Statistics of regulated genes

Genome	Genes	Operons
Photobacterium profundum SS9	4	2
Vibrio angustum S14	4	2
Vibrio cholerae O1 biovar eltor str. N16961
Vibrio fischeri ES114	6	4
Vibrio harveyi ATCC BAA-1116	1	1
Vibrio parahaemolyticus RIMD 2210633	3	2
Vibrio salmonicida LFI1238
Vibrio shilonii AK1	4	2
Vibrio splendidus LGP32
Vibrio vulnificus CMCP6	6	2

Clusters of co-Regulated Orthologous operoNs (CRONs)

Genes											Function
CRON 1.
ebgR	* Photobacterium profundum SS9 Site: position = -191 score = 5.34455 sequence = GATAATTTTACTAAAACATCA Gene: PBPRA2083: Evolved beta-D-galactosidase transcriptional repressor, LacI family	* Vibrio angustum S14 Site: position = -109 score = 5.69497 sequence = AAAGTTTTTACTAAAAAAATT Site: position = -159 score = 4.60357 sequence = ATATTTATTATTATATTTTTT Site: position = -162 score = 4.51126 sequence = AATATATTTATTATTATATTT Gene: VAS14_15119: Evolved beta-D-galactosidase transcriptional repressor, LacI family	Vibrio cholerae O1 biovar eltor str. N16961	* Vibrio fischeri ES114 Site: position = -92 score = 4.91491 sequence = TAAAACTTTAGTAAAAGCCAT Gene: VF_A0348: Evolved beta-D-galactosidase transcriptional repressor, LacI family	* Vibrio harveyi ATCC BAA-1116 Site: position = -104 score = 5.38777 sequence = CACAGTTTTACTAAAAATTTG Gene: VIBHAR_03334: Evolved beta-D-galactosidase transcriptional repressor, LacI family	* Vibrio parahaemolyticus RIMD 2210633 Site: position = -102 score = 5.11275 sequence = CTCGATTTTACTAAAAGTTTG Gene: VP2402: Evolved beta-D-galactosidase transcriptional repressor, LacI family	Vibrio salmonicida LFI1238	* Vibrio shilonii AK1 Site: position = -104 score = 5.10152 sequence = GCTGTTTTTACTAAAATTTTA Gene: VSAK1_18699: Evolved beta-D-galactosidase transcriptional repressor, LacI family	Vibrio splendidus LGP32	* Vibrio vulnificus CMCP6 Site: position = -102 score = 4.28684 sequence = TCGATTTTTACTAAAAAAACG Gene: VV1_1769: Evolved beta-D-galactosidase transcriptional repressor, LacI family	Evolved beta-D-galactosidase transcriptional repressor, LacI family
CRON 2.
ebgA	* Photobacterium profundum SS9 Site: position = -53 score = 4.2333 sequence = AAAACTTTAACTAACATAGCT Site: position = -65 score = 5.85953 sequence = ATTTATTTTACTAAAACTTTA Site: position = -332 score = 5.51316 sequence = TTGTATTTTACTAAAATTTAA Site: position = -78 score = 4.27578 sequence = AACAGATTTACCAATTTATTT Gene: PBPRA2084: Evolved beta-D-galactosidase, alpha subunit	* Vibrio angustum S14 Site: position = -118 score = 4.27045 sequence = AACGTTTTCACTAATTTATTT Site: position = -93 score = 5.7158 sequence = AAAACTTTTACTAAAATCGTT Site: position = -105 score = 6.05123 sequence = ATTTATTTTAGTAAAACTTTT Gene: VAS14_15114: Evolved beta-D-galactosidase, alpha subunit	Vibrio cholerae O1 biovar eltor str. N16961	* Vibrio fischeri ES114 Site: position = -67 score = 4.25079 sequence = GAGTTATTTACTACGATTTAT Site: position = -96 score = 4.45474 sequence = TAAAACTTTAGTTAATATCTT Site: position = -107 score = 5.74268 sequence = ATTTGTTTTACTAAAACTTTA Gene: VF_A0347: Evolved beta-D-galactosidase, alpha subunit	Vibrio harveyi ATCC BAA-1116 Gene: VIBHAR_03337: Evolved beta-D-galactosidase, alpha subunit	* Vibrio parahaemolyticus RIMD 2210633 Site: position = -168 score = 4.27045 sequence = AACGTTTTCACTAATTTATTT Site: position = -155 score = 6.05123 sequence = ATTTATTTTAGTAAAACTTTT Site: position = -143 score = 5.69517 sequence = AAAACTTTTACTAATATCTTT Gene: VP2403: Evolved beta-D-galactosidase, alpha subunit	Vibrio salmonicida LFI1238	* Vibrio shilonii AK1 Site: position = -98 score = 6.21684 sequence = ATATATTTTAGTAAAACTTTT Site: position = -86 score = 5.60403 sequence = AAAACTTTTACTAAAATTACC Gene: VSAK1_18704: Evolved beta-D-galactosidase, alpha subunit	Vibrio splendidus LGP32	* Vibrio vulnificus CMCP6 Site: position = -95 score = 5.90566 sequence = AAAAGTTTTACTAATATATTT Site: position = -107 score = 5.22269 sequence = ATTCTATTTAGTAAAAGTTTT Gene: VV1_1767: Evolved beta-D-galactosidase, alpha subunit	Evolved beta-D-galactosidase, alpha subunit
ebgC	Photobacterium profundum SS9 Gene: PBPRA2085: Evolved beta-D-galactosidase, beta subunit	Vibrio angustum S14 Gene: VAS14_15109: Evolved beta-D-galactosidase, beta subunit	Vibrio cholerae O1 biovar eltor str. N16961	Vibrio fischeri ES114 Gene: VF_A0346: Evolved beta-D-galactosidase, beta subunit	Vibrio harveyi ATCC BAA-1116 Gene: VIBHAR_03338: Evolved beta-D-galactosidase, beta subunit	Vibrio parahaemolyticus RIMD 2210633 Gene: VP2404: Evolved beta-D-galactosidase, beta subunit	Vibrio salmonicida LFI1238	Vibrio shilonii AK1 Gene: VSAK1_18709: Evolved beta-D-galactosidase, beta subunit	Vibrio splendidus LGP32	Vibrio vulnificus CMCP6 Gene: VV1_1766: Evolved beta-D-galactosidase, beta subunit	Evolved beta-D-galactosidase, beta subunit
ygjI	Photobacterium profundum SS9 Gene: PBPRA2086: predicted beta-galactoside transporter, AAP family	Vibrio angustum S14 Gene: VAS14_15104: predicted beta-galactoside transporter, AAP family	Vibrio cholerae O1 biovar eltor str. N16961	*2 Vibrio fischeri ES114 Site: position = -71 score = 5.34319 sequence = CTATAATTTACTAAAAGTTAC Site: position = -81 score = 4.8523 sequence = AAATTAATTACTATAATTTAC Site: position = -94 score = 5.85402 sequence = GTAACTTTTAGTAAAATTAAT Gene: VF_A0340: predicted beta-galactoside transporter, AAP family Gene: VF_A0345: predicted beta-galactoside transporter, AAP family	Vibrio harveyi ATCC BAA-1116 Gene: VIBHAR_03339: predicted beta-galactoside transporter, AAP family	Vibrio parahaemolyticus RIMD 2210633	Vibrio salmonicida LFI1238	Vibrio shilonii AK1 Gene: VSAK1_18714: predicted beta-galactoside transporter, AAP family	Vibrio splendidus LGP32	2 Vibrio vulnificus CMCP6 Gene: VV1_1765: predicted beta-galactoside transporter, AAP family Gene: VV1_1764: predicted beta-galactoside transporter, AAP family	predicted beta-galactoside transporter, AAP family
SSF48208	Photobacterium profundum SS9	Vibrio angustum S14	Vibrio cholerae O1 biovar eltor str. N16961	* Vibrio fischeri ES114 Site: position = -45 score = 5.50685 sequence = GTTAAATTTAGTAAAACTTTA Gene: VF_A0338: putative glucosyl hydrolase precursor	Vibrio harveyi ATCC BAA-1116	Vibrio parahaemolyticus RIMD 2210633	Vibrio salmonicida LFI1238	Vibrio shilonii AK1	Vibrio splendidus LGP32	Vibrio vulnificus CMCP6 Gene: VV1_1763: putative glucosyl hydrolase precursor	putative glucosyl hydrolase precursor

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