082 sequence = TTATAATAACTATAG Gene: RBAM_024240: Transcriptional regulator, LysR family |
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Bacillus licheniformis DSM 13 Site: position = -52 score = 4.90997 sequence = TTATAATAACTATCA Gene: BLi02845: Transcriptional regulator, LysR family |
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Transcriptional regulator, LysR family |
| yjdI |
Gene: BSU12060: Hypothetical protein |
Gene: RBAM_024230: Hypothetical protein |
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Anoxybacillus flavithermus WK1 Site: position = -120 score = 4.33771 sequence = AGATAAATATTATAA Gene: Aflv_2797: Hypothetical protein |
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Bacillus cereus ATCC 14579 Site: position = -107 score = 4.18909 sequence = TTATCAATATTTTTA Gene: BC3316: Hypothetical protein |
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Gene: ABC1225: Hypothetical protein |
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Gene: Pjdr2_5527: Hypothetical protein |
Hypothetical protein |
| RBAM_024220 |
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Gene: RBAM_024220: Metal-dependent hydrolase |
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Gene: Aflv_1328: Metal-dependent hydrolase |
Gene: GK1835: Metal-dependent hydrolase |
Gene: BC2201: Metal-dependent hydrolase |
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Bacillus halodurans C-125 Site: position = -114 score = 4.12644 sequence = TGATAAAAACTATAG Gene: BH3116: Metal-dependent hydrolase |
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Gene: Pjdr2_5009: Metal-dependent hydrolase |
Metal-dependent hydrolase |
| CRON 3. | ||||||||||||
| yozI |
*
Bacillus subtilis subsp. subtilis str. 168 Site: position = -54 score = 5.96386 sequence = TTATAATTATTATAA Site: position = -162 score = 4.10926 sequence = GTATAAGTATAATAA Gene: BSU18870: Hypothetical protein |
Gene: RBAM_019290: Hypothetical protein |
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Hypothetical protein |
| CRON 4. | ||||||||||||
| yoaA |
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*
Oceanobacillus iheyensis HTE831 Site: position = -56 score = 5.96386 sequence = TTATAATAATTATAA Gene: OB2645: Uncharacterized N-acetyltransferase |
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Uncharacterized N-acetyltransferase |
| CRON 5. | ||||||||||||
| zosA |
*
Bacillus subtilis subsp. subtilis str. 168 Site: position = -156 score = 5.74892 sequence = TTAAAATAATTATAA Site: position = -179 score = 4.8095 sequence = TGATAATTATTATCA Gene: BSU13850: Zn(2+)-translocating P-type ATPase |
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Bacillus amyloliquefaciens FZB42 Site: position = -154 score = 5.25588 sequence = TTAAAACAATTATAA Site: position = -177 score = 4.8095 sequence = TGATAATTATTATCA Gene: RBAM_013620: Zn(2+)-translocating P-type ATPase |
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Bacillus pumilus SAFR-032 Site: position = -36 score = 4.48983 sequence = TGAAAATCATTATCA Site: position = -156 score = 5.56049 sequence = TTATAATAATTATTA Site: position = -179 score = 4.8095 sequence = TGATAATTATTATCA Gene: BPUM_1275: Zn(2+)-translocating P-type ATPase |
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Bacillus licheniformis DSM 13 Site: position = -200 score = 5.56049 sequence = TTATAATAATTATTA Gene: BLi01593: Zn(2+)-translocating P-type ATPase |
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Bacillus cereus ATCC 14579 Site: position = -127 score = 4.33676 sequence = TAATAACTATTAAAA Site: position = -144 score = 4.57064 sequence = ATAGAATAATTACAA Gene: BC0453: Zn(2+)-translocating P-type ATPase |
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Bacillus halodurans C-125 Site: position = -83 score = 4.31313 sequence = TAATGATGATTATTA Site: position = -189 score = 4.97921 sequence = TTAAAATTATTATTG Site: position = -206 score = 4.37359 sequence = CAATAATTTTTATTA Gene: BH0744: Zn(2+)-translocating P-type ATPase |
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Bacillus clausii KSM-K16 Site: position = -30 score = 4.42856 sequence = TTAAAATAATTGAAA Site: position = -150 score = 4.8095 sequence = TGATAATTATTATCA Gene: ABC3349: Zn(2+)-translocating P-type ATPase |
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Zn(2+)-translocating P-type ATPase |
| CRON 6. | ||||||||||||
| plsC |
Gene: BSU09540: 1-acyl-sn-glycerol-3-phosphate acyltransferase (EC 2.3.1.51) |
*
Bacillus amyloliquefaciens FZB42 Site: position = -87 score = 4.19803 sequence = ATATAATTATTAGTA Site: position = -171 score = 4.12139 sequence = TTAAATTCATTTTCA Gene: RBAM_009770: 1-acyl-sn-glycerol-3-phosphate acyltransferase (EC 2.3.1.51) |
Gene: BPUM_0903: 1-acyl-sn-glycerol-3-phosphate acyltransferase (EC 2.3.1.51) |
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Bacillus licheniformis DSM 13 Site: position = -62 score = 4.22073 sequence = AAAAAATTGTTATAA Gene: BLi01022: 1-acyl-sn-glycerol-3-phosphate acyltransferase (EC 2.3.1.51) |
Gene: Aflv_0158: 1-acyl-sn-glycerol-3-phosphate acyltransferase (EC 2.3.1.51) |
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Bacillus cereus ATCC 14579 Site: position = -57 score = 5.96386 sequence = TTATAATTATTATAA Gene: BC0228: 1-acyl-sn-glycerol-3-phosphate acyltransferase (EC 2.3.1.51) |
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1-acyl-sn-glycerol-3-phosphate acyltransferase (EC 2.3.1.51) |
| CRON 7. | ||||||||||||
| trxB |
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Paenibacillus sp. JDR-2 Site: position = -69 score = 5.29714 sequence = TTGTAATAATTTTAA Gene: Pjdr2_0784: Thioredoxin reductase |
Thioredoxin reductase |
| CRON 8. | ||||||||||||
| spxA |
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Bacillus subtilis subsp. subtilis str. 168 Site: position = -65 score = 4.51076 sequence = TTAGAGTAATTTCAA Gene: BSU11500: Transcriptional regulator |
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Bacillus amyloliquefaciens FZB42 Site: position = -64 score = 4.50077 sequence = TTAAAGTCATTTCAA Site: position = -90 score = 4.28378 sequence = GTATAATACCTATAA Gene: RBAM_011500: Transcriptional regulator |
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Bacillus pumilus SAFR-032 Site: position = -65 score = 4.94621 sequence = TTAGAACAATTTTAA Site: position = -91 score = 4.75065 sequence = GTATAATCACTATAA Gene: BPUM_1077: Transcriptional regulator |
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Bacillus licheniformis DSM 13 Site: position = -62 score = 4.51076 sequence = TTAGAGTTATTTCAA Gene: BLi01238: Transcriptional regulator |
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Anoxybacillus flavithermus WK1 Site: position = -75 score = 4.95254 sequence = TTAAAGTCATTTTAA Gene: Aflv_2127: Transcriptional regulator |
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Geobacillus kaustophilus HTA426 Site: position = -165 score = 4.50077 sequence = TTAAAGTCATTTCAA Gene: GK0817: Transcriptional regulator |
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Bacillus cereus ATCC 14579 Site: position = -181 score = 4.86103 sequence = GTATAATGATTATAG Gene: BC1188: Transcriptional regulator |
Gene: BH2861: Transcriptional regulator |
Gene: ABC2528: Transcriptional regulator |
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Oceanobacillus iheyensis HTE831 Site: position = -72 score = 4.79659 sequence = TTAGACTAATTTTAA Gene: OB1213: Transcriptional regulator |
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Transcriptional regulator |
| CRON 9. | ||||||||||||
| ypzK |
Gene: BSU23240: GCN5-related N-acetyltransferase (GNAT) domain protein |
Gene: RBAM_021380: GCN5-related N-acetyltransferase (GNAT) domain protein |
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Bacillus pumilus SAFR-032 Site: position = -85 score = 4.82363 sequence = TAAAAATGTTTATAA Gene: BPUM_2058: GCN5-related N-acetyltransferase (GNAT) domain protein |
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Bacillus licheniformis DSM 13 Site: position = -74 score = 4.82363 sequence = TAAAAATGTTTATAA Gene: BLi02471: GCN5-related N-acetyltransferase (GNAT) domain protein |
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Anoxybacillus flavithermus WK1 Site: position = -86 score = 4.05694 sequence = TTAAAAAATGTTTAA Gene: Aflv_1019: GCN5-related N-acetyltransferase (GNAT) domain protein |
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Geobacillus kaustophilus HTA426 Site: position = -83 score = 4.55509 sequence = TGAGAATGTTTATAA Gene: GK2293: GCN5-related N-acetyltransferase (GNAT) domain protein |
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Bacillus cereus ATCC 14579 Site: position = -30 score = 4.01219 sequence = TTGTAACTTTTGTAA Site: position = -87 score = 4.29028 sequence = TTGAAAATATTGTAA Gene: BC4060: GCN5-related N-acetyltransferase (GNAT) domain protein |
Gene: BH1558: GCN5-related N-acetyltransferase (GNAT) domain protein |
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Oceanobacillus iheyensis HTE831 Site: position = -136 score = 5.01153 sequence = TTATACTAATTCTAA Gene: OB1830: GCN5-related N-acetyltransferase (GNAT) domain protein |
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GCN5-related N-acetyltransferase (GNAT) domain protein |
| CRON 10. | ||||||||||||
| yeiH |
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Gene: RBAM_034840: Putative membrane protein YeiH |
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Geobacillus kaustophilus HTA426 Site: position = -88 score = 4.89544 sequence = TTATAAAAATAATAA Gene: GK0890: Putative membrane protein YeiH |
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Bacillus cereus ATCC 14579 Site: position = -81 score = 4.73993 sequence = TTAAACTTATTATAG Gene: BC5174: Putative membrane protein YeiH |
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Oceanobacillus iheyensis HTE831 Site: position = -37 score = 4.58854 sequence = CTATACTAATTATAG Site: position = -85 score = 4.58551 sequence = TAATAAGTATTATTA Gene: OB3406: Putative membrane protein YeiH |
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Paenibacillus sp. JDR-2 Site: position = -91 score = 5.96386 sequence = TTATAATTATTATAA Gene: Pjdr2_5937: Putative membrane protein YeiH |
Putative membrane protein YeiH |
| CRON 11. | ||||||||||||
| perR |
*
Bacillus subtilis subsp. subtilis str. 168 Site: position = -34 score = 4.2153 sequence = TAAGAATTTTTTTTA Site: position = -51 score = 4.99017 sequence = TTATAAACATTACAA Gene: BSU08730: Transcriptional regulator of peroxide stress response, Fur family |
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Bacillus amyloliquefaciens FZB42 Site: position = -34 score = 4.42025 sequence = TAATAATCTTTTTTA Site: position = -51 score = 5.44195 sequence = TTATAAACATTATAA Gene: RBAM_008820: Transcriptional regulator of peroxide stress response, Fur family |
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Bacillus pumilus SAFR-032 Site: position = -50 score = 5.44195 sequence = TTATAAAGATTATAA Gene: BPUM_0827: Transcriptional regulator of peroxide stress response, Fur family |
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Bacillus licheniformis DSM 13 Site: position = -33 score = 4.2153 sequence = TAAGAATTTTTTTTA Site: position = -50 score = 4.94891 sequence = TTATAAACGTTATAA Gene: BLi00900: Transcriptional regulator of peroxide stress response, Fur family |
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Anoxybacillus flavithermus WK1 Site: position = -15 score = 5.54667 sequence = TTATAATTTTTATAA Site: position = -38 score = 5.54667 sequence = TTATAAAAATTATAA Gene: Aflv_0369: Transcriptional regulator of peroxide stress response, Fur family |
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Geobacillus kaustophilus HTA426 Site: position = -44 score = 4.17736 sequence = TGATAATTTTTTTCA Site: position = -61 score = 5.54667 sequence = TTATAAATATTATAA Gene: GK0478: Transcriptional regulator of peroxide stress response, Fur family |
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Bacillus cereus ATCC 14579 Site: position = -43 score = 5.39226 sequence = TTATAAGAATTATAA Gene: BC0518: Transcriptional regulator of peroxide stress response, Fur family |
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Bacillus halodurans C-125 Site: position = -54 score = 5.44195 sequence = TTATAAAGATTATAA Gene: BH0951: Transcriptional regulator of peroxide stress response, Fur family |
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Bacillus clausii KSM-K16 Site: position = -50 score = 5.23318 sequence = TTATAATTAATATAA Gene: ABC1322: Transcriptional regulator of peroxide stress response, Fur family |
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Oceanobacillus iheyensis HTE831 Site: position = -49 score = 4.27712 sequence = TAATAATTTTATTAA Site: position = -66 score = 5.28754 sequence = TTATAAGGATTATAA Gene: OB0905: Transcriptional regulator of peroxide stress response, Fur family |
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Paenibacillus sp. JDR-2 Site: position = -209 score = 4.07431 sequence = TTGGAAGCATTACAA Gene: Pjdr2_1094: Transcriptional regulator of peroxide stress response, Fur family |
Transcriptional regulator of peroxide stress response, Fur family |
| CRON 12. | ||||||||||||
| OB0178 |
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Oceanobacillus iheyensis HTE831 Site: position = -57 score = 5.48715 sequence = TTATAATAACTATAA Gene: OB0178: hypothetical protein |
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Hypothetical protein |
| OB0179 |
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Gene: OB0179: Hypothetical protein |
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Hypothetical protein |
| CRON 13. | ||||||||||||
| katA |
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Bacillus subtilis subsp. subtilis str. 168 Site: position = -78 score = 5.96386 sequence = TTATAATAATTATAA Gene: BSU08820: Catalase (EC 1.11.1.6) |
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Bacillus amyloliquefaciens FZB42 Site: position = -78 score = 5.85914 sequence = TTATAATCATTATAA Gene: RBAM_009090: Catalase (EC 1.11.1.6) |
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Bacillus licheniformis DSM 13 Site: position = -87 score = 5.96386 sequence = TTATAATAATTATAA Gene: BLi04113: Catalase (EC 1.11.1.6) |
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Oceanobacillus iheyensis HTE831 Site: position = -98 score = 5.15925 sequence = TTAAAATAATTGTAA Gene: OB0633: Catalase (EC 1.11.1.6) |
Gene: Pjdr2_5427: Catalase (EC 1.11.1.6) |
Catalase (EC 1.11.1.6) |
| CRON 14. | ||||||||||||
| hemA |
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Bacillus subtilis subsp. subtilis str. 168 Site: position = -49 score = 5.54946 sequence = TTAGAATGATTATAA Site: position = -79 score = 5.96386 sequence = TTATAATTATTATAA Gene: BSU28170: Glutamyl-tRNA reductase (EC 1.2.1.70) |
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Bacillus amyloliquefaciens FZB42 Site: position = -39 score = 5.54946 sequence = TTAGAATGATTATAA Site: position = -69 score = 5.85914 sequence = TTATAATCATTATAA Gene: RBAM_025230: Glutamyl-tRNA reductase (EC 1.2.1.70) |
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Bacillus pumilus SAFR-032 Site: position = -49 score = 5.51209 sequence = TTGTAATTATTATAA Site: position = -79 score = 5.85914 sequence = TTATAATCATTATAA Gene: BPUM_2458: Glutamyl-tRNA reductase (EC 1.2.1.70) |
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Bacillus licheniformis DSM 13 Site: position = -48 score = 5.54946 sequence = TTATAATCATTCTAA Site: position = -78 score = 4.42765 sequence = TTATAATCGTTTTGA Gene: BLi02947: Glutamyl-tRNA reductase (EC 1.2.1.70) |
Gene: Aflv_0605: Glutamyl-tRNA reductase (EC 1.2.1.70) |
Gene: GK2647: Glutamyl-tRNA reductase (EC 1.2.1.70) |
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Bacillus cereus ATCC 14579 Site: position = -175 score = 5.85914 sequence = TTATAATCATTATAA Gene: BC4473: Glutamyl-tRNA reductase (EC 1.2.1.70) |
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Bacillus halodurans C-125 Site: position = -83 score = 4.1013 sequence = TTAGACATGTTATAA Site: position = -249 score = 5.25081 sequence = TAATAATAATTCTAA Gene: BH3048: Glutamyl-tRNA reductase (EC 1.2.1.70) |
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Bacillus clausii KSM-K16 Site: position = -93 score = 4.1013 sequence = TTAGACATGTTATAA Gene: ABC2632: Glutamyl-tRNA reductase (EC 1.2.1.70) |
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Oceanobacillus iheyensis HTE831 Site: position = -49 score = 5.09769 sequence = TTATAATAATATTAA Site: position = -66 score = 4.8298 sequence = TTATAATAAATATTA Gene: OB2070: Glutamyl-tRNA reductase (EC 1.2.1.70) |
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Paenibacillus sp. JDR-2 Site: position = -47 score = 5.54946 sequence = TTATAATCATTCTAA Gene: Pjdr2_4440: Glutamyl-tRNA reductase (EC 1.2.1.70) |
Glutamyl-tRNA reductase (EC 1.2.1.70) |
| hemX |
Gene: BSU28160: HemX protein, negative effector of steady-state concentration of glutamyl-tRNA reductase |
Gene: RBAM_025220: HemX protein, negative effector of steady-state concentration of glutamyl-tRNA reductase |
Gene: BPUM_2457: HemX protein, negative effector of steady-state concentration of glutamyl-tRNA reductase |
Gene: BLi02946: HemX protein, negative effector of steady-state concentration of glutamyl-tRNA reductase |
Gene: Aflv_0606: HemX protein, negative effector of steady-state concentration of glutamyl-tRNA reductase |
Gene: GK2646: HemX protein, negative effector of steady-state concentration of glutamyl-tRNA reductase |
Gene: BC4472: HemX protein, negative effector of steady-state concentration of glutamyl-tRNA reductase |
Gene: BH3047: HemX protein, negative effector of steady-state concentration of glutamyl-tRNA reductase |
Gene: ABC2631: HemX protein, negative effector of steady-state concentration of glutamyl-tRNA reductase |
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Oceanobacillus iheyensis HTE831 Site: position = -43 score = 4.42818 sequence = TTGAAAAAATTACAA Site: position = -250 score = 4.00424 sequence = CAAAAAGTATTATTA Gene: OB2069: HemX protein, negative effector of steady-state concentration of glutamyl-tRNA reductase |
Gene: Pjdr2_4439: HemX protein, negative effector of steady-state concentration of glutamyl-tRNA reductase |
HemX protein, negative effector of steady-state concentration of glutamyl-tRNA reductase |
| Pjdr2_4438 |
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Gene: Pjdr2_4438: Siroheme synthase |
Siroheme synthase |
| hemC |
Gene: BSU28150: Porphobilinogen deaminase (EC 2.5.1.61) |
Gene: RBAM_025210: Porphobilinogen deaminase (EC 2.5.1.61) |
Gene: BPUM_2456: Porphobilinogen deaminase (EC 2.5.1.61) |
Gene: BLi02945: Porphobilinogen deaminase (EC 2.5.1.61) |
Gene: Aflv_0607: Porphobilinogen deaminase (EC 2.5.1.61) |
Gene: GK2645: Porphobilinogen deaminase (EC 2.5.1.61) |
Gene: BC4471: Porphobilinogen deaminase (EC 2.5.1.61) |
Gene: BH3046: Porphobilinogen deaminase (EC 2.5.1.61) |
Gene: ABC2630: Porphobilinogen deaminase (EC 2.5.1.61) |
Gene: OB2068: Porphobilinogen deaminase (EC 2.5.1.61) |
Gene: Pjdr2_4437: Porphobilinogen deaminase (EC 2.5.1.61) |
Porphobilinogen deaminase (EC 2.5.1.61) |
| hemD |
Gene: BSU28140: Uroporphyrinogen-III synthase (EC 4.2.1.75) |
Gene: RBAM_025200: Uroporphyrinogen-III synthase (EC 4.2.1.75) |
Gene: BPUM_2455: Uroporphyrinogen-III synthase (EC 4.2.1.75) |
Gene: BLi02944: Uroporphyrinogen-III synthase (EC 4.2.1.75) |
Gene: Aflv_0608: Uroporphyrinogen-III synthase (EC 4.2.1.75) |
Gene: GK2644: Uroporphyrinogen-III synthase (EC 4.2.1.75) |
Gene: BC4470: Uroporphyrinogen-III synthase (EC 4.2.1.75) |
Gene: BH3045: Uroporphyrinogen-III synthase (EC 4.2.1.75) |
Gene: ABC2629: Uroporphyrinogen-III synthase (EC 4.2.1.75) |
Gene: OB2067: Uroporphyrinogen-III synthase (EC 4.2.1.75) |
Gene: Pjdr2_4436: Uroporphyrinogen-III synthase (EC 4.2.1.75) |
Uroporphyrinogen-III synthase (EC 4.2.1.75) |
| hemB |
Gene: BSU28130: Delta-aminolevulinic acid dehydratase (EC 4.2.1.24) |
Gene: RBAM_025190: Delta-aminolevulinic acid dehydratase (EC 4.2.1.24) |
Gene: BPUM_2454: Delta-aminolevulinic acid dehydratase (EC 4.2.1.24) |
Gene: BLi02943: Delta-aminolevulinic acid dehydratase (EC 4.2.1.24) |
Gene: Aflv_0609: Delta-aminolevulinic acid dehydratase (EC 4.2.1.24) |
Gene: GK2643: Delta-aminolevulinic acid dehydratase (EC 4.2.1.24) |
Gene: BC4469: Delta-aminolevulinic acid dehydratase (EC 4.2.1.24) |
Gene: BH3044: Delta-aminolevulinic acid dehydratase (EC 4.2.1.24) |
Gene: ABC2628: Delta-aminolevulinic acid dehydratase (EC 4.2.1.24) |
Gene: OB2066: Delta-aminolevulinic acid dehydratase (EC 4.2.1.24) |
Gene: Pjdr2_4435: Delta-aminolevulinic acid dehydratase (EC 4.2.1.24) |
Delta-aminolevulinic acid dehydratase (EC 4.2.1.24) |
| hemL |
Gene: BSU28120: Glutamate-1-semialdehyde aminotransferase (EC 5.4.3.8) |
Gene: RBAM_025180: Glutamate-1-semialdehyde aminotransferase (EC 5.4.3.8) |
Gene: BPUM_2453: Glutamate-1-semialdehyde aminotransferase (EC 5.4.3.8) |
Gene: BLi02942: Glutamate-1-semialdehyde aminotransferase (EC 5.4.3.8) |
Gene: Aflv_0610: Glutamate-1-semialdehyde aminotransferase (EC 5.4.3.8) |
Gene: GK2642: Glutamate-1-semialdehyde aminotransferase (EC 5.4.3.8) |
Gene: BC4468: Glutamate-1-semialdehyde aminotransferase (EC 5.4.3.8) |
Gene: BH3043: Glutamate-1-semialdehyde aminotransferase (EC 5.4.3.8) |
Gene: ABC2627: Glutamate-1-semialdehyde aminotransferase (EC 5.4.3.8) |
Gene: OB2065: Glutamate-1-semialdehyde aminotransferase (EC 5.4.3.8) |
Gene: Pjdr2_4434: Glutamate-1-semialdehyde aminotransferase (EC 5.4.3.8) |
Glutamate-1-semialdehyde aminotransferase (EC 5.4.3.8) |
| yhcT |
Gene: BSU09210: Putative RNA pseudouridine synthase |
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Gene: BLi00984: Putative RNA pseudouridine synthase |
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Gene: Pjdr2_4433: Putative RNA pseudouridine synthase |
Putative RNA pseudouridine synthase |
| CRON 15. | ||||||||||||
| Aflv_0994 |
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*2
Anoxybacillus flavithermus WK1 Gene: Aflv_0994: Transposase Site: position = -196 score = 5.01242 sequence = TTATAATCATTTTAT Site: position = -219 score = 4.60905 sequence = TAATAATCATTTTAT Site: position = -236 score = 4.3104 sequence = GAAAAATAATTATTA Gene: Aflv_0993: Transposase |
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Transposase |
| fur |
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Bacillus subtilis subsp. subtilis str. 168 Site: position = -76 score = 5.59753 sequence = TTATAATAATTATAG Site: position = -116 score = 5.24082 sequence = TTAAAATCATTATTA Gene: BSU23520: Transcriptional regulator for iron transport and metabolism |
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Bacillus amyloliquefaciens FZB42 Site: position = -76 score = 5.59753 sequence = TTATAATAATTATAG Site: position = -116 score = 4.97228 sequence = TTAGAATGATTATCA Gene: RBAM_021640: Transcriptional regulator for iron transport and metabolism |
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Bacillus pumilus SAFR-032 Site: position = -76 score = 5.27786 sequence = TTAAAATGATTATAG Site: position = -116 score = 4.96272 sequence = TTATAATCGTTATTA Gene: BPUM_2084: Transcriptional regulator for iron transport and metabolism |
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Bacillus licheniformis DSM 13 Site: position = -77 score = 5.4928 sequence = TTATAATGATTATAG Site: position = -117 score = 5.45576 sequence = TTATAATGATTATTA Gene: BLi02503: Transcriptional regulator for iron transport and metabolism |
Gene: Aflv_0995: Transcriptional regulator for iron transport and metabolism |
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Geobacillus kaustophilus HTA426 Site: position = -77 score = 4.13234 sequence = TAATAGTGATTTTAC Site: position = -100 score = 4.38554 sequence = TAATAACCATTATCA Gene: GK2317: Transcriptional regulator for iron transport and metabolism |
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Bacillus cereus ATCC 14579 Site: position = -99 score = 4.49982 sequence = TGAGAATAATTATCA Gene: BC4091: Transcriptional regulator for iron transport and metabolism |
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Bacillus halodurans C-125 Site: position = -77 score = 5.05239 sequence = TAATAATCATTATTA Site: position = -101 score = 4.35153 sequence = TAATAATAATTATCT Site: position = -118 score = 4.33676 sequence = TTATAACAAATATTA Gene: BH1527: Transcriptional regulator for iron transport and metabolism |
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Bacillus clausii KSM-K16 Site: position = -83 score = 4.69431 sequence = TTGGAATCATTATTA Site: position = -124 score = 4.89274 sequence = TTAGAATAATTCCAA Gene: ABC1780: Transcriptional regulator for iron transport and metabolism |
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Oceanobacillus iheyensis HTE831 Site: position = -94 score = 5.96386 sequence = TTATAATTATTATAA Gene: OB1849: Transcriptional regulator for iron transport and metabolism |
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Paenibacillus sp. JDR-2 Site: position = -75 score = 5.54946 sequence = TTATAATCATTCTAA Site: position = -91 score = 5.65419 sequence = TTATAATTATTCTAA Site: position = -117 score = 4.14105 sequence = GTGTAATAATGATAA Gene: Pjdr2_1270: Transcriptional regulator for iron transport and metabolism |
Transcriptional regulator for iron transport and metabolism |
| CRON 16. | ||||||||||||
| czcD |
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Anoxybacillus flavithermus WK1 Site: position = -57 score = 5.08378 sequence = TTATAGTAATTATTA Gene: Aflv_0372: Co/Zn/Cd efflux system component |
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Geobacillus kaustophilus HTA426 Site: position = -31 score = 5.38668 sequence = TGATAATTATTATAA Gene: GK2881: Co/Zn/Cd efflux system component |
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Paenibacillus sp. JDR-2 Site: position = -37 score = 5.54946 sequence = TTATAATCATTCTAA Gene: Pjdr2_4210: Co/Zn/Cd efflux system component |
Co/Zn/Cd efflux system component |
| CRON 17. | ||||||||||||
| yxbB |
Gene: BSU39890: SAM-dependent methyltransferase (EC 2.1.1.-) |
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Bacillus halodurans C-125 Site: position = -55 score = 5.54946 sequence = TTAGAATCATTATAA Gene: BH1951: SAM-dependent methyltransferase (EC 2.1.1.-) |
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SAM-dependent methyltransferase (EC 2.1.1.-) |
| CRON 18. | ||||||||||||
| ahpC |
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Bacillus subtilis subsp. subtilis str. 168 Site: position = -60 score = 4.88448 sequence = TTAGAATTATTATTG Gene: BSU40090: Alkyl hydroperoxide reductase protein C (EC 1.6.4.-) |
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Bacillus amyloliquefaciens FZB42 Site: position = -79 score = 4.88448 sequence = TTAGAATTATTATTG Gene: RBAM_036960: Alkyl hydroperoxide reductase protein C (EC 1.6.4.-) |
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Bacillus licheniformis DSM 13 Site: position = -70 score = 5.59753 sequence = TTATAATAATTATAG Gene: BLi04291: Alkyl hydroperoxide reductase protein C (EC 1.6.4.-) |
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Anoxybacillus flavithermus WK1 Site: position = -100 score = 5.47082 sequence = TTATAATTGTTATAA Gene: Aflv_2773: Alkyl hydroperoxide reductase protein C (EC 1.6.4.-) |
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Geobacillus kaustophilus HTA426 Site: position = -44 score = 5.74892 sequence = TTAAAATTATTATAA Gene: GK2575: Alkyl hydroperoxide reductase protein C (EC 1.6.4.-) |
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Bacillus cereus ATCC 14579 Site: position = -88 score = 5.28785 sequence = TTAGAATTATTATAG Gene: BC0377: Alkyl hydroperoxide reductase protein C (EC 1.6.4.-) |
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Alkyl hydroperoxide reductase protein C (EC 1.6.4.-) |
| ahpF |
Gene: BSU40100: Alkyl hydroperoxide reductase protein F (EC 1.6.4.-) |
Gene: RBAM_036970: Alkyl hydroperoxide reductase protein F (EC 1.6.4.-) |
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Gene: BLi04292: Alkyl hydroperoxide reductase protein F (EC 1.6.4.-) |
Gene: Aflv_2772: Alkyl hydroperoxide reductase protein F (EC 1.6.4.-) |
Gene: GK2574: Alkyl hydroperoxide reductase protein F (EC 1.6.4.-) |
Gene: BC0376: Alkyl hydroperoxide reductase protein F (EC 1.6.4.-) |
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Alkyl hydroperoxide reductase protein F (EC 1.6.4.-) |
| CRON 19. | ||||||||||||
| Aflv_2437 |
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Anoxybacillus flavithermus WK1 Site: position = -50 score = 4.88031 sequence = ATGTAATAATTATAA Gene: Aflv_2437: Hypothetical protein |
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Geobacillus kaustophilus HTA426 Site: position = -50 score = 4.88031 sequence = ATGTAATAATTATAA Gene: GKP11: Hypothetical protein |
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Hypothetical protein |
| Aflv_2436 |
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Gene: Aflv_2436: Predicted Zn peptidase |
Gene: GKP10: Predicted Zn peptidase |
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Predicted Zn peptidase |
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |