Regulog EutR - Rhodobacterales
| Regulator type: | Transcription factor |
| Regulator family: | RpiR |
| Regulation mode: | |
| Biological process: | Ethanolamine utilization |
| Effector: | Ethanolamine |
| Phylum: | Proteobacteria/Alpha |
| Visualization: | |
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Allows to visualize regulog content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Rhodobacterales
- By TF family - RpiR
- By effector - Ethanolamine
- By pathway - Ethanolamine utilization
| Genome | Genes | Operons |
|---|---|---|
| Hyphomonas neptunium ATCC 15444 | ||
| Jannaschia sp. CCS1 | ||
| Loktanella vestfoldensis SKA53 | 8 | 2 |
| Oceanicaulis alexandrii HTCC2633 | ||
| Oceanicola batsensis HTCC2597 | 9 | 2 |
| Oceanicola granulosus HTCC2516 | ||
| Paracoccus denitrificans PD1222 | 8 | 2 |
| Rhodobacter sphaeroides 2.4.1 | 8 | 2 |
| Rhodobacterales bacterium HTCC2654 | ||
| Roseobacter sp. MED193 | 8 | 2 |
| Roseovarius nubinhibens ISM | 8 | 2 |
| Roseovarius sp. 217 | 8 | 2 |
| Silicibacter TM1040 | 8 | 2 |
| Silicibacter pomeroyi DSS-3 | 8 | 2 |
| Sulfitobacter sp. EE-36 | 8 | 2 |
| Genes | Function | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| CRON 1. | ||||||||||||||||
| eutA |
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Loktanella vestfoldensis SKA53 Site: position = -101 score = 4.96778 sequence = GTTGAAACGTTTGTTTCAAA Gene: SKA53_10329: COG3931: Predicted N-formylglutamate amidohydrolase |
|
*
Oceanicola batsensis HTCC2597 Site: position = -53 score = 5.26582 sequence = TTTGTAGAAATTGTTACAGG Gene: OB2597_09009: COG3931: Predicted N-formylglutamate amidohydrolase |
|
*
Paracoccus denitrificans PD1222 Site: position = -93 score = 4.08191 sequence = TTCGTAACATTCTTAACAGG Site: position = -63 score = 5.0671 sequence = TCTGAAAAATAATTGACAGA Gene: Pden_4543: COG3931: Predicted N-formylglutamate amidohydrolase |
*
Rhodobacter sphaeroides 2.4.1 Site: position = -87 score = 4.32351 sequence = GAAGAAAAATTCTTGACAGA Site: position = -116 score = 4.62553 sequence = GCAGTAAACATCTTAACAGC Gene: RSP_2323: COG3931: Predicted N-formylglutamate amidohydrolase |
|
*
Roseobacter sp. MED193 Site: position = -64 score = 5.06191 sequence = TCTGAAATTATATTGACAGA Site: position = -34 score = 5.11337 sequence = CGTGAAAAGATTTTTCCAAA Gene: MED193_10026: COG3931: Predicted N-formylglutamate amidohydrolase |
*
Roseovarius nubinhibens ISM Site: position = -62 score = 5.75781 sequence = TGTGAAAACATTTTTTCAAA Gene: ISM_11445: COG3931: Predicted N-formylglutamate amidohydrolase |
*
Roseovarius sp. 217 Site: position = -36 score = 5.6105 sequence = TGTGGAAACATTTTTACAAA Site: position = -66 score = 4.82484 sequence = GCTGGAAATATATTGACACA Gene: ROS217_08284: COG3931: Predicted N-formylglutamate amidohydrolase |
*
Silicibacter TM1040 Site: position = -54 score = 5.19503 sequence = GATGAAAGAATTTTTACAGA Gene: TM1040_2787: COG3931: Predicted N-formylglutamate amidohydrolase |
*
Silicibacter pomeroyi DSS-3 Site: position = -10 score = 5.1223 sequence = GTTGTAACCAATGTTACACA Site: position = -54 score = 5.33844 sequence = TCTGTAATCATGTCTACAGA Gene: SPO2603: COG3931: Predicted N-formylglutamate amidohydrolase |
*
Sulfitobacter sp. EE-36 Site: position = -83 score = 4.7874 sequence = TGTGAAGCAAAGATTACAGA Gene: EE36_04403: COG3931: Predicted N-formylglutamate amidohydrolase |
COG3931: Predicted N-formylglutamate amidohydrolase |
| eutQ |
|
|
Gene: SKA53_10324: TRAP-type ethanolamine transport system, small permease component |
|
Gene: OB2597_09004: TRAP-type ethanolamine transport system, small permease component |
|
Gene: Pden_4544: TRAP-type ethanolamine transport system, small permease component |
Gene: RSP_2322: TRAP-type ethanolamine transport system, small permease component |
|
Gene: MED193_10031: TRAP-type ethanolamine transport system, small permease component |
Gene: ISM_11440: TRAP-type ethanolamine transport system, small permease component |
Gene: ROS217_08289: TRAP-type ethanolamine transport system, small permease component |
Gene: TM1040_2786: TRAP-type ethanolamine transport system, small permease component |
Gene: SPO2604: TRAP-type ethanolamine transport system, small permease component |
Gene: EE36_04398: TRAP-type ethanolamine transport system, small permease component |
TRAP-type ethanolamine transport system, small permease component |
| eutM |
|
|
Gene: SKA53_10319: TRAP-type ethanolamine transport system, large permease component |
|
Gene: OB2597_08999: TRAP-type ethanolamine transport system, large permease component |
|
Gene: Pden_4545: TRAP-type ethanolamine transport system, large permease component |
Gene: RSP_2321: TRAP-type ethanolamine transport system, large permease component |
|
Gene: MED193_10036: TRAP-type ethanolamine transport system, large permease component |
Gene: ISM_11435: TRAP-type ethanolamine transport system, large permease component |
Gene: ROS217_08294: TRAP-type ethanolamine transport system, large permease component |
Gene: TM1040_2785: TRAP-type ethanolamine transport system, large permease component |
Gene: SPO2605: TRAP-type ethanolamine transport system, large permease component |
Gene: EE36_04393: TRAP-type ethanolamine transport system, large permease component |
TRAP-type ethanolamine transport system, large permease component |
| eutP |
|
|
Gene: SKA53_10314: TRAP-type ethanolamine transport system, periplasmic component |
|
Gene: OB2597_08994: TRAP-type ethanolamine transport system, periplasmic component |
|
Gene: Pden_4546: TRAP-type ethanolamine transport system, periplasmic component |
Gene: RSP_2320: TRAP-type ethanolamine transport system, periplasmic component |
|
Gene: MED193_10041: TRAP-type ethanolamine transport system, periplasmic component |
Gene: ISM_11430: TRAP-type ethanolamine transport system, periplasmic component |
Gene: ROS217_08299: TRAP-type ethanolamine transport system, periplasmic component |
Gene: TM1040_2784: TRAP-type ethanolamine transport system, periplasmic component |
Gene: SPO2606: TRAP-type ethanolamine transport system, periplasmic component |
Gene: EE36_04388: TRAP-type ethanolamine transport system, periplasmic component |
TRAP-type ethanolamine transport system, periplasmic component |
| eutB |
|
|
Gene: SKA53_10309: glutamine synthetase family protein |
|
Gene: OB2597_08989: glutamine synthetase family protein |
|
Gene: Pden_4547: glutamine synthetase family protein |
Gene: RSP_2319: glutamine synthetase family protein |
|
Gene: MED193_10046: glutamine synthetase family protein |
Gene: ISM_11425: glutamine synthetase family protein |
Gene: ROS217_08304: glutamine synthetase family protein |
Gene: TM1040_2783: glutamine synthetase family protein |
Gene: SPO2607: glutamine synthetase family protein |
Gene: EE36_04383: glutamine synthetase family protein |
glutamine synthetase family protein |
| OB2597_08984 |
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Gene: OB2597_08984: BIPHENYL-2,3-DIOL 1,2-DIOXYGENASE III (EC 1.13.11.39) |
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BIPHENYL-2,3-DIOL 1,2-DIOXYGENASE III (EC 1.13.11.39) |
| eutX |
|
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Gene: SKA53_10304: Aldehyde dehydrogenase (EC 1.2.1.3) |
|
Gene: OB2597_08979: Aldehyde dehydrogenase (EC 1.2.1.3) |
|
Gene: Pden_4548: Aldehyde dehydrogenase (EC 1.2.1.3) |
Gene: RSP_2318: Aldehyde dehydrogenase (EC 1.2.1.3) |
|
Gene: MED193_10051: Aldehyde dehydrogenase (EC 1.2.1.3) |
Gene: ISM_11420: Aldehyde dehydrogenase (EC 1.2.1.3) |
Gene: ROS217_08309: Aldehyde dehydrogenase (EC 1.2.1.3) |
Gene: TM1040_2782: Aldehyde dehydrogenase (EC 1.2.1.3) |
Gene: SPO2608: Aldehyde dehydrogenase (EC 1.2.1.3) |
Gene: EE36_04378: Aldehyde dehydrogenase (EC 1.2.1.3) |
Aldehyde dehydrogenase (EC 1.2.1.3) |
| eutY |
|
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Gene: SKA53_10299: Alcohol dehydrogenase (EC 1.1.1.1) |
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Gene: OB2597_08974: Alcohol dehydrogenase (EC 1.1.1.1) |
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Gene: Pden_4549: Alcohol dehydrogenase (EC 1.1.1.1) |
Gene: RSP_2317: Alcohol dehydrogenase (EC 1.1.1.1) |
|
Gene: MED193_10056: Alcohol dehydrogenase (EC 1.1.1.1) |
Gene: ISM_11415: Alcohol dehydrogenase (EC 1.1.1.1) |
Gene: ROS217_08314: Alcohol dehydrogenase (EC 1.1.1.1) |
Gene: TM1040_2781: Alcohol dehydrogenase (EC 1.1.1.1) |
Gene: SPO2609: Alcohol dehydrogenase (EC 1.1.1.1) |
Gene: EE36_04373: Alcohol dehydrogenase (EC 1.1.1.1) |
Alcohol dehydrogenase (EC 1.1.1.1) |
| CRON 2. | ||||||||||||||||
| eutR |
|
|
*
Loktanella vestfoldensis SKA53 Site: position = -46 score = 4.96778 sequence = TTTGAAACAAACGTTTCAAC Gene: SKA53_10334: Transcriptional regulator of ethanolamine utilization, RpiR family |
|
*
Oceanicola batsensis HTCC2597 Site: position = -53 score = 5.26582 sequence = CCTGTAACAATTTCTACAAA Gene: OB2597_09014: Transcriptional regulator of ethanolamine utilization, RpiR family |
|
*
Paracoccus denitrificans PD1222 Site: position = -48 score = 4.08191 sequence = CCTGTTAAGAATGTTACGAA Site: position = -78 score = 5.0671 sequence = TCTGTCAATTATTTTTCAGA Gene: Pden_4542: Transcriptional regulator of ethanolamine utilization, RpiR family |
*
Rhodobacter sphaeroides 2.4.1 Site: position = -107 score = 4.32351 sequence = TCTGTCAAGAATTTTTCTTC Site: position = -78 score = 4.62553 sequence = GCTGTTAAGATGTTTACTGC Gene: RSP_2324: Transcriptional regulator of ethanolamine utilization, RpiR family |
|
*
Roseobacter sp. MED193 Site: position = -143 score = 5.11337 sequence = TTTGGAAAAATCTTTTCACG Site: position = -113 score = 5.06191 sequence = TCTGTCAATATAATTTCAGA Gene: MED193_10021: Transcriptional regulator of ethanolamine utilization, RpiR family |
*
Roseovarius nubinhibens ISM Site: position = -109 score = 5.75781 sequence = TTTGAAAAAATGTTTTCACA Gene: ISM_11450: Transcriptional regulator of ethanolamine utilization, RpiR family |
*
Roseovarius sp. 217 Site: position = 11 score = 4.82484 sequence = TGTGTCAATATATTTCCAGC Site: position = -19 score = 5.6105 sequence = TTTGTAAAAATGTTTCCACA Gene: ROS217_08279: Transcriptional regulator of ethanolamine utilization, RpiR family |
*
Silicibacter TM1040 Site: position = -70 score = 5.19503 sequence = TCTGTAAAAATTCTTTCATC Gene: TM1040_2788: Transcriptional regulator of ethanolamine utilization, RpiR family |
*
Silicibacter pomeroyi DSS-3 Site: position = -105 score = 5.1223 sequence = TGTGTAACATTGGTTACAAC Site: position = -61 score = 5.33844 sequence = TCTGTAGACATGATTACAGA Gene: SPO2602: Transcriptional regulator of ethanolamine utilization, RpiR family |
*
Sulfitobacter sp. EE-36 Site: position = -51 score = 4.7874 sequence = TCTGTAATCTTTGCTTCACA Gene: EE36_04408: Transcriptional regulator of ethanolamine utilization, RpiR family |
Transcriptional regulator of ethanolamine utilization, RpiR family |
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |