Regulon of PerR in Paenibacillus sp. JDR-2

Properties
Regulator type:	Transcription factor
TF locus tag:	Pjdr2_1094
Regulator family:	FUR
Regulation mode:	repressor
Biological process:	Oxidative stress response; Peroxide stress response
Effector:	Hydrogen peroxide; Manganese ion, (Mn2+); Iron ion, (Fe2+)
Regulog:	PerR - Bacillales
Statistics of regulated genes:
- Genes	13
- Operons	6
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 129 sites [see more]

Member of regulog collections

By taxonomy - Bacillales
By TF family - FUR
By effector - Hydrogen peroxide
By effector - Manganese ion, (Mn2+)
By effector - Iron ion, (Fe2+)
By pathway - Oxidative stress response
By pathway - Peroxide stress response

Regulated operons
	Locus Tag	Name	Function
Position: -69 Score: 5.3 Sequence: TTGTAATAATTTTAA Locus tag: Pjdr2_0784 Name: trxB Funciton: Thioredoxin reductase
	Pjdr2_0784	trxB	Thioredoxin reductase
Position: -91 Score: 6 Sequence: TTATAATTATTATAA Locus tag: Pjdr2_5937 Name: yeiH Funciton: Putative membrane protein YeiH
	Pjdr2_5937	yeiH	Putative membrane protein YeiH
Position: -209 Score: 4.1 Sequence: TTGGAAGCATTACAA Locus tag: Pjdr2_1094 Name: perR Funciton: Transcriptional regulator of peroxide stress response, Fur family
	Pjdr2_1094	perR	Transcriptional regulator of peroxide stress response, Fur family
Position: -47 Score: 5.5 Sequence: TTATAATCATTCTAA Locus tag: Pjdr2_4440 Name: hemA Funciton: Glutamyl-tRNA reductase (EC 1.2.1.70) Locus tag: Pjdr2_4439 Name: hemX Funciton: HemX protein, negative effector of steady-state concentration of glutamyl-tRNA reductase Locus tag: Pjdr2_4438 Name: null Funciton: Siroheme synthase Locus tag: Pjdr2_4437 Name: hemC Funciton: Porphobilinogen deaminase (EC 2.5.1.61) Locus tag: Pjdr2_4436 Name: hemD Funciton: Uroporphyrinogen-III synthase (EC 4.2.1.75) Locus tag: Pjdr2_4435 Name: hemB Funciton: Delta-aminolevulinic acid dehydratase (EC 4.2.1.24) Locus tag: Pjdr2_4434 Name: hemL Funciton: Glutamate-1-semialdehyde aminotransferase (EC 5.4.3.8) Locus tag: Pjdr2_4433 Name: yhcT Funciton: Putative RNA pseudouridine synthase
	Pjdr2_4440	hemA	Glutamyl-tRNA reductase (EC 1.2.1.70)
	Pjdr2_4439	hemX	HemX protein, negative effector of steady-state concentration of glutamyl-tRNA reductase
	Pjdr2_4438		Siroheme synthase
	Pjdr2_4437	hemC	Porphobilinogen deaminase (EC 2.5.1.61)
	Pjdr2_4436	hemD	Uroporphyrinogen-III synthase (EC 4.2.1.75)
	Pjdr2_4435	hemB	Delta-aminolevulinic acid dehydratase (EC 4.2.1.24)
	Pjdr2_4434	hemL	Glutamate-1-semialdehyde aminotransferase (EC 5.4.3.8)
	Pjdr2_4433	yhcT	Putative RNA pseudouridine synthase
Position: -117 Score: 4.1 Sequence: GTGTAATAATGATAA Position: -91 Score: 5.7 Sequence: TTATAATTATTCTAA Position: -75 Score: 5.5 Sequence: TTATAATCATTCTAA Locus tag: Pjdr2_1270 Name: fur Funciton: Transcriptional regulator for iron transport and metabolism
	Pjdr2_1270	fur	Transcriptional regulator for iron transport and metabolism
Position: -37 Score: 5.5 Sequence: TTATAATCATTCTAA Locus tag: Pjdr2_4210 Name: czcD Funciton: Co/Zn/Cd efflux system component
	Pjdr2_4210	czcD	Co/Zn/Cd efflux system component

Export
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