Regulog PerR - Bacillales

Properties
Regulator type:	Transcription factor
Regulator family:	FUR
Regulation mode:	repressor
Biological process:	Oxidative stress response; Peroxide stress response
Effector:	Hydrogen peroxide; Manganese ion, (Mn2+); Iron ion, (Fe2+)
Phylum:	Firmicutes
Visualization:
	Allows to visualize regulog content in the context of metabolic pathways

Built upon 129 sites [see more]

Member of regulog collections

By taxonomy - Bacillales
By TF family - FUR
By effector - Hydrogen peroxide
By effector - Manganese ion, (Mn2+)
By effector - Iron ion, (Fe2+)
By pathway - Oxidative stress response
By pathway - Peroxide stress response

Statistics of regulated genes
Genome	Genes	Operons
Bacillus subtilis subsp. subtilis str. 168	15	9
Bacillus amyloliquefaciens FZB42	18	10
Bacillus pumilus SAFR-032	11	6
Bacillus licheniformis DSM 13	17	11
Anoxybacillus flavithermus WK1	12	8
Geobacillus kaustophilus HTA426	10	8
Bacillus cereus ATCC 14579	17	11
Bacillus halodurans C-125	11	6
Bacillus clausii KSM-K16	9	4
Oceanobacillus iheyensis HTE831	15	10
Paenibacillus sp. JDR-2	13	6

Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes												Function

CRON 1.
mrgA	* Bacillus subtilis subsp. subtilis str. 168 Site: position = -83 score = 5.96386 sequence = TTATAATTATTATAA Gene: BSU32990: Metalloregulation DNA-binding stress protein	* Bacillus amyloliquefaciens FZB42 Site: position = -76 score = 5.96386 sequence = TTATAATTATTATAA Gene: RBAM_030100: Metalloregulation DNA-binding stress protein	Bacillus pumilus SAFR-032	* Bacillus licheniformis DSM 13 Site: position = -54 score = 4.28836 sequence = TTGTATTTGTTATAA Site: position = -88 score = 5.74892 sequence = TTAAAATAATTATAA Gene: BLi03480: Metalloregulation DNA-binding stress protein	Anoxybacillus flavithermus WK1	Geobacillus kaustophilus HTA426	* Bacillus cereus ATCC 14579 Site: position = -61 score = 5.85914 sequence = TTATAATGATTATAA Gene: BC5044: Metalloregulation DNA-binding stress protein	Bacillus halodurans C-125	Bacillus clausii KSM-K16	Oceanobacillus iheyensis HTE831	Paenibacillus sp. JDR-2	Metalloregulation DNA-binding stress protein

CRON 2.
yybE	Bacillus subtilis subsp. subtilis str. 168	* Bacillus amyloliquefaciens FZB42 Site: position = -57 score = 5.12082 sequence = TTATAATAACTATAG Gene: RBAM_024240: Transcriptional regulator, LysR family	Bacillus pumilus SAFR-032	* Bacillus licheniformis DSM 13 Site: position = -52 score = 4.90997 sequence = TTATAATAACTATCA Gene: BLi02845: Transcriptional regulator, LysR family	Anoxybacillus flavithermus WK1	Geobacillus kaustophilus HTA426	Bacillus cereus ATCC 14579	Bacillus halodurans C-125	Bacillus clausii KSM-K16	Oceanobacillus iheyensis HTE831	Paenibacillus sp. JDR-2	Transcriptional regulator, LysR family
yjdI	Bacillus subtilis subsp. subtilis str. 168 Gene: BSU12060: Hypothetical protein	Bacillus amyloliquefaciens FZB42 Gene: RBAM_024230: Hypothetical protein	Bacillus pumilus SAFR-032	Bacillus licheniformis DSM 13	* Anoxybacillus flavithermus WK1 Site: position = -120 score = 4.33771 sequence = AGATAAATATTATAA Gene: Aflv_2797: Hypothetical protein	Geobacillus kaustophilus HTA426	* Bacillus cereus ATCC 14579 Site: position = -107 score = 4.18909 sequence = TTATCAATATTTTTA Gene: BC3316: Hypothetical protein	Bacillus halodurans C-125	Bacillus clausii KSM-K16 Gene: ABC1225: Hypothetical protein	Oceanobacillus iheyensis HTE831	Paenibacillus sp. JDR-2 Gene: Pjdr2_5527: Hypothetical protein	Hypothetical protein
RBAM_024220	Bacillus subtilis subsp. subtilis str. 168	Bacillus amyloliquefaciens FZB42 Gene: RBAM_024220: Metal-dependent hydrolase	Bacillus pumilus SAFR-032	Bacillus licheniformis DSM 13	Anoxybacillus flavithermus WK1 Gene: Aflv_1328: Metal-dependent hydrolase	Geobacillus kaustophilus HTA426 Gene: GK1835: Metal-dependent hydrolase	Bacillus cereus ATCC 14579 Gene: BC2201: Metal-dependent hydrolase	* Bacillus halodurans C-125 Site: position = -114 score = 4.12644 sequence = TGATAAAAACTATAG Gene: BH3116: Metal-dependent hydrolase	Bacillus clausii KSM-K16	Oceanobacillus iheyensis HTE831	Paenibacillus sp. JDR-2 Gene: Pjdr2_5009: Metal-dependent hydrolase	Metal-dependent hydrolase

CRON 3.
yozI	* Bacillus subtilis subsp. subtilis str. 168 Site: position = -54 score = 5.96386 sequence = TTATAATTATTATAA Site: position = -162 score = 4.10926 sequence = GTATAAGTATAATAA Gene: BSU18870: Hypothetical protein	Bacillus amyloliquefaciens FZB42 Gene: RBAM_019290: Hypothetical protein	Bacillus pumilus SAFR-032	Bacillus licheniformis DSM 13	Anoxybacillus flavithermus WK1	Geobacillus kaustophilus HTA426	Bacillus cereus ATCC 14579	Bacillus halodurans C-125	Bacillus clausii KSM-K16	Oceanobacillus iheyensis HTE831	Paenibacillus sp. JDR-2	Hypothetical protein

CRON 4.
yoaA	Bacillus subtilis subsp. subtilis str. 168	Bacillus amyloliquefaciens FZB42	Bacillus pumilus SAFR-032	Bacillus licheniformis DSM 13	Anoxybacillus flavithermus WK1	Geobacillus kaustophilus HTA426	Bacillus cereus ATCC 14579	Bacillus halodurans C-125	Bacillus clausii KSM-K16	* Oceanobacillus iheyensis HTE831 Site: position = -56 score = 5.96386 sequence = TTATAATAATTATAA Gene: OB2645: Uncharacterized N-acetyltransferase	Paenibacillus sp. JDR-2	Uncharacterized N-acetyltransferase

CRON 5.
zosA	* Bacillus subtilis subsp. subtilis str. 168 Site: position = -156 score = 5.74892 sequence = TTAAAATAATTATAA Site: position = -179 score = 4.8095 sequence = TGATAATTATTATCA Gene: BSU13850: Zn(2+)-translocating P-type ATPase	* Bacillus amyloliquefaciens FZB42 Site: position = -154 score = 5.25588 sequence = TTAAAACAATTATAA Site: position = -177 score = 4.8095 sequence = TGATAATTATTATCA Gene: RBAM_013620: Zn(2+)-translocating P-type ATPase	* Bacillus pumilus SAFR-032 Site: position = -36 score = 4.48983 sequence = TGAAAATCATTATCA Site: position = -156 score = 5.56049 sequence = TTATAATAATTATTA Site: position = -179 score = 4.8095 sequence = TGATAATTATTATCA Gene: BPUM_1275: Zn(2+)-translocating P-type ATPase	* Bacillus licheniformis DSM 13 Site: position = -200 score = 5.56049 sequence = TTATAATAATTATTA Gene: BLi01593: Zn(2+)-translocating P-type ATPase	Anoxybacillus flavithermus WK1	Geobacillus kaustophilus HTA426	* Bacillus cereus ATCC 14579 Site: position = -127 score = 4.33676 sequence = TAATAACTATTAAAA Site: position = -144 score = 4.57064 sequence = ATAGAATAATTACAA Gene: BC0453: Zn(2+)-translocating P-type ATPase	* Bacillus halodurans C-125 Site: position = -83 score = 4.31313 sequence = TAATGATGATTATTA Site: position = -189 score = 4.97921 sequence = TTAAAATTATTATTG Site: position = -206 score = 4.37359 sequence = CAATAATTTTTATTA Gene: BH0744: Zn(2+)-translocating P-type ATPase	* Bacillus clausii KSM-K16 Site: position = -30 score = 4.42856 sequence = TTAAAATAATTGAAA Site: position = -150 score = 4.8095 sequence = TGATAATTATTATCA Gene: ABC3349: Zn(2+)-translocating P-type ATPase	Oceanobacillus iheyensis HTE831	Paenibacillus sp. JDR-2	Zn(2+)-translocating P-type ATPase

CRON 6.
plsC	Bacillus subtilis subsp. subtilis str. 168 Gene: BSU09540: 1-acyl-sn-glycerol-3-phosphate acyltransferase (EC 2.3.1.51)	* Bacillus amyloliquefaciens FZB42 Site: position = -87 score = 4.19803 sequence = ATATAATTATTAGTA Site: position = -171 score = 4.12139 sequence = TTAAATTCATTTTCA Gene: RBAM_009770: 1-acyl-sn-glycerol-3-phosphate acyltransferase (EC 2.3.1.51)	Bacillus pumilus SAFR-032 Gene: BPUM_0903: 1-acyl-sn-glycerol-3-phosphate acyltransferase (EC 2.3.1.51)	* Bacillus licheniformis DSM 13 Site: position = -62 score = 4.22073 sequence = AAAAAATTGTTATAA Gene: BLi01022: 1-acyl-sn-glycerol-3-phosphate acyltransferase (EC 2.3.1.51)	Anoxybacillus flavithermus WK1 Gene: Aflv_0158: 1-acyl-sn-glycerol-3-phosphate acyltransferase (EC 2.3.1.51)	Geobacillus kaustophilus HTA426	* Bacillus cereus ATCC 14579 Site: position = -57 score = 5.96386 sequence = TTATAATTATTATAA Gene: BC0228: 1-acyl-sn-glycerol-3-phosphate acyltransferase (EC 2.3.1.51)	Bacillus halodurans C-125	Bacillus clausii KSM-K16	Oceanobacillus iheyensis HTE831	Paenibacillus sp. JDR-2	1-acyl-sn-glycerol-3-phosphate acyltransferase (EC 2.3.1.51)

CRON 7.
trxB	Bacillus subtilis subsp. subtilis str. 168	Bacillus amyloliquefaciens FZB42	Bacillus pumilus SAFR-032	Bacillus licheniformis DSM 13	Anoxybacillus flavithermus WK1	Geobacillus kaustophilus HTA426	Bacillus cereus ATCC 14579	Bacillus halodurans C-125	Bacillus clausii KSM-K16	Oceanobacillus iheyensis HTE831	* Paenibacillus sp. JDR-2 Site: position = -69 score = 5.29714 sequence = TTGTAATAATTTTAA Gene: Pjdr2_0784: Thioredoxin reductase	Thioredoxin reductase

CRON 8.
spxA	* Bacillus subtilis subsp. subtilis str. 168 Site: position = -65 score = 4.51076 sequence = TTAGAGTAATTTCAA Gene: BSU11500: Transcriptional regulator	* Bacillus amyloliquefaciens FZB42 Site: position = -64 score = 4.50077 sequence = TTAAAGTCATTTCAA Site: position = -90 score = 4.28378 sequence = GTATAATACCTATAA Gene: RBAM_011500: Transcriptional regulator	* Bacillus pumilus SAFR-032 Site: position = -65 score = 4.94621 sequence = TTAGAACAATTTTAA Site: position = -91 score = 4.75065 sequence = GTATAATCACTATAA Gene: BPUM_1077: Transcriptional regulator	* Bacillus licheniformis DSM 13 Site: position = -62 score = 4.51076 sequence = TTAGAGTTATTTCAA Gene: BLi01238: Transcriptional regulator	* Anoxybacillus flavithermus WK1 Site: position = -75 score = 4.95254 sequence = TTAAAGTCATTTTAA Gene: Aflv_2127: Transcriptional regulator	* Geobacillus kaustophilus HTA426 Site: position = -165 score = 4.50077 sequence = TTAAAGTCATTTCAA Gene: GK0817: Transcriptional regulator	* Bacillus cereus ATCC 14579 Site: position = -181 score = 4.86103 sequence = GTATAATGATTATAG Gene: BC1188: Transcriptional regulator	Bacillus halodurans C-125 Gene: BH2861: Transcriptional regulator	Bacillus clausii KSM-K16 Gene: ABC2528: Transcriptional regulator	* Oceanobacillus iheyensis HTE831 Site: position = -72 score = 4.79659 sequence = TTAGACTAATTTTAA Gene: OB1213: Transcriptional regulator	Paenibacillus sp. JDR-2	Transcriptional regulator

CRON 9.
ypzK	Bacillus subtilis subsp. subtilis str. 168 Gene: BSU23240: GCN5-related N-acetyltransferase (GNAT) domain protein	Bacillus amyloliquefaciens FZB42 Gene: RBAM_021380: GCN5-related N-acetyltransferase (GNAT) domain protein	* Bacillus pumilus SAFR-032 Site: position = -85 score = 4.82363 sequence = TAAAAATGTTTATAA Gene: BPUM_2058: GCN5-related N-acetyltransferase (GNAT) domain protein	* Bacillus licheniformis DSM 13 Site: position = -74 score = 4.82363 sequence = TAAAAATGTTTATAA Gene: BLi02471: GCN5-related N-acetyltransferase (GNAT) domain protein	* Anoxybacillus flavithermus WK1 Site: position = -86 score = 4.05694 sequence = TTAAAAAATGTTTAA Gene: Aflv_1019: GCN5-related N-acetyltransferase (GNAT) domain protein	* Geobacillus kaustophilus HTA426 Site: position = -83 score = 4.55509 sequence = TGAGAATGTTTATAA Gene: GK2293: GCN5-related N-acetyltransferase (GNAT) domain protein	* Bacillus cereus ATCC 14579 Site: position = -30 score = 4.01219 sequence = TTGTAACTTTTGTAA Site: position = -87 score = 4.29028 sequence = TTGAAAATATTGTAA Gene: BC4060: GCN5-related N-acetyltransferase (GNAT) domain protein	Bacillus halodurans C-125 Gene: BH1558: GCN5-related N-acetyltransferase (GNAT) domain protein	Bacillus clausii KSM-K16	* Oceanobacillus iheyensis HTE831 Site: position = -136 score = 5.01153 sequence = TTATACTAATTCTAA Gene: OB1830: GCN5-related N-acetyltransferase (GNAT) domain protein	Paenibacillus sp. JDR-2	GCN5-related N-acetyltransferase (GNAT) domain protein

CRON 10.
yeiH	Bacillus subtilis subsp. subtilis str. 168	Bacillus amyloliquefaciens FZB42 Gene: RBAM_034840: Putative membrane protein YeiH	Bacillus pumilus SAFR-032	Bacillus licheniformis DSM 13	Anoxybacillus flavithermus WK1	* Geobacillus kaustophilus HTA426 Site: position = -88 score = 4.89544 sequence = TTATAAAAATAATAA Gene: GK0890: Putative membrane protein YeiH	* Bacillus cereus ATCC 14579 Site: position = -81 score = 4.73993 sequence = TTAAACTTATTATAG Gene: BC5174: Putative membrane protein YeiH	Bacillus halodurans C-125	Bacillus clausii KSM-K16	* Oceanobacillus iheyensis HTE831 Site: position = -37 score = 4.58854 sequence = CTATACTAATTATAG Site: position = -85 score = 4.58551 sequence = TAATAAGTATTATTA Gene: OB3406: Putative membrane protein YeiH	* Paenibacillus sp. JDR-2 Site: position = -91 score = 5.96386 sequence = TTATAATTATTATAA Gene: Pjdr2_5937: Putative membrane protein YeiH	Putative membrane protein YeiH

CRON 11.
perR	* Bacillus subtilis subsp. subtilis str. 168 Site: position = -34 score = 4.2153 sequence = TAAGAATTTTTTTTA Site: position = -51 score = 4.99017 sequence = TTATAAACATTACAA Gene: BSU08730: Transcriptional regulator of peroxide stress response, Fur family	* Bacillus amyloliquefaciens FZB42 Site: position = -34 score = 4.42025 sequence = TAATAATCTTTTTTA Site: position = -51 score = 5.44195 sequence = TTATAAACATTATAA Gene: RBAM_008820: Transcriptional regulator of peroxide stress response, Fur family	* Bacillus pumilus SAFR-032 Site: position = -50 score = 5.44195 sequence = TTATAAAGATTATAA Gene: BPUM_0827: Transcriptional regulator of peroxide stress response, Fur family	* Bacillus licheniformis DSM 13 Site: position = -33 score = 4.2153 sequence = TAAGAATTTTTTTTA Site: position = -50 score = 4.94891 sequence = TTATAAACGTTATAA Gene: BLi00900: Transcriptional regulator of peroxide stress response, Fur family	* Anoxybacillus flavithermus WK1 Site: position = -15 score = 5.54667 sequence = TTATAATTTTTATAA Site: position = -38 score = 5.54667 sequence = TTATAAAAATTATAA Gene: Aflv_0369: Transcriptional regulator of peroxide stress response, Fur family	* Geobacillus kaustophilus HTA426 Site: position = -44 score = 4.17736 sequence = TGATAATTTTTTTCA Site: position = -61 score = 5.54667 sequence = TTATAAATATTATAA Gene: GK0478: Transcriptional regulator of peroxide stress response, Fur family	* Bacillus cereus ATCC 14579 Site: position = -43 score = 5.39226 sequence = TTATAAGAATTATAA Gene: BC0518: Transcriptional regulator of peroxide stress response, Fur family	* Bacillus halodurans C-125 Site: position = -54 score = 5.44195 sequence = TTATAAAGATTATAA Gene: BH0951: Transcriptional regulator of peroxide stress response, Fur family	* Bacillus clausii KSM-K16 Site: position = -50 score = 5.23318 sequence = TTATAATTAATATAA Gene: ABC1322: Transcriptional regulator of peroxide stress response, Fur family	* Oceanobacillus iheyensis HTE831 Site: position = -49 score = 4.27712 sequence = TAATAATTTTATTAA Site: position = -66 score = 5.28754 sequence = TTATAAGGATTATAA Gene: OB0905: Transcriptional regulator of peroxide stress response, Fur family	* Paenibacillus sp. JDR-2 Site: position = -209 score = 4.07431 sequence = TTGGAAGCATTACAA Gene: Pjdr2_1094: Transcriptional regulator of peroxide stress response, Fur family	Transcriptional regulator of peroxide stress response, Fur family

CRON 12.
OB0178	Bacillus subtilis subsp. subtilis str. 168	Bacillus amyloliquefaciens FZB42	Bacillus pumilus SAFR-032	Bacillus licheniformis DSM 13	Anoxybacillus flavithermus WK1	Geobacillus kaustophilus HTA426	Bacillus cereus ATCC 14579	Bacillus halodurans C-125	Bacillus clausii KSM-K16	* Oceanobacillus iheyensis HTE831 Site: position = -57 score = 5.48715 sequence = TTATAATAACTATAA Gene: OB0178: hypothetical protein	Paenibacillus sp. JDR-2	Hypothetical protein
OB0179	Bacillus subtilis subsp. subtilis str. 168	Bacillus amyloliquefaciens FZB42	Bacillus pumilus SAFR-032	Bacillus licheniformis DSM 13	Anoxybacillus flavithermus WK1	Geobacillus kaustophilus HTA426	Bacillus cereus ATCC 14579	Bacillus halodurans C-125	Bacillus clausii KSM-K16	Oceanobacillus iheyensis HTE831 Gene: OB0179: Hypothetical protein	Paenibacillus sp. JDR-2	Hypothetical protein

CRON 13.
katA	* Bacillus subtilis subsp. subtilis str. 168 Site: position = -78 score = 5.96386 sequence = TTATAATAATTATAA Gene: BSU08820: Catalase (EC 1.11.1.6)	* Bacillus amyloliquefaciens FZB42 Site: position = -78 score = 5.85914 sequence = TTATAATCATTATAA Gene: RBAM_009090: Catalase (EC 1.11.1.6)	Bacillus pumilus SAFR-032	* Bacillus licheniformis DSM 13 Site: position = -87 score = 5.96386 sequence = TTATAATAATTATAA Gene: BLi04113: Catalase (EC 1.11.1.6)	Anoxybacillus flavithermus WK1	Geobacillus kaustophilus HTA426	Bacillus cereus ATCC 14579	Bacillus halodurans C-125	Bacillus clausii KSM-K16	* Oceanobacillus iheyensis HTE831 Site: position = -98 score = 5.15925 sequence = TTAAAATAATTGTAA Gene: OB0633: Catalase (EC 1.11.1.6)	Paenibacillus sp. JDR-2 Gene: Pjdr2_5427: Catalase (EC 1.11.1.6)	Catalase (EC 1.11.1.6)

CRON 14.
hemA	* Bacillus subtilis subsp. subtilis str. 168 Site: position = -49 score = 5.54946 sequence = TTAGAATGATTATAA Site: position = -79 score = 5.96386 sequence = TTATAATTATTATAA Gene: BSU28170: Glutamyl-tRNA reductase (EC 1.2.1.70)	* Bacillus amyloliquefaciens FZB42 Site: position = -39 score = 5.54946 sequence = TTAGAATGATTATAA Site: position = -69 score = 5.85914 sequence = TTATAATCATTATAA Gene: RBAM_025230: Glutamyl-tRNA reductase (EC 1.2.1.70)	* Bacillus pumilus SAFR-032 Site: position = -49 score = 5.51209 sequence = TTGTAATTATTATAA Site: position = -79 score = 5.85914 sequence = TTATAATCATTATAA Gene: BPUM_2458: Glutamyl-tRNA reductase (EC 1.2.1.70)	* Bacillus licheniformis DSM 13 Site: position = -48 score = 5.54946 sequence = TTATAATCATTCTAA Site: position = -78 score = 4.42765 sequence = TTATAATCGTTTTGA Gene: BLi02947: Glutamyl-tRNA reductase (EC 1.2.1.70)	Anoxybacillus flavithermus WK1 Gene: Aflv_0605: Glutamyl-tRNA reductase (EC 1.2.1.70)	Geobacillus kaustophilus HTA426 Gene: GK2647: Glutamyl-tRNA reductase (EC 1.2.1.70)	* Bacillus cereus ATCC 14579 Site: position = -175 score = 5.85914 sequence = TTATAATCATTATAA Gene: BC4473: Glutamyl-tRNA reductase (EC 1.2.1.70)	* Bacillus halodurans C-125 Site: position = -83 score = 4.1013 sequence = TTAGACATGTTATAA Site: position = -249 score = 5.25081 sequence = TAATAATAATTCTAA Gene: BH3048: Glutamyl-tRNA reductase (EC 1.2.1.70)	* Bacillus clausii KSM-K16 Site: position = -93 score = 4.1013 sequence = TTAGACATGTTATAA Gene: ABC2632: Glutamyl-tRNA reductase (EC 1.2.1.70)	* Oceanobacillus iheyensis HTE831 Site: position = -49 score = 5.09769 sequence = TTATAATAATATTAA Site: position = -66 score = 4.8298 sequence = TTATAATAAATATTA Gene: OB2070: Glutamyl-tRNA reductase (EC 1.2.1.70)	* Paenibacillus sp. JDR-2 Site: position = -47 score = 5.54946 sequence = TTATAATCATTCTAA Gene: Pjdr2_4440: Glutamyl-tRNA reductase (EC 1.2.1.70)	Glutamyl-tRNA reductase (EC 1.2.1.70)
hemX	Bacillus subtilis subsp. subtilis str. 168 Gene: BSU28160: HemX protein, negative effector of steady-state concentration of glutamyl-tRNA reductase	Bacillus amyloliquefaciens FZB42 Gene: RBAM_025220: HemX protein, negative effector of steady-state concentration of glutamyl-tRNA reductase	Bacillus pumilus SAFR-032 Gene: BPUM_2457: HemX protein, negative effector of steady-state concentration of glutamyl-tRNA reductase	Bacillus licheniformis DSM 13 Gene: BLi02946: HemX protein, negative effector of steady-state concentration of glutamyl-tRNA reductase	Anoxybacillus flavithermus WK1 Gene: Aflv_0606: HemX protein, negative effector of steady-state concentration of glutamyl-tRNA reductase	Geobacillus kaustophilus HTA426 Gene: GK2646: HemX protein, negative effector of steady-state concentration of glutamyl-tRNA reductase	Bacillus cereus ATCC 14579 Gene: BC4472: HemX protein, negative effector of steady-state concentration of glutamyl-tRNA reductase	Bacillus halodurans C-125 Gene: BH3047: HemX protein, negative effector of steady-state concentration of glutamyl-tRNA reductase	Bacillus clausii KSM-K16 Gene: ABC2631: HemX protein, negative effector of steady-state concentration of glutamyl-tRNA reductase	* Oceanobacillus iheyensis HTE831 Site: position = -43 score = 4.42818 sequence = TTGAAAAAATTACAA Site: position = -250 score = 4.00424 sequence = CAAAAAGTATTATTA Gene: OB2069: HemX protein, negative effector of steady-state concentration of glutamyl-tRNA reductase	Paenibacillus sp. JDR-2 Gene: Pjdr2_4439: HemX protein, negative effector of steady-state concentration of glutamyl-tRNA reductase	HemX protein, negative effector of steady-state concentration of glutamyl-tRNA reductase
Pjdr2_4438	Bacillus subtilis subsp. subtilis str. 168	Bacillus amyloliquefaciens FZB42	Bacillus pumilus SAFR-032	Bacillus licheniformis DSM 13	Anoxybacillus flavithermus WK1	Geobacillus kaustophilus HTA426	Bacillus cereus ATCC 14579	Bacillus halodurans C-125	Bacillus clausii KSM-K16	Oceanobacillus iheyensis HTE831	Paenibacillus sp. JDR-2 Gene: Pjdr2_4438: Siroheme synthase	Siroheme synthase
hemC	Bacillus subtilis subsp. subtilis str. 168 Gene: BSU28150: Porphobilinogen deaminase (EC 2.5.1.61)	Bacillus amyloliquefaciens FZB42 Gene: RBAM_025210: Porphobilinogen deaminase (EC 2.5.1.61)	Bacillus pumilus SAFR-032 Gene: BPUM_2456: Porphobilinogen deaminase (EC 2.5.1.61)	Bacillus licheniformis DSM 13 Gene: BLi02945: Porphobilinogen deaminase (EC 2.5.1.61)	Anoxybacillus flavithermus WK1 Gene: Aflv_0607: Porphobilinogen deaminase (EC 2.5.1.61)	Geobacillus kaustophilus HTA426 Gene: GK2645: Porphobilinogen deaminase (EC 2.5.1.61)	Bacillus cereus ATCC 14579 Gene: BC4471: Porphobilinogen deaminase (EC 2.5.1.61)	Bacillus halodurans C-125 Gene: BH3046: Porphobilinogen deaminase (EC 2.5.1.61)	Bacillus clausii KSM-K16 Gene: ABC2630: Porphobilinogen deaminase (EC 2.5.1.61)	Oceanobacillus iheyensis HTE831 Gene: OB2068: Porphobilinogen deaminase (EC 2.5.1.61)	Paenibacillus sp. JDR-2 Gene: Pjdr2_4437: Porphobilinogen deaminase (EC 2.5.1.61)	Porphobilinogen deaminase (EC 2.5.1.61)
hemD	Bacillus subtilis subsp. subtilis str. 168 Gene: BSU28140: Uroporphyrinogen-III synthase (EC 4.2.1.75)	Bacillus amyloliquefaciens FZB42 Gene: RBAM_025200: Uroporphyrinogen-III synthase (EC 4.2.1.75)	Bacillus pumilus SAFR-032 Gene: BPUM_2455: Uroporphyrinogen-III synthase (EC 4.2.1.75)	Bacillus licheniformis DSM 13 Gene: BLi02944: Uroporphyrinogen-III synthase (EC 4.2.1.75)	Anoxybacillus flavithermus WK1 Gene: Aflv_0608: Uroporphyrinogen-III synthase (EC 4.2.1.75)	Geobacillus kaustophilus HTA426 Gene: GK2644: Uroporphyrinogen-III synthase (EC 4.2.1.75)	Bacillus cereus ATCC 14579 Gene: BC4470: Uroporphyrinogen-III synthase (EC 4.2.1.75)	Bacillus halodurans C-125 Gene: BH3045: Uroporphyrinogen-III synthase (EC 4.2.1.75)	Bacillus clausii KSM-K16 Gene: ABC2629: Uroporphyrinogen-III synthase (EC 4.2.1.75)	Oceanobacillus iheyensis HTE831 Gene: OB2067: Uroporphyrinogen-III synthase (EC 4.2.1.75)	Paenibacillus sp. JDR-2 Gene: Pjdr2_4436: Uroporphyrinogen-III synthase (EC 4.2.1.75)	Uroporphyrinogen-III synthase (EC 4.2.1.75)
hemB	Bacillus subtilis subsp. subtilis str. 168 Gene: BSU28130: Delta-aminolevulinic acid dehydratase (EC 4.2.1.24)	Bacillus amyloliquefaciens FZB42 Gene: RBAM_025190: Delta-aminolevulinic acid dehydratase (EC 4.2.1.24)	Bacillus pumilus SAFR-032 Gene: BPUM_2454: Delta-aminolevulinic acid dehydratase (EC 4.2.1.24)	Bacillus licheniformis DSM 13 Gene: BLi02943: Delta-aminolevulinic acid dehydratase (EC 4.2.1.24)	Anoxybacillus flavithermus WK1 Gene: Aflv_0609: Delta-aminolevulinic acid dehydratase (EC 4.2.1.24)	Geobacillus kaustophilus HTA426 Gene: GK2643: Delta-aminolevulinic acid dehydratase (EC 4.2.1.24)	Bacillus cereus ATCC 14579 Gene: BC4469: Delta-aminolevulinic acid dehydratase (EC 4.2.1.24)	Bacillus halodurans C-125 Gene: BH3044: Delta-aminolevulinic acid dehydratase (EC 4.2.1.24)	Bacillus clausii KSM-K16 Gene: ABC2628: Delta-aminolevulinic acid dehydratase (EC 4.2.1.24)	Oceanobacillus iheyensis HTE831 Gene: OB2066: Delta-aminolevulinic acid dehydratase (EC 4.2.1.24)	Paenibacillus sp. JDR-2 Gene: Pjdr2_4435: Delta-aminolevulinic acid dehydratase (EC 4.2.1.24)	Delta-aminolevulinic acid dehydratase (EC 4.2.1.24)
hemL	Bacillus subtilis subsp. subtilis str. 168 Gene: BSU28120: Glutamate-1-semialdehyde aminotransferase (EC 5.4.3.8)	Bacillus amyloliquefaciens FZB42 Gene: RBAM_025180: Glutamate-1-semialdehyde aminotransferase (EC 5.4.3.8)	Bacillus pumilus SAFR-032 Gene: BPUM_2453: Glutamate-1-semialdehyde aminotransferase (EC 5.4.3.8)	Bacillus licheniformis DSM 13 Gene: BLi02942: Glutamate-1-semialdehyde aminotransferase (EC 5.4.3.8)	Anoxybacillus flavithermus WK1 Gene: Aflv_0610: Glutamate-1-semialdehyde aminotransferase (EC 5.4.3.8)	Geobacillus kaustophilus HTA426 Gene: GK2642: Glutamate-1-semialdehyde aminotransferase (EC 5.4.3.8)	Bacillus cereus ATCC 14579 Gene: BC4468: Glutamate-1-semialdehyde aminotransferase (EC 5.4.3.8)	Bacillus halodurans C-125 Gene: BH3043: Glutamate-1-semialdehyde aminotransferase (EC 5.4.3.8)	Bacillus clausii KSM-K16 Gene: ABC2627: Glutamate-1-semialdehyde aminotransferase (EC 5.4.3.8)	Oceanobacillus iheyensis HTE831 Gene: OB2065: Glutamate-1-semialdehyde aminotransferase (EC 5.4.3.8)	Paenibacillus sp. JDR-2 Gene: Pjdr2_4434: Glutamate-1-semialdehyde aminotransferase (EC 5.4.3.8)	Glutamate-1-semialdehyde aminotransferase (EC 5.4.3.8)
yhcT	Bacillus subtilis subsp. subtilis str. 168 Gene: BSU09210: Putative RNA pseudouridine synthase	Bacillus amyloliquefaciens FZB42	Bacillus pumilus SAFR-032	Bacillus licheniformis DSM 13 Gene: BLi00984: Putative RNA pseudouridine synthase	Anoxybacillus flavithermus WK1	Geobacillus kaustophilus HTA426	Bacillus cereus ATCC 14579	Bacillus halodurans C-125	Bacillus clausii KSM-K16	Oceanobacillus iheyensis HTE831	Paenibacillus sp. JDR-2 Gene: Pjdr2_4433: Putative RNA pseudouridine synthase	Putative RNA pseudouridine synthase

CRON 15.
Aflv_0994	Bacillus subtilis subsp. subtilis str. 168	Bacillus amyloliquefaciens FZB42	Bacillus pumilus SAFR-032	Bacillus licheniformis DSM 13	2 Anoxybacillus flavithermus WK1* Gene: Aflv_0994: Transposase Site: position = -196 score = 5.01242 sequence = TTATAATCATTTTAT Site: position = -219 score = 4.60905 sequence = TAATAATCATTTTAT Site: position = -236 score = 4.3104 sequence = GAAAAATAATTATTA Gene: Aflv_0993: Transposase	Geobacillus kaustophilus HTA426	Bacillus cereus ATCC 14579	Bacillus halodurans C-125	Bacillus clausii KSM-K16	Oceanobacillus iheyensis HTE831	Paenibacillus sp. JDR-2	Transposase
fur	* Bacillus subtilis subsp. subtilis str. 168 Site: position = -76 score = 5.59753 sequence = TTATAATAATTATAG Site: position = -116 score = 5.24082 sequence = TTAAAATCATTATTA Gene: BSU23520: Transcriptional regulator for iron transport and metabolism	* Bacillus amyloliquefaciens FZB42 Site: position = -76 score = 5.59753 sequence = TTATAATAATTATAG Site: position = -116 score = 4.97228 sequence = TTAGAATGATTATCA Gene: RBAM_021640: Transcriptional regulator for iron transport and metabolism	* Bacillus pumilus SAFR-032 Site: position = -76 score = 5.27786 sequence = TTAAAATGATTATAG Site: position = -116 score = 4.96272 sequence = TTATAATCGTTATTA Gene: BPUM_2084: Transcriptional regulator for iron transport and metabolism	* Bacillus licheniformis DSM 13 Site: position = -77 score = 5.4928 sequence = TTATAATGATTATAG Site: position = -117 score = 5.45576 sequence = TTATAATGATTATTA Gene: BLi02503: Transcriptional regulator for iron transport and metabolism	Anoxybacillus flavithermus WK1 Gene: Aflv_0995: Transcriptional regulator for iron transport and metabolism	* Geobacillus kaustophilus HTA426 Site: position = -77 score = 4.13234 sequence = TAATAGTGATTTTAC Site: position = -100 score = 4.38554 sequence = TAATAACCATTATCA Gene: GK2317: Transcriptional regulator for iron transport and metabolism	* Bacillus cereus ATCC 14579 Site: position = -99 score = 4.49982 sequence = TGAGAATAATTATCA Gene: BC4091: Transcriptional regulator for iron transport and metabolism	* Bacillus halodurans C-125 Site: position = -77 score = 5.05239 sequence = TAATAATCATTATTA Site: position = -101 score = 4.35153 sequence = TAATAATAATTATCT Site: position = -118 score = 4.33676 sequence = TTATAACAAATATTA Gene: BH1527: Transcriptional regulator for iron transport and metabolism	* Bacillus clausii KSM-K16 Site: position = -83 score = 4.69431 sequence = TTGGAATCATTATTA Site: position = -124 score = 4.89274 sequence = TTAGAATAATTCCAA Gene: ABC1780: Transcriptional regulator for iron transport and metabolism	* Oceanobacillus iheyensis HTE831 Site: position = -94 score = 5.96386 sequence = TTATAATTATTATAA Gene: OB1849: Transcriptional regulator for iron transport and metabolism	* Paenibacillus sp. JDR-2 Site: position = -75 score = 5.54946 sequence = TTATAATCATTCTAA Site: position = -91 score = 5.65419 sequence = TTATAATTATTCTAA Site: position = -117 score = 4.14105 sequence = GTGTAATAATGATAA Gene: Pjdr2_1270: Transcriptional regulator for iron transport and metabolism	Transcriptional regulator for iron transport and metabolism

CRON 16.
czcD	Bacillus subtilis subsp. subtilis str. 168	Bacillus amyloliquefaciens FZB42	Bacillus pumilus SAFR-032	Bacillus licheniformis DSM 13	* Anoxybacillus flavithermus WK1 Site: position = -57 score = 5.08378 sequence = TTATAGTAATTATTA Gene: Aflv_0372: Co/Zn/Cd efflux system component	* Geobacillus kaustophilus HTA426 Site: position = -31 score = 5.38668 sequence = TGATAATTATTATAA Gene: GK2881: Co/Zn/Cd efflux system component	Bacillus cereus ATCC 14579	Bacillus halodurans C-125	Bacillus clausii KSM-K16	Oceanobacillus iheyensis HTE831	* Paenibacillus sp. JDR-2 Site: position = -37 score = 5.54946 sequence = TTATAATCATTCTAA Gene: Pjdr2_4210: Co/Zn/Cd efflux system component	Co/Zn/Cd efflux system component

CRON 17.
yxbB	Bacillus subtilis subsp. subtilis str. 168 Gene: BSU39890: SAM-dependent methyltransferase (EC 2.1.1.-)	Bacillus amyloliquefaciens FZB42	Bacillus pumilus SAFR-032	Bacillus licheniformis DSM 13	Anoxybacillus flavithermus WK1	Geobacillus kaustophilus HTA426	Bacillus cereus ATCC 14579	* Bacillus halodurans C-125 Site: position = -55 score = 5.54946 sequence = TTAGAATCATTATAA Gene: BH1951: SAM-dependent methyltransferase (EC 2.1.1.-)	Bacillus clausii KSM-K16	Oceanobacillus iheyensis HTE831	Paenibacillus sp. JDR-2	SAM-dependent methyltransferase (EC 2.1.1.-)

CRON 18.
ahpC	* Bacillus subtilis subsp. subtilis str. 168 Site: position = -60 score = 4.88448 sequence = TTAGAATTATTATTG Gene: BSU40090: Alkyl hydroperoxide reductase protein C (EC 1.6.4.-)	* Bacillus amyloliquefaciens FZB42 Site: position = -79 score = 4.88448 sequence = TTAGAATTATTATTG Gene: RBAM_036960: Alkyl hydroperoxide reductase protein C (EC 1.6.4.-)	Bacillus pumilus SAFR-032	* Bacillus licheniformis DSM 13 Site: position = -70 score = 5.59753 sequence = TTATAATAATTATAG Gene: BLi04291: Alkyl hydroperoxide reductase protein C (EC 1.6.4.-)	* Anoxybacillus flavithermus WK1 Site: position = -100 score = 5.47082 sequence = TTATAATTGTTATAA Gene: Aflv_2773: Alkyl hydroperoxide reductase protein C (EC 1.6.4.-)	* Geobacillus kaustophilus HTA426 Site: position = -44 score = 5.74892 sequence = TTAAAATTATTATAA Gene: GK2575: Alkyl hydroperoxide reductase protein C (EC 1.6.4.-)	* Bacillus cereus ATCC 14579 Site: position = -88 score = 5.28785 sequence = TTAGAATTATTATAG Gene: BC0377: Alkyl hydroperoxide reductase protein C (EC 1.6.4.-)	Bacillus halodurans C-125	Bacillus clausii KSM-K16	Oceanobacillus iheyensis HTE831	Paenibacillus sp. JDR-2	Alkyl hydroperoxide reductase protein C (EC 1.6.4.-)
ahpF	Bacillus subtilis subsp. subtilis str. 168 Gene: BSU40100: Alkyl hydroperoxide reductase protein F (EC 1.6.4.-)	Bacillus amyloliquefaciens FZB42 Gene: RBAM_036970: Alkyl hydroperoxide reductase protein F (EC 1.6.4.-)	Bacillus pumilus SAFR-032	Bacillus licheniformis DSM 13 Gene: BLi04292: Alkyl hydroperoxide reductase protein F (EC 1.6.4.-)	Anoxybacillus flavithermus WK1 Gene: Aflv_2772: Alkyl hydroperoxide reductase protein F (EC 1.6.4.-)	Geobacillus kaustophilus HTA426 Gene: GK2574: Alkyl hydroperoxide reductase protein F (EC 1.6.4.-)	Bacillus cereus ATCC 14579 Gene: BC0376: Alkyl hydroperoxide reductase protein F (EC 1.6.4.-)	Bacillus halodurans C-125	Bacillus clausii KSM-K16	Oceanobacillus iheyensis HTE831	Paenibacillus sp. JDR-2	Alkyl hydroperoxide reductase protein F (EC 1.6.4.-)

CRON 19.
Aflv_2437	Bacillus subtilis subsp. subtilis str. 168	Bacillus amyloliquefaciens FZB42	Bacillus pumilus SAFR-032	Bacillus licheniformis DSM 13	* Anoxybacillus flavithermus WK1 Site: position = -50 score = 4.88031 sequence = ATGTAATAATTATAA Gene: Aflv_2437: Hypothetical protein	* Geobacillus kaustophilus HTA426 Site: position = -50 score = 4.88031 sequence = ATGTAATAATTATAA Gene: GKP11: Hypothetical protein	Bacillus cereus ATCC 14579	Bacillus halodurans C-125	Bacillus clausii KSM-K16	Oceanobacillus iheyensis HTE831	Paenibacillus sp. JDR-2	Hypothetical protein
Aflv_2436	Bacillus subtilis subsp. subtilis str. 168	Bacillus amyloliquefaciens FZB42	Bacillus pumilus SAFR-032	Bacillus licheniformis DSM 13	Anoxybacillus flavithermus WK1 Gene: Aflv_2436: Predicted Zn peptidase	Geobacillus kaustophilus HTA426 Gene: GKP10: Predicted Zn peptidase	Bacillus cereus ATCC 14579	Bacillus halodurans C-125	Bacillus clausii KSM-K16	Oceanobacillus iheyensis HTE831	Paenibacillus sp. JDR-2	Predicted Zn peptidase

Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.

Red color - the gene is in non-regulated operon.

Gray color - the orthologous gene is absent.

The star symbol - the TFBS is located in upstream region of this gene.

The number - the numeber of homologs (shown only if it is greater than one).

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Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --

Regulog PerR - Bacillales

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --