Regulon of EbgR in Vibrio fischeri ES114
| Regulator type: | Transcription factor |
| TF locus tag: | VF_A0348 |
| Regulator family: | LacI |
| Regulation mode: | repressor |
| Biological process: | Galactosides utilization |
| Effector: | Beta-galactosides |
| Regulog: | EbgR - Vibrionales |
| Statistics of regulated genes: | |
| - Genes | 6 |
| - Operons | 4 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Vibrionales
- By TF family - LacI
- By effector - Beta-galactosides
- By pathway - Galactosides utilization
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -45
Score: 5.5 Sequence: GTTAAATTTAGTAAAACTTTA
Locus tag: VF_A0338
Name: SSF48208 Funciton: putative glucosyl hydrolase precursor |
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SSF48208
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putative glucosyl hydrolase precursor
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Position: -92
Score: 4.9 Sequence: TAAAACTTTAGTAAAAGCCAT
Locus tag: VF_A0348
Name: ebgR Funciton: Evolved beta-D-galactosidase transcriptional repressor, LacI family |
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ebgR
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Evolved beta-D-galactosidase transcriptional repressor, LacI family
|
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Position: -107
Score: 5.7 Sequence: ATTTGTTTTACTAAAACTTTA
Position: -96
Score: 4.5 Sequence: TAAAACTTTAGTTAATATCTT
Position: -67
Score: 4.3 Sequence: GAGTTATTTACTACGATTTAT
Locus tag: VF_A0347
Name: ebgA Funciton: Evolved beta-D-galactosidase, alpha subunit
Locus tag: VF_A0346
Name: ebgC Funciton: Evolved beta-D-galactosidase, beta subunit
Locus tag: VF_A0345
Name: ygjI Funciton: predicted beta-galactoside transporter, AAP family |
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ebgA
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Evolved beta-D-galactosidase, alpha subunit
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ebgC
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Evolved beta-D-galactosidase, beta subunit
|
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ygjI
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predicted beta-galactoside transporter, AAP family
|
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Position: -94
Score: 5.9 Sequence: GTAACTTTTAGTAAAATTAAT
Position: -81
Score: 4.9 Sequence: AAATTAATTACTATAATTTAC
Position: -71
Score: 5.3 Sequence: CTATAATTTACTAAAAGTTAC
Locus tag: VF_A0340
Name: ygjI Funciton: predicted beta-galactoside transporter, AAP family |
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ygjI
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predicted beta-galactoside transporter, AAP family
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |