Regulon of PerR in Bacillus clausii KSM-K16
| Regulator type: | Transcription factor |
| TF locus tag: | ABC1322 |
| Regulator family: | FUR |
| Regulation mode: | repressor |
| Biological process: | Oxidative stress response; Peroxide stress response |
| Effector: | Hydrogen peroxide; Manganese ion, (Mn2+); Iron ion, (Fe2+) |
| Regulog: | PerR - Bacillales |
| Statistics of regulated genes: | |
| - Genes | 9 |
| - Operons | 4 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Bacillales
- By TF family - FUR
- By effector - Hydrogen peroxide
- By effector - Manganese ion, (Mn2+)
- By effector - Iron ion, (Fe2+)
- By pathway - Oxidative stress response
- By pathway - Peroxide stress response
| Locus Tag | Name | Function | |
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Position: -150
Score: 4.8 Sequence: TGATAATTATTATCA
Position: -30
Score: 4.4 Sequence: TTAAAATAATTGAAA
Locus tag: ABC3349
Name: zosA Funciton: Zn(2+)-translocating P-type ATPase |
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zosA
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Zn(2+)-translocating P-type ATPase
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Position: -50
Score: 5.2 Sequence: TTATAATTAATATAA
Locus tag: ABC1322
Name: perR Funciton: Transcriptional regulator of peroxide stress response, Fur family |
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perR
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Transcriptional regulator of peroxide stress response, Fur family
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Position: -93
Score: 4.1 Sequence: TTAGACATGTTATAA
Locus tag: ABC2632
Name: hemA Funciton: Glutamyl-tRNA reductase (EC 1.2.1.70)
Locus tag: ABC2631
Name: hemX Funciton: HemX protein, negative effector of steady-state concentration of glutamyl-tRNA reductase
Locus tag: ABC2630
Name: hemC Funciton: Porphobilinogen deaminase (EC 2.5.1.61)
Locus tag: ABC2629
Name: hemD Funciton: Uroporphyrinogen-III synthase (EC 4.2.1.75)
Locus tag: ABC2628
Name: hemB Funciton: Delta-aminolevulinic acid dehydratase (EC 4.2.1.24)
Locus tag: ABC2627
Name: hemL Funciton: Glutamate-1-semialdehyde aminotransferase (EC 5.4.3.8) |
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hemA
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Glutamyl-tRNA reductase (EC 1.2.1.70)
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hemX
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HemX protein, negative effector of steady-state concentration of glutamyl-tRNA reductase
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hemC
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Porphobilinogen deaminase (EC 2.5.1.61)
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hemD
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Uroporphyrinogen-III synthase (EC 4.2.1.75)
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hemB
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Delta-aminolevulinic acid dehydratase (EC 4.2.1.24)
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hemL
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Glutamate-1-semialdehyde aminotransferase (EC 5.4.3.8)
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Position: -124
Score: 4.9 Sequence: TTAGAATAATTCCAA
Position: -83
Score: 4.7 Sequence: TTGGAATCATTATTA
Locus tag: ABC1780
Name: fur Funciton: Transcriptional regulator for iron transport and metabolism |
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fur
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Transcriptional regulator for iron transport and metabolism
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |