Regulog Rex - Frankineae/Propionibacterineae/Pseudonocardiaceae
| Regulator type: | Transcription factor |
| Regulator family: | Rex |
| Regulation mode: | repressor |
| Biological process: | Energy metabolism |
| Effector: | NADH |
| Phylum: | Actinobacteria |
| Visualization: | |
|
Allows to visualize regulog content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Frankineae/Propionibacterineae/Pseudonocardiaceae
- By trascription factor - Rex
- By TF family - Rex
- By effector - NADH
- By pathway - Energy metabolism
| Genome | Genes | Operons |
|---|---|---|
| Saccharopolyspora erythraea NRRL 2338 | 21 | 3 |
| Saccharomonospora viridis DSM 43017 | 20 | 3 |
| Propionibacterium acnes KPA171202 | ||
| Nocardioides sp. JS614 | 21 | 3 |
| Nakamurella multipartita DSM 44233 | 19 | 3 |
| Frankia sp. EAN1pec | 21 | 2 |
| Frankia sp. CcI3 | 21 | 2 |
| Actinosynnema mirum DSM 43827 | 21 | 4 |
| Acidothermus cellulolyticus 11B | 22 | 3 |
| Genes | Function | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| CRON 1. | ||||||||||
| COG0644 |
*
Saccharopolyspora erythraea NRRL 2338 Site: position = -68 score = 5.66 sequence = TAGTGAACTCGTTCACAA Gene: SACE_6903: Putative NAD-dependent reductase, COG0644 |
|
Gene: PPA1938: Putative NAD-dependent reductase, COG0644 |
|
*
Nakamurella multipartita DSM 44233 Site: position = -96 score = 5.99542 sequence = TCGTGAACGAATTCACAA Gene: Namu_0973: Putative NAD-dependent reductase, COG0644 |
*
Frankia sp. EAN1pec Site: position = -85 score = 5.48087 sequence = TCGTGAAGAATTTCACGA Gene: Franean1_6095: Putative NAD-dependent reductase, COG0644 |
*
Frankia sp. CcI3 Site: position = -92 score = 5.48087 sequence = TCGTGAAGAATTTCACGA Gene: Francci3_0537: Putative NAD-dependent reductase, COG0644 |
*
Actinosynnema mirum DSM 43827 Site: position = -27 score = 5.67581 sequence = TTGTGAACAAGTGCACAA Gene: Amir_6683: Putative NAD-dependent reductase, COG0644 |
*
Acidothermus cellulolyticus 11B Site: position = -61 score = 5.60727 sequence = TCGTGAAGAATTTCACAA Gene: Acel_0266: Putative NAD-dependent reductase, COG0644 |
Putative NAD-dependent reductase, COG0644 |
| nuoA |
Gene: SACE_6902: NADH ubiquinone oxidoreductase chain A (EC 1.6.5.3) |
*
Saccharomonospora viridis DSM 43017 Site: position = -195 score = 5.70802 sequence = TTGTGAAGGTATTCACAT Site: position = -226 score = 6.00948 sequence = TTGTGAATGGCTTCACAA Gene: Svir_03160: NADH ubiquinone oxidoreductase chain A (EC 1.6.5.3) |
Gene: PPA1936: NADH ubiquinone oxidoreductase chain A (EC 1.6.5.3) |
*
Nocardioides sp. JS614 Site: position = -87 score = 5.55245 sequence = TCGTGATTGTGTTCACAA Gene: Noca_0520: NADH ubiquinone oxidoreductase chain A (EC 1.6.5.3) |
Gene: Namu_0974: NADH ubiquinone oxidoreductase chain A (EC 1.6.5.3) |
Gene: Franean1_6094: NADH ubiquinone oxidoreductase chain A (EC 1.6.5.3) |
Gene: Francci3_0538: NADH ubiquinone oxidoreductase chain A (EC 1.6.5.3) |
*
Actinosynnema mirum DSM 43827 Site: position = -135 score = 6.08345 sequence = TTGTGAAGGCTTTCACAA Site: position = -167 score = 5.37792 sequence = ATGTGAATCACTTCACAA Gene: Amir_6682: NADH ubiquinone oxidoreductase chain A (EC 1.6.5.3) |
Gene: Acel_0267: NADH ubiquinone oxidoreductase chain A (EC 1.6.5.3) |
NADH ubiquinone oxidoreductase chain A (EC 1.6.5.3) |
| nuoB |
Gene: SACE_6901: NADH-ubiquinone oxidoreductase chain B (EC 1.6.5.3) |
Gene: Svir_03170: NADH-ubiquinone oxidoreductase chain B (EC 1.6.5.3) |
Gene: PPA1935: NADH-ubiquinone oxidoreductase chain B (EC 1.6.5.3) |
Gene: Noca_0521: NADH-ubiquinone oxidoreductase chain B (EC 1.6.5.3) |
Gene: Namu_0975: NADH-ubiquinone oxidoreductase chain B (EC 1.6.5.3) |
Gene: Franean1_6093: NADH-ubiquinone oxidoreductase chain B (EC 1.6.5.3) |
Gene: Francci3_0539: NADH-ubiquinone oxidoreductase chain B (EC 1.6.5.3) |
Gene: Amir_6681: NADH-ubiquinone oxidoreductase chain B (EC 1.6.5.3) |
Gene: Acel_0268: NADH-ubiquinone oxidoreductase chain B (EC 1.6.5.3) |
NADH-ubiquinone oxidoreductase chain B (EC 1.6.5.3) |
| nuoC |
Gene: SACE_6900: NADH-ubiquinone oxidoreductase chain C (EC 1.6.5.3) |
Gene: Svir_03180: NADH-ubiquinone oxidoreductase chain C (EC 1.6.5.3) |
Gene: PPA1934: NADH-ubiquinone oxidoreductase chain C (EC 1.6.5.3) |
Gene: Noca_0522: NADH-ubiquinone oxidoreductase chain C (EC 1.6.5.3) |
Gene: Namu_0976: NADH-ubiquinone oxidoreductase chain C (EC 1.6.5.3) |
Gene: Franean1_6092: NADH-ubiquinone oxidoreductase chain C (EC 1.6.5.3) |
Gene: Francci3_0540: NADH-ubiquinone oxidoreductase chain C (EC 1.6.5.3) |
Gene: Amir_6680: NADH-ubiquinone oxidoreductase chain C (EC 1.6.5.3) |
Gene: Acel_0269: NADH-ubiquinone oxidoreductase chain C (EC 1.6.5.3) |
NADH-ubiquinone oxidoreductase chain C (EC 1.6.5.3) |
| nuoD |
Gene: SACE_6899: NADH-ubiquinone oxidoreductase chain D (EC 1.6.5.3) |
Gene: Svir_03190: NADH-ubiquinone oxidoreductase chain D (EC 1.6.5.3) |
Gene: PPA1933: NADH-ubiquinone oxidoreductase chain D (EC 1.6.5.3) |
Gene: Noca_0523: NADH-ubiquinone oxidoreductase chain D (EC 1.6.5.3) |
Gene: Namu_0977: NADH-ubiquinone oxidoreductase chain D (EC 1.6.5.3) |
Gene: Franean1_6091: NADH-ubiquinone oxidoreductase chain D (EC 1.6.5.3) |
Gene: Francci3_0541: NADH-ubiquinone oxidoreductase chain D (EC 1.6.5.3) |
Gene: Amir_6679: NADH-ubiquinone oxidoreductase chain D (EC 1.6.5.3) |
Gene: Acel_0270: NADH-ubiquinone oxidoreductase chain D (EC 1.6.5.3) |
NADH-ubiquinone oxidoreductase chain D (EC 1.6.5.3) |
| nuoE |
Gene: SACE_6898: NADH-ubiquinone oxidoreductase chain E (EC 1.6.5.3) |
Gene: Svir_03200: NADH-ubiquinone oxidoreductase chain E (EC 1.6.5.3) |
Gene: PPA1932: NADH-ubiquinone oxidoreductase chain E (EC 1.6.5.3) |
Gene: Noca_0524: NADH-ubiquinone oxidoreductase chain E (EC 1.6.5.3) |
Gene: Namu_0978: NADH-ubiquinone oxidoreductase chain E (EC 1.6.5.3) |
Gene: Franean1_6090: NADH-ubiquinone oxidoreductase chain E (EC 1.6.5.3) |
Gene: Francci3_0542: NADH-ubiquinone oxidoreductase chain E (EC 1.6.5.3) |
Gene: Amir_6678: NADH-ubiquinone oxidoreductase chain E (EC 1.6.5.3) |
Gene: Acel_0271: NADH-ubiquinone oxidoreductase chain E (EC 1.6.5.3) |
NADH-ubiquinone oxidoreductase chain E (EC 1.6.5.3) |
| nuoF |
Gene: SACE_6897: NADH-ubiquinone oxidoreductase chain F (EC 1.6.5.3) |
Gene: Svir_03210: NADH-ubiquinone oxidoreductase chain F (EC 1.6.5.3) |
Gene: PPA1931: NADH-ubiquinone oxidoreductase chain F (EC 1.6.5.3) |
Gene: Noca_0525: NADH-ubiquinone oxidoreductase chain F (EC 1.6.5.3) |
Gene: Namu_0979: NADH-ubiquinone oxidoreductase chain F (EC 1.6.5.3) |
Gene: Franean1_6089: NADH-ubiquinone oxidoreductase chain F (EC 1.6.5.3) |
Gene: Francci3_0543: NADH-ubiquinone oxidoreductase chain F (EC 1.6.5.3) |
Gene: Amir_6677: NADH-ubiquinone oxidoreductase chain F (EC 1.6.5.3) |
Gene: Acel_0272: NADH-ubiquinone oxidoreductase chain F (EC 1.6.5.3) |
NADH-ubiquinone oxidoreductase chain F (EC 1.6.5.3) |
| nuoG |
Gene: SACE_6896: NADH-ubiquinone oxidoreductase chain G (EC 1.6.5.3) |
Gene: Svir_03220: NADH-ubiquinone oxidoreductase chain G (EC 1.6.5.3) |
Gene: PPA1930: NADH-ubiquinone oxidoreductase chain G (EC 1.6.5.3) |
Gene: Noca_0526: NADH-ubiquinone oxidoreductase chain G (EC 1.6.5.3) |
Gene: Namu_0980: NADH-ubiquinone oxidoreductase chain G (EC 1.6.5.3) |
Gene: Franean1_6088: NADH-ubiquinone oxidoreductase chain G (EC 1.6.5.3) |
Gene: Francci3_0544: NADH-ubiquinone oxidoreductase chain G (EC 1.6.5.3) |
Gene: Amir_6676: NADH-ubiquinone oxidoreductase chain G (EC 1.6.5.3) |
Gene: Acel_0273: NADH-ubiquinone oxidoreductase chain G (EC 1.6.5.3) |
NADH-ubiquinone oxidoreductase chain G (EC 1.6.5.3) |
| nuoH |
Gene: SACE_6895: NADH-ubiquinone oxidoreductase chain H (EC 1.6.5.3) |
Gene: Svir_03230: NADH-ubiquinone oxidoreductase chain H (EC 1.6.5.3) |
Gene: PPA1929: NADH-ubiquinone oxidoreductase chain H (EC 1.6.5.3) |
Gene: Noca_0527: NADH-ubiquinone oxidoreductase chain H (EC 1.6.5.3) |
Gene: Namu_0981: NADH-ubiquinone oxidoreductase chain H (EC 1.6.5.3) |
Gene: Franean1_6087: NADH-ubiquinone oxidoreductase chain H (EC 1.6.5.3) |
Gene: Francci3_0545: NADH-ubiquinone oxidoreductase chain H (EC 1.6.5.3) |
Gene: Amir_6675: NADH-ubiquinone oxidoreductase chain H (EC 1.6.5.3) |
Gene: Acel_0274: NADH-ubiquinone oxidoreductase chain H (EC 1.6.5.3) |
NADH-ubiquinone oxidoreductase chain H (EC 1.6.5.3) |
| nuoI |
Gene: SACE_6894: NADH-ubiquinone oxidoreductase chain I (EC 1.6.5.3) |
Gene: Svir_03240: NADH-ubiquinone oxidoreductase chain I (EC 1.6.5.3) |
Gene: PPA1928: NADH-ubiquinone oxidoreductase chain I (EC 1.6.5.3) |
Gene: Noca_0528: NADH-ubiquinone oxidoreductase chain I (EC 1.6.5.3) |
Gene: Namu_0982: NADH-ubiquinone oxidoreductase chain I (EC 1.6.5.3) |
Gene: Franean1_6086: NADH-ubiquinone oxidoreductase chain I (EC 1.6.5.3) |
Gene: Francci3_0546: NADH-ubiquinone oxidoreductase chain I (EC 1.6.5.3) |
Gene: Amir_6674: NADH-ubiquinone oxidoreductase chain I (EC 1.6.5.3) |
Gene: Acel_0275: NADH-ubiquinone oxidoreductase chain I (EC 1.6.5.3) |
NADH-ubiquinone oxidoreductase chain I (EC 1.6.5.3) |
| nuoJ |
Gene: SACE_6893: NADH-ubiquinone oxidoreductase chain J (EC 1.6.5.3) |
Gene: Svir_03250: NADH-ubiquinone oxidoreductase chain J (EC 1.6.5.3) |
Gene: PPA1926: NADH-ubiquinone oxidoreductase chain J (EC 1.6.5.3) |
Gene: Noca_0529: NADH-ubiquinone oxidoreductase chain J (EC 1.6.5.3) |
Gene: Namu_0983: NADH-ubiquinone oxidoreductase chain J (EC 1.6.5.3) |
Gene: Franean1_6085: NADH-ubiquinone oxidoreductase chain J (EC 1.6.5.3) |
Gene: Francci3_0547: NADH-ubiquinone oxidoreductase chain J (EC 1.6.5.3) |
Gene: Amir_6673: NADH-ubiquinone oxidoreductase chain J (EC 1.6.5.3) |
Gene: Acel_0276: NADH-ubiquinone oxidoreductase chain J (EC 1.6.5.3) |
NADH-ubiquinone oxidoreductase chain J (EC 1.6.5.3) |
| nuoK |
Gene: SACE_6892: NADH-ubiquinone oxidoreductase chain K (EC 1.6.5.3) |
Gene: Svir_03260: NADH-ubiquinone oxidoreductase chain K (EC 1.6.5.3) |
Gene: PPA1925: NADH-ubiquinone oxidoreductase chain K (EC 1.6.5.3) |
Gene: Noca_0530: NADH-ubiquinone oxidoreductase chain K (EC 1.6.5.3) |
Gene: Namu_0984: NADH-ubiquinone oxidoreductase chain K (EC 1.6.5.3) |
Gene: Franean1_6084: NADH-ubiquinone oxidoreductase chain K (EC 1.6.5.3) |
Gene: Francci3_0548: NADH-ubiquinone oxidoreductase chain K (EC 1.6.5.3) |
Gene: Amir_6672: NADH-ubiquinone oxidoreductase chain K (EC 1.6.5.3) |
Gene: Acel_0277: NADH-ubiquinone oxidoreductase chain K (EC 1.6.5.3) |
NADH-ubiquinone oxidoreductase chain K (EC 1.6.5.3) |
| nuoL |
Gene: SACE_6891: NADH-ubiquinone oxidoreductase chain L (EC 1.6.5.3) |
Gene: Svir_03270: NADH-ubiquinone oxidoreductase chain L (EC 1.6.5.3) |
Gene: PPA1924: NADH-ubiquinone oxidoreductase chain L (EC 1.6.5.3) |
Gene: Noca_0531: NADH-ubiquinone oxidoreductase chain L (EC 1.6.5.3) |
Gene: Namu_0985: NADH-ubiquinone oxidoreductase chain L (EC 1.6.5.3) |
Gene: Franean1_6083: NADH-ubiquinone oxidoreductase chain L (EC 1.6.5.3) |
Gene: Francci3_0549: NADH-ubiquinone oxidoreductase chain L (EC 1.6.5.3) |
Gene: Amir_6671: NADH-ubiquinone oxidoreductase chain L (EC 1.6.5.3) |
Gene: Acel_0278: NADH-ubiquinone oxidoreductase chain L (EC 1.6.5.3) |
NADH-ubiquinone oxidoreductase chain L (EC 1.6.5.3) |
| nuoM |
Gene: SACE_6890: NADH-ubiquinone oxidoreductase chain M (EC 1.6.5.3) |
Gene: Svir_03280: NADH-ubiquinone oxidoreductase chain M (EC 1.6.5.3) |
Gene: PPA1923: NADH-ubiquinone oxidoreductase chain M (EC 1.6.5.3) |
Gene: Noca_0532: NADH-ubiquinone oxidoreductase chain M (EC 1.6.5.3) |
Gene: Namu_0986: NADH-ubiquinone oxidoreductase chain M (EC 1.6.5.3) |
Gene: Franean1_6082: NADH-ubiquinone oxidoreductase chain M (EC 1.6.5.3) |
Gene: Francci3_0550: NADH-ubiquinone oxidoreductase chain M (EC 1.6.5.3) |
Gene: Amir_6670: NADH-ubiquinone oxidoreductase chain M (EC 1.6.5.3) |
Gene: Acel_0279: NADH-ubiquinone oxidoreductase chain M (EC 1.6.5.3) |
NADH-ubiquinone oxidoreductase chain M (EC 1.6.5.3) |
| nuoN |
Gene: SACE_6889: NADH-ubiquinone oxidoreductase chain N (EC 1.6.5.3) |
Gene: Svir_03290: NADH-ubiquinone oxidoreductase chain N (EC 1.6.5.3) |
Gene: PPA1922: NADH-ubiquinone oxidoreductase chain N (EC 1.6.5.3) |
Gene: Noca_0533: NADH-ubiquinone oxidoreductase chain N (EC 1.6.5.3) |
Gene: Namu_0987: NADH-ubiquinone oxidoreductase chain N (EC 1.6.5.3) |
Gene: Franean1_6081: NADH-ubiquinone oxidoreductase chain N (EC 1.6.5.3) |
Gene: Francci3_0551: NADH-ubiquinone oxidoreductase chain N (EC 1.6.5.3) |
Gene: Amir_6669: NADH-ubiquinone oxidoreductase chain N (EC 1.6.5.3) |
Gene: Acel_0280: NADH-ubiquinone oxidoreductase chain N (EC 1.6.5.3) |
NADH-ubiquinone oxidoreductase chain N (EC 1.6.5.3) |
| COG0142 |
Gene: SACE_6888: Octaprenyl-diphosphate synthase (EC 2.5.1.-) / Dimethylallyltransferase (EC 2.5.1.1) / Geranyltranstransferase (farnesyldiphosphate synthase) (EC 2.5.1.10) / Geranylgeranyl pyrophosphate synthetase (EC 2.5.1.29) |
|
Gene: PPA1921: Octaprenyl-diphosphate synthase (EC 2.5.1.-) / Dimethylallyltransferase (EC 2.5.1.1) / Geranyltranstransferase (farnesyldiphosphate synthase) (EC 2.5.1.10) / Geranylgeranyl pyrophosphate synthetase (EC 2.5.1.29) |
Gene: Noca_0534: Octaprenyl-diphosphate synthase (EC 2.5.1.-) / Dimethylallyltransferase (EC 2.5.1.1) / Geranyltranstransferase (farnesyldiphosphate synthase) (EC 2.5.1.10) / Geranylgeranyl pyrophosphate synthetase (EC 2.5.1.29) |
Gene: Namu_0988: Octaprenyl-diphosphate synthase (EC 2.5.1.-) / Dimethylallyltransferase (EC 2.5.1.1) / Geranyltranstransferase (farnesyldiphosphate synthase) (EC 2.5.1.10) / Geranylgeranyl pyrophosphate synthetase (EC 2.5.1.29) |
Gene: Franean1_6080: Octaprenyl-diphosphate synthase (EC 2.5.1.-) / Dimethylallyltransferase (EC 2.5.1.1) / Geranyltranstransferase (farnesyldiphosphate synthase) (EC 2.5.1.10) / Geranylgeranyl pyrophosphate synthetase (EC 2.5.1.29) |
Gene: Francci3_0552: Octaprenyl-diphosphate synthase (EC 2.5.1.-) / Dimethylallyltransferase (EC 2.5.1.1) / Geranyltranstransferase (farnesyldiphosphate synthase) (EC 2.5.1.10) / Geranylgeranyl pyrophosphate synthetase (EC 2.5.1.29) |
Gene: Amir_6668: Octaprenyl-diphosphate synthase (EC 2.5.1.-) / Dimethylallyltransferase (EC 2.5.1.1) / Geranyltranstransferase (farnesyldiphosphate synthase) (EC 2.5.1.10) / Geranylgeranyl pyrophosphate synthetase (EC 2.5.1.29) |
Gene: Acel_0281: Octaprenyl-diphosphate synthase (EC 2.5.1.-) / Dimethylallyltransferase (EC 2.5.1.1) / Geranyltranstransferase (farnesyldiphosphate synthase) (EC 2.5.1.10) / Geranylgeranyl pyrophosphate synthetase (EC 2.5.1.29) |
Octaprenyl-diphosphate synthase (EC 2.5.1.-) / Dimethylallyltransferase (EC 2.5.1.1) / Geranyltranstransferase (farnesyldiphosphate synthase) (EC 2.5.1.10) / Geranylgeranyl pyrophosphate synthetase (EC 2.5.1.29) |
| CRON 2. | ||||||||||
| rex |
*
Saccharopolyspora erythraea NRRL 2338 Site: position = -277 score = 5.89317 sequence = TTGTGCATGTGTTCACAA Gene: SACE_6947: Redox-sensitive transcriptional regulator Rex |
*
Saccharomonospora viridis DSM 43017 Site: position = -120 score = 5.39709 sequence = TTGTGCCTACGTTCACAA Gene: Svir_02840: Redox-sensitive transcriptional regulator Rex |
|
*
Nocardioides sp. JS614 Site: position = -118 score = 4.44406 sequence = TTGTTCTCCTGTTCACAA Gene: Noca_0493: Redox-sensitive transcriptional regulator Rex |
*
Nakamurella multipartita DSM 44233 Site: position = -110 score = 5.89919 sequence = TTGTGCACGCGTTCACGA Gene: Namu_0919: Redox-sensitive transcriptional regulator Rex |
*
Frankia sp. EAN1pec Site: position = -226 score = 5.88534 sequence = TCGTGAATACCTTCACGA Gene: Franean1_6132: Redox-sensitive transcriptional regulator Rex |
*
Frankia sp. CcI3 Site: position = -159 score = 5.75667 sequence = TCGTGAATCCCTTCACGA Gene: Francci3_0484: Redox-sensitive transcriptional regulator Rex |
*
Actinosynnema mirum DSM 43827 Site: position = -95 score = 5.6235 sequence = TTGTGCGTGCGTTCACAA Gene: Amir_6731: Redox-sensitive transcriptional regulator Rex |
*
Acidothermus cellulolyticus 11B Site: position = -59 score = 5.6235 sequence = TTGTGCGTGCGTTCACAA Gene: Acel_0239: Redox-sensitive transcriptional regulator Rex |
Redox-sensitive transcriptional regulator Rex |
| hemA |
Gene: SACE_6946: Glutamyl-tRNA reductase (EC 1.2.1.70) |
Gene: Svir_02850: Glutamyl-tRNA reductase (EC 1.2.1.70) |
Gene: PPA0307: Glutamyl-tRNA reductase (EC 1.2.1.70) |
2
Nocardioides sp. JS614 Gene: Noca_1962: Glutamyl-tRNA reductase (EC 1.2.1.70) Gene: Noca_0494: Glutamyl-tRNA reductase (EC 1.2.1.70) |
Gene: Namu_1549: Glutamyl-tRNA reductase (EC 1.2.1.70) |
Gene: Franean1_6131: Glutamyl-tRNA reductase (EC 1.2.1.70) |
Gene: Francci3_0485: Glutamyl-tRNA reductase (EC 1.2.1.70) |
Gene: Amir_6730: Glutamyl-tRNA reductase (EC 1.2.1.70) |
Gene: Acel_0238: Glutamyl-tRNA reductase (EC 1.2.1.70) |
Glutamyl-tRNA reductase (EC 1.2.1.70) |
| hemC |
Gene: SACE_6945: Porphobilinogen deaminase (EC 2.5.1.61) |
Gene: Svir_02860: Porphobilinogen deaminase (EC 2.5.1.61) |
Gene: PPA0304: Porphobilinogen deaminase (EC 2.5.1.61) |
Gene: Noca_0495: Porphobilinogen deaminase (EC 2.5.1.61) |
Gene: Namu_1544: Porphobilinogen deaminase (EC 2.5.1.61) |
Gene: Franean1_6130: Porphobilinogen deaminase (EC 2.5.1.61) |
Gene: Francci3_0486: Porphobilinogen deaminase (EC 2.5.1.61) |
Gene: Amir_6729: Porphobilinogen deaminase (EC 2.5.1.61) |
Gene: Acel_0237: Porphobilinogen deaminase (EC 2.5.1.61) |
Porphobilinogen deaminase (EC 2.5.1.61) |
| hemD |
Gene: SACE_6944: Uroporphyrinogen-III methyltransferase (EC 2.1.1.107) / Uroporphyrinogen-III synthase (EC 4.2.1.75) |
Gene: Svir_02870: Uroporphyrinogen-III methyltransferase (EC 2.1.1.107) / Uroporphyrinogen-III synthase (EC 4.2.1.75) |
|
Gene: Noca_0496: Uroporphyrinogen-III methyltransferase (EC 2.1.1.107) / Uroporphyrinogen-III synthase (EC 4.2.1.75) |
Gene: Namu_0920: Uroporphyrinogen-III methyltransferase (EC 2.1.1.107) / Uroporphyrinogen-III synthase (EC 4.2.1.75) |
Gene: Franean1_6129: Uroporphyrinogen-III methyltransferase (EC 2.1.1.107) / Uroporphyrinogen-III synthase (EC 4.2.1.75) |
Gene: Francci3_0487: Uroporphyrinogen-III methyltransferase (EC 2.1.1.107) / Uroporphyrinogen-III synthase (EC 4.2.1.75) |
Gene: Amir_6728: Uroporphyrinogen-III methyltransferase (EC 2.1.1.107) / Uroporphyrinogen-III synthase (EC 4.2.1.75) |
Gene: Acel_0236: Uroporphyrinogen-III methyltransferase (EC 2.1.1.107) / Uroporphyrinogen-III synthase (EC 4.2.1.75) |
Uroporphyrinogen-III methyltransferase (EC 2.1.1.107) / Uroporphyrinogen-III synthase (EC 4.2.1.75) |
| hemB |
Gene: SACE_6943: Porphobilinogen synthase (EC 4.2.1.24) |
Gene: Svir_02880: Porphobilinogen synthase (EC 4.2.1.24) |
Gene: PPA0302: Porphobilinogen synthase (EC 4.2.1.24) |
Gene: Noca_0497: Porphobilinogen synthase (EC 4.2.1.24) |
Gene: Namu_1542: Porphobilinogen synthase (EC 4.2.1.24) |
Gene: Franean1_6128: Porphobilinogen synthase (EC 4.2.1.24) |
Gene: Francci3_0488: Porphobilinogen synthase (EC 4.2.1.24) |
Gene: Amir_6727: Porphobilinogen synthase (EC 4.2.1.24) |
Gene: Acel_0235: Porphobilinogen synthase (EC 4.2.1.24) |
Porphobilinogen synthase (EC 4.2.1.24) |
| CRON 3. | ||||||||||
| whiB |
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Saccharopolyspora erythraea NRRL 2338 Site: position = -104 score = 6.00976 sequence = TCGTGAAAGCATTCACAA Site: position = -75 score = 5.36099 sequence = CCGTGAAAGCATTCACAA Gene: SACE_6426: WhiB-family transcriptional regulator involved in differentiation and sporulation |
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Saccharomonospora viridis DSM 43017 Site: position = -87 score = 6.00976 sequence = TCGTGAAAGCATTCACAA Gene: Svir_30700: WhiB-family transcriptional regulator involved in differentiation and sporulation |
Gene: PPA1264: WhiB-family transcriptional regulator involved in differentiation and sporulation |
*
Nocardioides sp. JS614 Site: position = -100 score = 5.32085 sequence = TCGTGAATGCGTTCACTT Gene: Noca_1713: WhiB-family transcriptional regulator involved in differentiation and sporulation |
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Nakamurella multipartita DSM 44233 Site: position = -109 score = 5.70605 sequence = ATGTGAAAGCATTCACAA Gene: Namu_1412: WhiB-family transcriptional regulator involved in differentiation and sporulation |
Gene: Franean1_0971: WhiB-family transcriptional regulator involved in differentiation and sporulation |
Gene: Francci3_3759: WhiB-family transcriptional regulator involved in differentiation and sporulation |
*
Actinosynnema mirum DSM 43827 Site: position = -85 score = 6.00976 sequence = TCGTGAAAGCATTCACAA Gene: Amir_6289: WhiB-family transcriptional regulator involved in differentiation and sporulation |
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Acidothermus cellulolyticus 11B Site: position = -158 score = 5.58442 sequence = TCGTGAAACTATTCACAA Gene: Acel_0560: WhiB-family transcriptional regulator involved in differentiation and sporulation |
WhiB-family transcriptional regulator involved in differentiation and sporulation |
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |