Regulon of PerR in Bacillus licheniformis DSM 13
| Regulator type: | Transcription factor |
| TF locus tag: | BLi00900 |
| Regulator family: | FUR |
| Regulation mode: | repressor |
| Biological process: | Oxidative stress response; Peroxide stress response |
| Effector: | Hydrogen peroxide; Manganese ion, (Mn2+); Iron ion, (Fe2+) |
| Regulog: | PerR - Bacillales |
| Statistics of regulated genes: | |
| - Genes | 17 |
| - Operons | 11 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Bacillales
- By TF family - FUR
- By effector - Hydrogen peroxide
- By effector - Manganese ion, (Mn2+)
- By effector - Iron ion, (Fe2+)
- By pathway - Oxidative stress response
- By pathway - Peroxide stress response
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -52
Score: 4.9 Sequence: TTATAATAACTATCA
Locus tag: BLi02845
Name: yybE Funciton: Transcriptional regulator, LysR family |
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yybE
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Transcriptional regulator, LysR family
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Position: -200
Score: 5.6 Sequence: TTATAATAATTATTA
Locus tag: BLi01593
Name: zosA Funciton: Zn(2+)-translocating P-type ATPase |
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zosA
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Zn(2+)-translocating P-type ATPase
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Position: -62
Score: 4.2 Sequence: AAAAAATTGTTATAA
Locus tag: BLi01022
Name: plsC Funciton: 1-acyl-sn-glycerol-3-phosphate acyltransferase (EC 2.3.1.51) |
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plsC
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1-acyl-sn-glycerol-3-phosphate acyltransferase (EC 2.3.1.51)
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Position: -62
Score: 4.5 Sequence: TTAGAGTTATTTCAA
Locus tag: BLi01238
Name: spxA Funciton: Transcriptional regulator |
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spxA
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Transcriptional regulator
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Position: -74
Score: 4.8 Sequence: TAAAAATGTTTATAA
Locus tag: BLi02471
Name: ypzK Funciton: GCN5-related N-acetyltransferase (GNAT) domain protein |
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ypzK
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GCN5-related N-acetyltransferase (GNAT) domain protein
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Position: -50
Score: 4.9 Sequence: TTATAAACGTTATAA
Position: -33
Score: 4.2 Sequence: TAAGAATTTTTTTTA
Locus tag: BLi00900
Name: perR Funciton: Transcriptional regulator of peroxide stress response, Fur family |
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perR
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Transcriptional regulator of peroxide stress response, Fur family
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Position: -88
Score: 5.7 Sequence: TTAAAATAATTATAA
Position: -54
Score: 4.3 Sequence: TTGTATTTGTTATAA
Locus tag: BLi03480
Name: mrgA Funciton: Metalloregulation DNA-binding stress protein |
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mrgA
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Metalloregulation DNA-binding stress protein
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Position: -87
Score: 6 Sequence: TTATAATAATTATAA
Locus tag: BLi04113
Name: katA Funciton: Catalase (EC 1.11.1.6) |
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katA
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Catalase (EC 1.11.1.6)
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Position: -78
Score: 4.4 Sequence: TTATAATCGTTTTGA
Position: -48
Score: 5.5 Sequence: TTATAATCATTCTAA
Locus tag: BLi02947
Name: hemA Funciton: Glutamyl-tRNA reductase (EC 1.2.1.70)
Locus tag: BLi02946
Name: hemX Funciton: HemX protein, negative effector of steady-state concentration of glutamyl-tRNA reductase
Locus tag: BLi02945
Name: hemC Funciton: Porphobilinogen deaminase (EC 2.5.1.61)
Locus tag: BLi02944
Name: hemD Funciton: Uroporphyrinogen-III synthase (EC 4.2.1.75)
Locus tag: BLi02943
Name: hemB Funciton: Delta-aminolevulinic acid dehydratase (EC 4.2.1.24)
Locus tag: BLi02942
Name: hemL Funciton: Glutamate-1-semialdehyde aminotransferase (EC 5.4.3.8) |
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hemA
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Glutamyl-tRNA reductase (EC 1.2.1.70)
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hemX
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HemX protein, negative effector of steady-state concentration of glutamyl-tRNA reductase
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hemC
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Porphobilinogen deaminase (EC 2.5.1.61)
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hemD
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Uroporphyrinogen-III synthase (EC 4.2.1.75)
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hemB
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Delta-aminolevulinic acid dehydratase (EC 4.2.1.24)
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hemL
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Glutamate-1-semialdehyde aminotransferase (EC 5.4.3.8)
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Position: -117
Score: 5.5 Sequence: TTATAATGATTATTA
Position: -77
Score: 5.5 Sequence: TTATAATGATTATAG
Locus tag: BLi02503
Name: fur Funciton: Transcriptional regulator for iron transport and metabolism |
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fur
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Transcriptional regulator for iron transport and metabolism
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Position: -70
Score: 5.6 Sequence: TTATAATAATTATAG
Locus tag: BLi04291
Name: ahpC Funciton: Alkyl hydroperoxide reductase protein C (EC 1.6.4.-)
Locus tag: BLi04292
Name: ahpF Funciton: Alkyl hydroperoxide reductase protein F (EC 1.6.4.-) |
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ahpC
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Alkyl hydroperoxide reductase protein C (EC 1.6.4.-)
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ahpF
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Alkyl hydroperoxide reductase protein F (EC 1.6.4.-)
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |