Regulon of PerR in Bacillus amyloliquefaciens FZB42

Properties
Regulator type:	Transcription factor
TF locus tag:	RBAM_008820
Regulator family:	FUR
Regulation mode:	repressor
Biological process:	Oxidative stress response; Peroxide stress response
Effector:	Hydrogen peroxide; Manganese ion, (Mn2+); Iron ion, (Fe2+)
Regulog:	PerR - Bacillales
Statistics of regulated genes:
- Genes	18
- Operons	10
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 129 sites [see more]

Member of regulog collections

By taxonomy - Bacillales
By TF family - FUR
By effector - Hydrogen peroxide
By effector - Manganese ion, (Mn2+)
By effector - Iron ion, (Fe2+)
By pathway - Oxidative stress response
By pathway - Peroxide stress response

Regulated operons
	Locus Tag	Name	Function
Position: -57 Score: 5.1 Sequence: TTATAATAACTATAG Locus tag: RBAM_024240 Name: yybE Funciton: Transcriptional regulator, LysR family Locus tag: RBAM_024230 Name: yjdI Funciton: Hypothetical protein Locus tag: RBAM_024220 Name: null Funciton: Metal-dependent hydrolase
	RBAM_024240	yybE	Transcriptional regulator, LysR family
	RBAM_024230	yjdI	Hypothetical protein
	RBAM_024220		Metal-dependent hydrolase
Position: -177 Score: 4.8 Sequence: TGATAATTATTATCA Position: -154 Score: 5.3 Sequence: TTAAAACAATTATAA Locus tag: RBAM_013620 Name: zosA Funciton: Zn(2+)-translocating P-type ATPase
	RBAM_013620	zosA	Zn(2+)-translocating P-type ATPase
Position: -171 Score: 4.1 Sequence: TTAAATTCATTTTCA Position: -87 Score: 4.2 Sequence: ATATAATTATTAGTA Locus tag: RBAM_009770 Name: plsC Funciton: 1-acyl-sn-glycerol-3-phosphate acyltransferase (EC 2.3.1.51)
	RBAM_009770	plsC	1-acyl-sn-glycerol-3-phosphate acyltransferase (EC 2.3.1.51)
Position: -90 Score: 4.3 Sequence: GTATAATACCTATAA Position: -64 Score: 4.5 Sequence: TTAAAGTCATTTCAA Locus tag: RBAM_011500 Name: spxA Funciton: Transcriptional regulator
	RBAM_011500	spxA	Transcriptional regulator
Position: -51 Score: 5.4 Sequence: TTATAAACATTATAA Position: -34 Score: 4.4 Sequence: TAATAATCTTTTTTA Locus tag: RBAM_008820 Name: perR Funciton: Transcriptional regulator of peroxide stress response, Fur family
	RBAM_008820	perR	Transcriptional regulator of peroxide stress response, Fur family
Position: -76 Score: 6 Sequence: TTATAATTATTATAA Locus tag: RBAM_030100 Name: mrgA Funciton: Metalloregulation DNA-binding stress protein
	RBAM_030100	mrgA	Metalloregulation DNA-binding stress protein
Position: -78 Score: 5.9 Sequence: TTATAATCATTATAA Locus tag: RBAM_009090 Name: katA Funciton: Catalase (EC 1.11.1.6)
	RBAM_009090	katA	Catalase (EC 1.11.1.6)
Position: -69 Score: 5.9 Sequence: TTATAATCATTATAA Position: -39 Score: 5.5 Sequence: TTAGAATGATTATAA Locus tag: RBAM_025230 Name: hemA Funciton: Glutamyl-tRNA reductase (EC 1.2.1.70) Locus tag: RBAM_025220 Name: hemX Funciton: HemX protein, negative effector of steady-state concentration of glutamyl-tRNA reductase Locus tag: RBAM_025210 Name: hemC Funciton: Porphobilinogen deaminase (EC 2.5.1.61) Locus tag: RBAM_025200 Name: hemD Funciton: Uroporphyrinogen-III synthase (EC 4.2.1.75) Locus tag: RBAM_025190 Name: hemB Funciton: Delta-aminolevulinic acid dehydratase (EC 4.2.1.24) Locus tag: RBAM_025180 Name: hemL Funciton: Glutamate-1-semialdehyde aminotransferase (EC 5.4.3.8)
	RBAM_025230	hemA	Glutamyl-tRNA reductase (EC 1.2.1.70)
	RBAM_025220	hemX	HemX protein, negative effector of steady-state concentration of glutamyl-tRNA reductase
	RBAM_025210	hemC	Porphobilinogen deaminase (EC 2.5.1.61)
	RBAM_025200	hemD	Uroporphyrinogen-III synthase (EC 4.2.1.75)
	RBAM_025190	hemB	Delta-aminolevulinic acid dehydratase (EC 4.2.1.24)
	RBAM_025180	hemL	Glutamate-1-semialdehyde aminotransferase (EC 5.4.3.8)
Position: -116 Score: 5 Sequence: TTAGAATGATTATCA Position: -76 Score: 5.6 Sequence: TTATAATAATTATAG Locus tag: RBAM_021640 Name: fur Funciton: Transcriptional regulator for iron transport and metabolism
	RBAM_021640	fur	Transcriptional regulator for iron transport and metabolism
Position: -79 Score: 4.9 Sequence: TTAGAATTATTATTG Locus tag: RBAM_036960 Name: ahpC Funciton: Alkyl hydroperoxide reductase protein C (EC 1.6.4.-) Locus tag: RBAM_036970 Name: ahpF Funciton: Alkyl hydroperoxide reductase protein F (EC 1.6.4.-)
	RBAM_036960	ahpC	Alkyl hydroperoxide reductase protein C (EC 1.6.4.-)
	RBAM_036970	ahpF	Alkyl hydroperoxide reductase protein F (EC 1.6.4.-)

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --

Regulon of PerR in Bacillus amyloliquefaciens FZB42

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --