Regulon of EbgR in Vibrio fischeri ES114

Properties
Regulator type:	Transcription factor
TF locus tag:	VF_A0348
Regulator family:	LacI
Regulation mode:	repressor
Biological process:	Galactosides utilization
Effector:	Beta-galactosides
Regulog:	EbgR - Vibrionales
Statistics of regulated genes:
- Genes	6
- Operons	4
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 30 sites [see more]

Member of regulog collections

By taxonomy - Vibrionales
By TF family - LacI
By effector - Beta-galactosides
By pathway - Galactosides utilization

Regulated operons
	Locus Tag	Name	Function
Position: -45 Score: 5.5 Sequence: GTTAAATTTAGTAAAACTTTA Locus tag: VF_A0338 Name: SSF48208 Funciton: putative glucosyl hydrolase precursor
	VF_A0338	SSF48208	putative glucosyl hydrolase precursor
Position: -92 Score: 4.9 Sequence: TAAAACTTTAGTAAAAGCCAT Locus tag: VF_A0348 Name: ebgR Funciton: Evolved beta-D-galactosidase transcriptional repressor, LacI family
	VF_A0348	ebgR	Evolved beta-D-galactosidase transcriptional repressor, LacI family
Position: -107 Score: 5.7 Sequence: ATTTGTTTTACTAAAACTTTA Position: -96 Score: 4.5 Sequence: TAAAACTTTAGTTAATATCTT Position: -67 Score: 4.3 Sequence: GAGTTATTTACTACGATTTAT Locus tag: VF_A0347 Name: ebgA Funciton: Evolved beta-D-galactosidase, alpha subunit Locus tag: VF_A0346 Name: ebgC Funciton: Evolved beta-D-galactosidase, beta subunit Locus tag: VF_A0345 Name: ygjI Funciton: predicted beta-galactoside transporter, AAP family
	VF_A0347	ebgA	Evolved beta-D-galactosidase, alpha subunit
	VF_A0346	ebgC	Evolved beta-D-galactosidase, beta subunit
	VF_A0345	ygjI	predicted beta-galactoside transporter, AAP family
Position: -94 Score: 5.9 Sequence: GTAACTTTTAGTAAAATTAAT Position: -81 Score: 4.9 Sequence: AAATTAATTACTATAATTTAC Position: -71 Score: 5.3 Sequence: CTATAATTTACTAAAAGTTAC Locus tag: VF_A0340 Name: ygjI Funciton: predicted beta-galactoside transporter, AAP family
	VF_A0340	ygjI	predicted beta-galactoside transporter, AAP family

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD