Statistics of regulated genes

Genome	Genes	Operons
Chloroflexus aggregans DSM 9485	2	2
Chloroflexus sp. Y-400-fl	4	2
Herpetosiphon aurantiacus ATCC 23779	5	2
Roseiflexus castenholzii DSM 13941	3	2
Roseiflexus sp. RS-1	2	2

Clusters of co-Regulated Orthologous operoNs (CRONs)

Genes						Function
CRON 1.
Caur_3587	* Chloroflexus aggregans DSM 9485 Site: position = -59 score = 6.54058 sequence = ATATTGACAATTGTCAATAT Gene: Cagg_0492: transcriptional regulator, ArsR family	* Chloroflexus sp. Y-400-fl Site: position = -60 score = 6.60038 sequence = ATATTGACAATCTTCAATAT Gene: Chy400_3868: transcriptional regulator, ArsR family	* Herpetosiphon aurantiacus ATCC 23779 Site: position = -50 score = 5.53072 sequence = ATATTGAATTAATTCGATAA Gene: Haur_0112: transcriptional regulator, ArsR family	* Roseiflexus castenholzii DSM 13941 Site: position = -52 score = 6.60038 sequence = ATATTGACAATCTTCAATAT Gene: Rcas_2310: transcriptional regulator, ArsR family	* Roseiflexus sp. RS-1 Site: position = -22 score = 6.46969 sequence = ATATTGACATTCTTCAATAT Gene: RoseRS_1223: transcriptional regulator, ArsR family	transcriptional regulator, ArsR family
PF0583	Chloroflexus aggregans DSM 9485 Gene: Cagg_0263: GCN5-related N-acetyltransferase (GNAT) domain	Chloroflexus sp. Y-400-fl Gene: Chy400_3609: GCN5-related N-acetyltransferase (GNAT) domain	Herpetosiphon aurantiacus ATCC 23779 Gene: Haur_0111: GCN5-related N-acetyltransferase (GNAT) domain	* Roseiflexus castenholzii DSM 13941 Site: position = -252 score = 5.57405 sequence = ATATCGATGATCATCAATAC Gene: Rcas_2311: GCN5-related N-acetyltransferase (GNAT) domain	Roseiflexus sp. RS-1	GCN5-related N-acetyltransferase (GNAT) domain
ubiE	Chloroflexus aggregans DSM 9485	Chloroflexus sp. Y-400-fl	Herpetosiphon aurantiacus ATCC 23779 Gene: Haur_0110: SAM-dependent methyltransferase DSY4148 (UbiE paralog)	Roseiflexus castenholzii DSM 13941 Gene: Rcas_2312: SAM-dependent methyltransferase DSY4148 (UbiE paralog)	* Roseiflexus sp. RS-1 Site: position = -71 score = 6.52318 sequence = ATATTGATGATCTTCAATAT Gene: RoseRS_1224: SAM-dependent methyltransferase DSY4148 (UbiE paralog)	SAM-dependent methyltransferase DSY4148 (UbiE paralog)
CRON 2.
PF07992	* Chloroflexus aggregans DSM 9485 Site: position = -89 score = 5.87957 sequence = TTATTGATGTATGTCAATAT Gene: Cagg_0491: FAD-dependent pyridine nucleotide-disulphide oxidoreductase	* Chloroflexus sp. Y-400-fl Site: position = -43 score = 6.00201 sequence = ATATCGATGATCTTCGATAT Gene: Chy400_3867: FAD-dependent pyridine nucleotide-disulphide oxidoreductase	* Herpetosiphon aurantiacus ATCC 23779 Site: position = -188 score = 5.86784 sequence = ATATTGATTTTTTTCAATCT Site: position = -41 score = 6.29615 sequence = ATATTGAAAATTTTCAATTT Gene: Haur_2824: FAD-dependent pyridine nucleotide-disulphide oxidoreductase	Roseiflexus castenholzii DSM 13941	Roseiflexus sp. RS-1	FAD-dependent pyridine nucleotide-disulphide oxidoreductase
MFS	Chloroflexus aggregans DSM 9485	Chloroflexus sp. Y-400-fl Gene: Chy400_3866: transporter, major facilitator superfamily (MFS)	Herpetosiphon aurantiacus ATCC 23779 Gene: Haur_2823: transporter, major facilitator superfamily (MFS)	Roseiflexus castenholzii DSM 13941	Roseiflexus sp. RS-1	transporter, major facilitator superfamily (MFS)
PF07992	Chloroflexus aggregans DSM 9485 Gene: Cagg_0199: FAD-dependent pyridine nucleotide-disulphide oxidoreductase	Chloroflexus sp. Y-400-fl Gene: Chy400_3865: FAD-dependent pyridine nucleotide-disulphide oxidoreductase	Herpetosiphon aurantiacus ATCC 23779 Gene: Haur_0689: FAD-dependent pyridine nucleotide-disulphide oxidoreductase	Roseiflexus castenholzii DSM 13941	Roseiflexus sp. RS-1	FAD-dependent pyridine nucleotide-disulphide oxidoreductase

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