Regulon of Rex in Frankia sp. EAN1pec

Properties
Regulator type:	Transcription factor
TF locus tag:	Franean1_6132
Regulator family:	Rex
Regulation mode:	repressor
Biological process:	Energy metabolism
Effector:	NADH
Regulog:	Rex - Frankineae/Propionibacterineae/Pseudonocardiaceae
Statistics of regulated genes:
- Genes	21
- Operons	2
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 26 sites [see more]

Member of regulog collections

By taxonomy - Frankineae/Propionibacterineae/Pseudonocardiaceae
By trascription factor - Rex
By TF family - Rex
By effector - NADH
By pathway - Energy metabolism

Regulated operons
	Locus Tag	Name	Function
Position: -85 Score: 5.5 Sequence: TCGTGAAGAATTTCACGA Locus tag: Franean1_6095 Name: COG0644 Funciton: Putative NAD-dependent reductase, COG0644 Locus tag: Franean1_6094 Name: nuoA Funciton: NADH ubiquinone oxidoreductase chain A (EC 1.6.5.3) Locus tag: Franean1_6093 Name: nuoB Funciton: NADH-ubiquinone oxidoreductase chain B (EC 1.6.5.3) Locus tag: Franean1_6092 Name: nuoC Funciton: NADH-ubiquinone oxidoreductase chain C (EC 1.6.5.3) Locus tag: Franean1_6091 Name: nuoD Funciton: NADH-ubiquinone oxidoreductase chain D (EC 1.6.5.3) Locus tag: Franean1_6090 Name: nuoE Funciton: NADH-ubiquinone oxidoreductase chain E (EC 1.6.5.3) Locus tag: Franean1_6089 Name: nuoF Funciton: NADH-ubiquinone oxidoreductase chain F (EC 1.6.5.3) Locus tag: Franean1_6088 Name: nuoG Funciton: NADH-ubiquinone oxidoreductase chain G (EC 1.6.5.3) Locus tag: Franean1_6087 Name: nuoH Funciton: NADH-ubiquinone oxidoreductase chain H (EC 1.6.5.3) Locus tag: Franean1_6086 Name: nuoI Funciton: NADH-ubiquinone oxidoreductase chain I (EC 1.6.5.3) Locus tag: Franean1_6085 Name: nuoJ Funciton: NADH-ubiquinone oxidoreductase chain J (EC 1.6.5.3) Locus tag: Franean1_6084 Name: nuoK Funciton: NADH-ubiquinone oxidoreductase chain K (EC 1.6.5.3) Locus tag: Franean1_6083 Name: nuoL Funciton: NADH-ubiquinone oxidoreductase chain L (EC 1.6.5.3) Locus tag: Franean1_6082 Name: nuoM Funciton: NADH-ubiquinone oxidoreductase chain M (EC 1.6.5.3) Locus tag: Franean1_6081 Name: nuoN Funciton: NADH-ubiquinone oxidoreductase chain N (EC 1.6.5.3) Locus tag: Franean1_6080 Name: COG0142 Funciton: Octaprenyl-diphosphate synthase (EC 2.5.1.-) / Dimethylallyltransferase (EC 2.5.1.1) / Geranyltranstransferase (farnesyldiphosphate synthase) (EC 2.5.1.10) / Geranylgeranyl pyrophosphate synthetase (EC 2.5.1.29)
	Franean1_6095	COG0644	Putative NAD-dependent reductase, COG0644
	Franean1_6094	nuoA	NADH ubiquinone oxidoreductase chain A (EC 1.6.5.3)
	Franean1_6093	nuoB	NADH-ubiquinone oxidoreductase chain B (EC 1.6.5.3)
	Franean1_6092	nuoC	NADH-ubiquinone oxidoreductase chain C (EC 1.6.5.3)
	Franean1_6091	nuoD	NADH-ubiquinone oxidoreductase chain D (EC 1.6.5.3)
	Franean1_6090	nuoE	NADH-ubiquinone oxidoreductase chain E (EC 1.6.5.3)
	Franean1_6089	nuoF	NADH-ubiquinone oxidoreductase chain F (EC 1.6.5.3)
	Franean1_6088	nuoG	NADH-ubiquinone oxidoreductase chain G (EC 1.6.5.3)
	Franean1_6087	nuoH	NADH-ubiquinone oxidoreductase chain H (EC 1.6.5.3)
	Franean1_6086	nuoI	NADH-ubiquinone oxidoreductase chain I (EC 1.6.5.3)
	Franean1_6085	nuoJ	NADH-ubiquinone oxidoreductase chain J (EC 1.6.5.3)
	Franean1_6084	nuoK	NADH-ubiquinone oxidoreductase chain K (EC 1.6.5.3)
	Franean1_6083	nuoL	NADH-ubiquinone oxidoreductase chain L (EC 1.6.5.3)
	Franean1_6082	nuoM	NADH-ubiquinone oxidoreductase chain M (EC 1.6.5.3)
	Franean1_6081	nuoN	NADH-ubiquinone oxidoreductase chain N (EC 1.6.5.3)
	Franean1_6080	COG0142	Octaprenyl-diphosphate synthase (EC 2.5.1.-) / Dimethylallyltransferase (EC 2.5.1.1) / Geranyltranstransferase (farnesyldiphosphate synthase) (EC 2.5.1.10) / Geranylgeranyl pyrophosphate synthetase (EC 2.5.1.29)
Position: -226 Score: 5.9 Sequence: TCGTGAATACCTTCACGA Locus tag: Franean1_6132 Name: rex Funciton: Redox-sensitive transcriptional regulator Rex Locus tag: Franean1_6131 Name: hemA Funciton: Glutamyl-tRNA reductase (EC 1.2.1.70) Locus tag: Franean1_6130 Name: hemC Funciton: Porphobilinogen deaminase (EC 2.5.1.61) Locus tag: Franean1_6129 Name: hemD Funciton: Uroporphyrinogen-III methyltransferase (EC 2.1.1.107) / Uroporphyrinogen-III synthase (EC 4.2.1.75) Locus tag: Franean1_6128 Name: hemB Funciton: Porphobilinogen synthase (EC 4.2.1.24)
	Franean1_6132	rex	Redox-sensitive transcriptional regulator Rex
	Franean1_6131	hemA	Glutamyl-tRNA reductase (EC 1.2.1.70)
	Franean1_6130	hemC	Porphobilinogen deaminase (EC 2.5.1.61)
	Franean1_6129	hemD	Uroporphyrinogen-III methyltransferase (EC 2.1.1.107) / Uroporphyrinogen-III synthase (EC 4.2.1.75)
	Franean1_6128	hemB	Porphobilinogen synthase (EC 4.2.1.24)

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --

Regulon of Rex in Frankia sp. EAN1pec

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --