Regulog Mll1683 - Rhizobiales

Properties
Regulator type:	Transcription factor
Regulator family:	LacI
Regulation mode:
Biological process:	Sugar utilization
Effector:
Phylum:	Proteobacteria/Alpha
Visualization:
	Allows to visualize regulog content in the context of metabolic pathways

Built upon 16 sites [see more]

Member of regulog collections

By taxonomy - Rhizobiales
By TF family - LacI
By pathway - Sugar utilization

Statistics of regulated genes
Genome	Genes	Operons
Agrobacterium tumefaciens str. C58 (Cereon)
Azorhizobium caulinodans ORS 571
Bartonella quintana str. Toulouse
Bradyrhizobium japonicum USDA 110	9	3
Bradyrhizobium sp. BTAi1	9	3
Brucella melitensis 16M
Mesorhizobium loti MAFF303099	4	1
Mesorhizobium sp. BNC1
Nitrobacter winogradskyi Nb-255
Rhizobium etli CFN 42	5	2
Rhizobium leguminosarum bv. viciae 3841	5	2
Rhizobium sp. NGR234	4	1
Rhodopseudomonas palustris CGA009
Sinorhizobium meliloti 1021
Xanthobacter autotrophicus Py2

Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes																Function

CRON 1.
COG0129	Agrobacterium tumefaciens str. C58 (Cereon) Gene: Atu3219: L-arabonate dehydratase	Azorhizobium caulinodans ORS 571 Gene: AZC_3752: L-arabonate dehydratase	Bartonella quintana str. Toulouse	* Bradyrhizobium japonicum USDA 110 Site: position = -153 score = 5.56744 sequence = AAATGGTAGCGTTACCAAGT Gene: bll3915: L-arabonate dehydratase	* Bradyrhizobium sp. BTAi1 Site: position = -188 score = 5.81013 sequence = AAATGGTAGCGCAACCAAAA Gene: BBta_3551: L-arabonate dehydratase	Brucella melitensis 16M Gene: BMEII0356: L-arabonate dehydratase	Mesorhizobium loti MAFF303099 Gene: mlr5404: L-arabonate dehydratase	Mesorhizobium sp. BNC1	Nitrobacter winogradskyi Nb-255	Rhizobium etli CFN 42	Rhizobium leguminosarum bv. viciae 3841	Rhizobium sp. NGR234	Rhodopseudomonas palustris CGA009 Gene: RPA3472: L-arabonate dehydratase	Sinorhizobium meliloti 1021	Xanthobacter autotrophicus Py2 Gene: Xaut_1998: L-arabonate dehydratase	L-arabonate dehydratase
COG4221	Agrobacterium tumefaciens str. C58 (Cereon)	Azorhizobium caulinodans ORS 571	Bartonella quintana str. Toulouse	Bradyrhizobium japonicum USDA 110 Gene: bll3914: 2-keto-3-deoxy-L-fuconate dehydrogenase	Bradyrhizobium sp. BTAi1 Gene: BBta_3550: 2-keto-3-deoxy-L-fuconate dehydrogenase	Brucella melitensis 16M	Mesorhizobium loti MAFF303099	Mesorhizobium sp. BNC1	Nitrobacter winogradskyi Nb-255	Rhizobium etli CFN 42	Rhizobium leguminosarum bv. viciae 3841	Rhizobium sp. NGR234	Rhodopseudomonas palustris CGA009 Gene: RPA3473: 2-keto-3-deoxy-L-fuconate dehydrogenase	Sinorhizobium meliloti 1021	Xanthobacter autotrophicus Py2	2-keto-3-deoxy-L-fuconate dehydrogenase
COG1028	Agrobacterium tumefaciens str. C58 (Cereon) Gene: Atu3813: 2-keto-3-deoxy-L-fuconate dehydrogenase	Azorhizobium caulinodans ORS 571	Bartonella quintana str. Toulouse	Bradyrhizobium japonicum USDA 110 Gene: bll3913: 2-keto-3-deoxy-L-fuconate dehydrogenase	Bradyrhizobium sp. BTAi1 Gene: BBta_3549: 2-keto-3-deoxy-L-fuconate dehydrogenase	Brucella melitensis 16M	Mesorhizobium loti MAFF303099	Mesorhizobium sp. BNC1	Nitrobacter winogradskyi Nb-255	Rhizobium etli CFN 42	Rhizobium leguminosarum bv. viciae 3841 Gene: RL2674: 2-keto-3-deoxy-L-fuconate dehydrogenase	Rhizobium sp. NGR234	Rhodopseudomonas palustris CGA009 Gene: RPA3474: 2-keto-3-deoxy-L-fuconate dehydrogenase	Sinorhizobium meliloti 1021	Xanthobacter autotrophicus Py2 Gene: Xaut_1907: 2-keto-3-deoxy-L-fuconate dehydrogenase	2-keto-3-deoxy-L-fuconate dehydrogenase

CRON 2.
mll1682	Agrobacterium tumefaciens str. C58 (Cereon)	Azorhizobium caulinodans ORS 571	Bartonella quintana str. Toulouse	Bradyrhizobium japonicum USDA 110	Bradyrhizobium sp. BTAi1	Brucella melitensis 16M	* Mesorhizobium loti MAFF303099 Site: position = -313 score = 5.92501 sequence = CTATGGTAGCGCTACCATTT Gene: mll1682: sugar ABC transporter, substrate-binding protein	Mesorhizobium sp. BNC1	Nitrobacter winogradskyi Nb-255	* Rhizobium etli CFN 42 Site: position = -131 score = 4.84467 sequence = GTTTGACTGCGCTGTCAACT Site: position = -154 score = 5.14485 sequence = AGTTGATAGCGCTAGCAAAT Gene: RHE_CH01787: sugar ABC transporter, substrate-binding protein	* Rhizobium leguminosarum bv. viciae 3841 Site: position = -131 score = 5.15276 sequence = ATTTGACAGCGCTGTCAACT Site: position = -154 score = 4.68399 sequence = AGTTGACAGCGCTAGCAGAT Gene: RL1996: sugar ABC transporter, substrate-binding protein	* Rhizobium sp. NGR234 Site: position = -262 score = 6.00208 sequence = TATTGGTAGCGCTACCATTT Gene: NGR_b21720: sugar ABC transporter, substrate-binding protein	Rhodopseudomonas palustris CGA009	Sinorhizobium meliloti 1021	Xanthobacter autotrophicus Py2	sugar ABC transporter, substrate-binding protein
mll1680	Agrobacterium tumefaciens str. C58 (Cereon)	Azorhizobium caulinodans ORS 571	Bartonella quintana str. Toulouse	Bradyrhizobium japonicum USDA 110	Bradyrhizobium sp. BTAi1	Brucella melitensis 16M	Mesorhizobium loti MAFF303099 Gene: mll1680: sugar ABC transporter, ATP-binding protein	Mesorhizobium sp. BNC1	Nitrobacter winogradskyi Nb-255	Rhizobium etli CFN 42 Gene: RHE_CH01788: sugar ABC transporter, ATP-binding protein	Rhizobium leguminosarum bv. viciae 3841 Gene: RL1997: sugar ABC transporter, ATP-binding protein	Rhizobium sp. NGR234 Gene: NGR_b21710: sugar ABC transporter, ATP-binding protein	Rhodopseudomonas palustris CGA009	Sinorhizobium meliloti 1021	Xanthobacter autotrophicus Py2	sugar ABC transporter, ATP-binding protein
mll1679	Agrobacterium tumefaciens str. C58 (Cereon)	Azorhizobium caulinodans ORS 571	Bartonella quintana str. Toulouse	Bradyrhizobium japonicum USDA 110	Bradyrhizobium sp. BTAi1	Brucella melitensis 16M	Mesorhizobium loti MAFF303099 Gene: mll1679: sugar ABC transporter, permease protein	Mesorhizobium sp. BNC1	Nitrobacter winogradskyi Nb-255	Rhizobium etli CFN 42 Gene: RHE_CH01789: sugar ABC transporter, permease protein	Rhizobium leguminosarum bv. viciae 3841 Gene: RL1998: sugar ABC transporter, permease protein	Rhizobium sp. NGR234 Gene: NGR_b21700: sugar ABC transporter, permease protein	Rhodopseudomonas palustris CGA009	Sinorhizobium meliloti 1021	Xanthobacter autotrophicus Py2	sugar ABC transporter, permease protein
mll1678	Agrobacterium tumefaciens str. C58 (Cereon)	Azorhizobium caulinodans ORS 571	Bartonella quintana str. Toulouse	Bradyrhizobium japonicum USDA 110	Bradyrhizobium sp. BTAi1	Brucella melitensis 16M	Mesorhizobium loti MAFF303099 Gene: mll1678: sugar ABC transporter, permease protein	Mesorhizobium sp. BNC1	Nitrobacter winogradskyi Nb-255	Rhizobium etli CFN 42 Gene: RHE_CH01790: sugar ABC transporter, permease protein	Rhizobium leguminosarum bv. viciae 3841 Gene: RL1999: sugar ABC transporter, permease protein	Rhizobium sp. NGR234 Gene: NGR_b21690: sugar ABC transporter, permease protein	Rhodopseudomonas palustris CGA009	Sinorhizobium meliloti 1021	Xanthobacter autotrophicus Py2	sugar ABC transporter, permease protein

CRON 3.
mll1683	Agrobacterium tumefaciens str. C58 (Cereon)	Azorhizobium caulinodans ORS 571	Bartonella quintana str. Toulouse	* Bradyrhizobium japonicum USDA 110 Site: position = -37 score = 4.79014 sequence = TGCTGGTAGCGCTGTCAACG Gene: bll3916: Transcriptional regulator, LacI family	* Bradyrhizobium sp. BTAi1 Site: position = -58 score = 5.40426 sequence = ACGTGATAGCGCTGTCAATA Gene: BBta_3552: Transcriptional regulator, LacI family	Brucella melitensis 16M	Mesorhizobium loti MAFF303099 Gene: mll1683: Transcriptional regulator, LacI family	Mesorhizobium sp. BNC1	Nitrobacter winogradskyi Nb-255	* Rhizobium etli CFN 42 Site: position = -84 score = 5.14485 sequence = ATTTGCTAGCGCTATCAACT Site: position = -107 score = 4.84467 sequence = AGTTGACAGCGCAGTCAAAC Gene: RHE_CH01786: Transcriptional regulator, LacI family	* Rhizobium leguminosarum bv. viciae 3841 Site: position = -117 score = 5.15276 sequence = AGTTGACAGCGCTGTCAAAT Site: position = -94 score = 4.68399 sequence = ATCTGCTAGCGCTGTCAACT Gene: RL1995: Transcriptional regulator, LacI family	Rhizobium sp. NGR234	Rhodopseudomonas palustris CGA009	Sinorhizobium meliloti 1021	Xanthobacter autotrophicus Py2	Transcriptional regulator, LacI family

CRON 4.
blr3917	Agrobacterium tumefaciens str. C58 (Cereon)	Azorhizobium caulinodans ORS 571 Gene: AZC_4208: probable sugar ABC transporter, ATP-binding protein	Bartonella quintana str. Toulouse	* Bradyrhizobium japonicum USDA 110 Site: position = -162 score = 4.79014 sequence = CGTTGACAGCGCTACCAGCA Gene: blr3917: probable sugar ABC transporter, ATP-binding protein	* Bradyrhizobium sp. BTAi1 Site: position = -233 score = 5.40426 sequence = TATTGACAGCGCTATCACGT Gene: BBta_3553: probable sugar ABC transporter, ATP-binding protein	Brucella melitensis 16M	Mesorhizobium loti MAFF303099	Mesorhizobium sp. BNC1	Nitrobacter winogradskyi Nb-255	Rhizobium etli CFN 42 Gene: RHE_PF00090: probable sugar ABC transporter, ATP-binding protein	Rhizobium leguminosarum bv. viciae 3841 Gene: pRL120226: probable sugar ABC transporter, ATP-binding protein	Rhizobium sp. NGR234 Gene: NGR_b20260: probable sugar ABC transporter, ATP-binding protein	Rhodopseudomonas palustris CGA009 Gene: RPA3471: probable sugar ABC transporter, ATP-binding protein	Sinorhizobium meliloti 1021	Xanthobacter autotrophicus Py2 Gene: Xaut_0503: probable sugar ABC transporter, ATP-binding protein	probable sugar ABC transporter, ATP-binding protein
blr3918	Agrobacterium tumefaciens str. C58 (Cereon)	Azorhizobium caulinodans ORS 571 Gene: AZC_4209: ABC transporter substrate-binding protein	Bartonella quintana str. Toulouse	Bradyrhizobium japonicum USDA 110 Gene: blr3918: ABC transporter substrate-binding protein	Bradyrhizobium sp. BTAi1 Gene: BBta_3554: ABC transporter substrate-binding protein	Brucella melitensis 16M	Mesorhizobium loti MAFF303099	Mesorhizobium sp. BNC1	Nitrobacter winogradskyi Nb-255	Rhizobium etli CFN 42 Gene: RHE_PF00091: ABC transporter substrate-binding protein	Rhizobium leguminosarum bv. viciae 3841 Gene: pRL120225: ABC transporter substrate-binding protein	Rhizobium sp. NGR234 Gene: NGR_b20250: ABC transporter substrate-binding protein	Rhodopseudomonas palustris CGA009 Gene: RPA3470: ABC transporter substrate-binding protein	Sinorhizobium meliloti 1021	Xanthobacter autotrophicus Py2 Gene: Xaut_0502: ABC transporter substrate-binding protein	ABC transporter substrate-binding protein
blr3919	Agrobacterium tumefaciens str. C58 (Cereon)	Azorhizobium caulinodans ORS 571 Gene: AZC_4210: probable sugar ABC transporter, permease protein	Bartonella quintana str. Toulouse	Bradyrhizobium japonicum USDA 110 Gene: blr3919: probable sugar ABC transporter, permease protein	Bradyrhizobium sp. BTAi1 Gene: BBta_3555: probable sugar ABC transporter, permease protein	Brucella melitensis 16M	Mesorhizobium loti MAFF303099	Mesorhizobium sp. BNC1	Nitrobacter winogradskyi Nb-255	Rhizobium etli CFN 42 Gene: RHE_PF00092: probable sugar ABC transporter, permease protein	Rhizobium leguminosarum bv. viciae 3841 Gene: pRL120224: probable sugar ABC transporter, permease protein	Rhizobium sp. NGR234 Gene: NGR_b20240: probable sugar ABC transporter, permease protein	Rhodopseudomonas palustris CGA009 Gene: RPA3469: probable sugar ABC transporter, permease protein	Sinorhizobium meliloti 1021	Xanthobacter autotrophicus Py2 Gene: Xaut_0501: probable sugar ABC transporter, permease protein	probable sugar ABC transporter, permease protein
blr3920	Agrobacterium tumefaciens str. C58 (Cereon)	Azorhizobium caulinodans ORS 571 Gene: AZC_4211: putative sugar uptake ABC transporter permease protein	Bartonella quintana str. Toulouse	Bradyrhizobium japonicum USDA 110 Gene: blr3920: putative sugar uptake ABC transporter permease protein	Bradyrhizobium sp. BTAi1 Gene: BBta_3556: putative sugar uptake ABC transporter permease protein	Brucella melitensis 16M	Mesorhizobium loti MAFF303099	Mesorhizobium sp. BNC1	Nitrobacter winogradskyi Nb-255	Rhizobium etli CFN 42 Gene: RHE_PF00093: putative sugar uptake ABC transporter permease protein	Rhizobium leguminosarum bv. viciae 3841 Gene: pRL120223: putative sugar uptake ABC transporter permease protein	Rhizobium sp. NGR234 Gene: NGR_b20230: putative sugar uptake ABC transporter permease protein	Rhodopseudomonas palustris CGA009 Gene: RPA3468: putative sugar uptake ABC transporter permease protein	Sinorhizobium meliloti 1021	Xanthobacter autotrophicus Py2 Gene: Xaut_0500: putative sugar uptake ABC transporter permease protein	putative sugar uptake ABC transporter permease protein
blr3921	Agrobacterium tumefaciens str. C58 (Cereon)	Azorhizobium caulinodans ORS 571	Bartonella quintana str. Toulouse	Bradyrhizobium japonicum USDA 110 Gene: blr3921: NAD-dependent epimerase/dehydratase	Bradyrhizobium sp. BTAi1 Gene: BBta_3557: NAD-dependent epimerase/dehydratase	Brucella melitensis 16M	Mesorhizobium loti MAFF303099	Mesorhizobium sp. BNC1	Nitrobacter winogradskyi Nb-255	Rhizobium etli CFN 42 Gene: RHE_PF00088: NAD-dependent epimerase/dehydratase	Rhizobium leguminosarum bv. viciae 3841	Rhizobium sp. NGR234 Gene: NGR_b20280: NAD-dependent epimerase/dehydratase	Rhodopseudomonas palustris CGA009 Gene: RPA3467: NAD-dependent epimerase/dehydratase	Sinorhizobium meliloti 1021	Xanthobacter autotrophicus Py2	NAD-dependent epimerase/dehydratase

Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.

Red color - the gene is in non-regulated operon.

Gray color - the orthologous gene is absent.

The star symbol - the TFBS is located in upstream region of this gene.

The number - the numeber of homologs (shown only if it is greater than one).

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Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --

Regulog Mll1683 - Rhizobiales

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --