Regulon of Rex in Actinosynnema mirum DSM 43827

Properties
Regulator type:	Transcription factor
TF locus tag:	Amir_6731
Regulator family:	Rex
Regulation mode:	repressor
Biological process:	Energy metabolism
Effector:	NADH
Regulog:	Rex - Frankineae/Propionibacterineae/Pseudonocardiaceae
Statistics of regulated genes:
- Genes	21
- Operons	4
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 26 sites [see more]

Member of regulog collections

By taxonomy - Frankineae/Propionibacterineae/Pseudonocardiaceae
By trascription factor - Rex
By TF family - Rex
By effector - NADH
By pathway - Energy metabolism

Regulated operons
	Locus Tag	Name	Function
Position: -27 Score: 5.7 Sequence: TTGTGAACAAGTGCACAA Locus tag: Amir_6683 Name: COG0644 Funciton: Putative NAD-dependent reductase, COG0644
	Amir_6683	COG0644	Putative NAD-dependent reductase, COG0644
Position: -167 Score: 5.4 Sequence: ATGTGAATCACTTCACAA Position: -135 Score: 6.1 Sequence: TTGTGAAGGCTTTCACAA Locus tag: Amir_6682 Name: nuoA Funciton: NADH ubiquinone oxidoreductase chain A (EC 1.6.5.3) Locus tag: Amir_6681 Name: nuoB Funciton: NADH-ubiquinone oxidoreductase chain B (EC 1.6.5.3) Locus tag: Amir_6680 Name: nuoC Funciton: NADH-ubiquinone oxidoreductase chain C (EC 1.6.5.3) Locus tag: Amir_6679 Name: nuoD Funciton: NADH-ubiquinone oxidoreductase chain D (EC 1.6.5.3) Locus tag: Amir_6678 Name: nuoE Funciton: NADH-ubiquinone oxidoreductase chain E (EC 1.6.5.3) Locus tag: Amir_6677 Name: nuoF Funciton: NADH-ubiquinone oxidoreductase chain F (EC 1.6.5.3) Locus tag: Amir_6676 Name: nuoG Funciton: NADH-ubiquinone oxidoreductase chain G (EC 1.6.5.3) Locus tag: Amir_6675 Name: nuoH Funciton: NADH-ubiquinone oxidoreductase chain H (EC 1.6.5.3) Locus tag: Amir_6674 Name: nuoI Funciton: NADH-ubiquinone oxidoreductase chain I (EC 1.6.5.3) Locus tag: Amir_6673 Name: nuoJ Funciton: NADH-ubiquinone oxidoreductase chain J (EC 1.6.5.3) Locus tag: Amir_6672 Name: nuoK Funciton: NADH-ubiquinone oxidoreductase chain K (EC 1.6.5.3) Locus tag: Amir_6671 Name: nuoL Funciton: NADH-ubiquinone oxidoreductase chain L (EC 1.6.5.3) Locus tag: Amir_6670 Name: nuoM Funciton: NADH-ubiquinone oxidoreductase chain M (EC 1.6.5.3) Locus tag: Amir_6669 Name: nuoN Funciton: NADH-ubiquinone oxidoreductase chain N (EC 1.6.5.3) Locus tag: Amir_6668 Name: COG0142 Funciton: Octaprenyl-diphosphate synthase (EC 2.5.1.-) / Dimethylallyltransferase (EC 2.5.1.1) / Geranyltranstransferase (farnesyldiphosphate synthase) (EC 2.5.1.10) / Geranylgeranyl pyrophosphate synthetase (EC 2.5.1.29)
	Amir_6682	nuoA	NADH ubiquinone oxidoreductase chain A (EC 1.6.5.3)
	Amir_6681	nuoB	NADH-ubiquinone oxidoreductase chain B (EC 1.6.5.3)
	Amir_6680	nuoC	NADH-ubiquinone oxidoreductase chain C (EC 1.6.5.3)
	Amir_6679	nuoD	NADH-ubiquinone oxidoreductase chain D (EC 1.6.5.3)
	Amir_6678	nuoE	NADH-ubiquinone oxidoreductase chain E (EC 1.6.5.3)
	Amir_6677	nuoF	NADH-ubiquinone oxidoreductase chain F (EC 1.6.5.3)
	Amir_6676	nuoG	NADH-ubiquinone oxidoreductase chain G (EC 1.6.5.3)
	Amir_6675	nuoH	NADH-ubiquinone oxidoreductase chain H (EC 1.6.5.3)
	Amir_6674	nuoI	NADH-ubiquinone oxidoreductase chain I (EC 1.6.5.3)
	Amir_6673	nuoJ	NADH-ubiquinone oxidoreductase chain J (EC 1.6.5.3)
	Amir_6672	nuoK	NADH-ubiquinone oxidoreductase chain K (EC 1.6.5.3)
	Amir_6671	nuoL	NADH-ubiquinone oxidoreductase chain L (EC 1.6.5.3)
	Amir_6670	nuoM	NADH-ubiquinone oxidoreductase chain M (EC 1.6.5.3)
	Amir_6669	nuoN	NADH-ubiquinone oxidoreductase chain N (EC 1.6.5.3)
	Amir_6668	COG0142	Octaprenyl-diphosphate synthase (EC 2.5.1.-) / Dimethylallyltransferase (EC 2.5.1.1) / Geranyltranstransferase (farnesyldiphosphate synthase) (EC 2.5.1.10) / Geranylgeranyl pyrophosphate synthetase (EC 2.5.1.29)
Position: -85 Score: 6 Sequence: TCGTGAAAGCATTCACAA Locus tag: Amir_6289 Name: whiB Funciton: WhiB-family transcriptional regulator involved in differentiation and sporulation
	Amir_6289	whiB	WhiB-family transcriptional regulator involved in differentiation and sporulation
Position: -95 Score: 5.6 Sequence: TTGTGCGTGCGTTCACAA Locus tag: Amir_6731 Name: rex Funciton: Redox-sensitive transcriptional regulator Rex Locus tag: Amir_6730 Name: hemA Funciton: Glutamyl-tRNA reductase (EC 1.2.1.70) Locus tag: Amir_6729 Name: hemC Funciton: Porphobilinogen deaminase (EC 2.5.1.61) Locus tag: Amir_6728 Name: hemD Funciton: Uroporphyrinogen-III methyltransferase (EC 2.1.1.107) / Uroporphyrinogen-III synthase (EC 4.2.1.75)
	Amir_6731	rex	Redox-sensitive transcriptional regulator Rex
	Amir_6730	hemA	Glutamyl-tRNA reductase (EC 1.2.1.70)
	Amir_6729	hemC	Porphobilinogen deaminase (EC 2.5.1.61)
	Amir_6728	hemD	Uroporphyrinogen-III methyltransferase (EC 2.1.1.107) / Uroporphyrinogen-III synthase (EC 4.2.1.75)

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Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --

Regulon of Rex in Actinosynnema mirum DSM 43827

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --