Regulog Caur_3587 - Chloroflexia
| Regulator type: | Transcription factor |
| Regulator family: | ArsR |
| Regulation mode: | repressor |
| Biological process: | |
| Effector: | |
| Phylum: | Chloroflexi |
| Visualization: | |
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Allows to visualize regulog content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Chloroflexi
- By TF family - ArsR
| Genome | Genes | Operons |
|---|---|---|
| Chloroflexus aggregans DSM 9485 | 2 | 2 |
| Chloroflexus sp. Y-400-fl | 4 | 2 |
| Herpetosiphon aurantiacus ATCC 23779 | 5 | 2 |
| Roseiflexus castenholzii DSM 13941 | 3 | 2 |
| Roseiflexus sp. RS-1 | 2 | 2 |
| Genes | Function | |||||
|---|---|---|---|---|---|---|
| CRON 1. | ||||||
| Caur_3587 |
*
Chloroflexus aggregans DSM 9485 Site: position = -59 score = 6.54058 sequence = ATATTGACAATTGTCAATAT Gene: Cagg_0492: transcriptional regulator, ArsR family |
*
Chloroflexus sp. Y-400-fl Site: position = -60 score = 6.60038 sequence = ATATTGACAATCTTCAATAT Gene: Chy400_3868: transcriptional regulator, ArsR family |
*
Herpetosiphon aurantiacus ATCC 23779 Site: position = -50 score = 5.53072 sequence = ATATTGAATTAATTCGATAA Gene: Haur_0112: transcriptional regulator, ArsR family |
*
Roseiflexus castenholzii DSM 13941 Site: position = -52 score = 6.60038 sequence = ATATTGACAATCTTCAATAT Gene: Rcas_2310: transcriptional regulator, ArsR family |
*
Roseiflexus sp. RS-1 Site: position = -22 score = 6.46969 sequence = ATATTGACATTCTTCAATAT Gene: RoseRS_1223: transcriptional regulator, ArsR family |
transcriptional regulator, ArsR family |
| PF0583 |
Gene: Cagg_0263: GCN5-related N-acetyltransferase (GNAT) domain |
Gene: Chy400_3609: GCN5-related N-acetyltransferase (GNAT) domain |
Gene: Haur_0111: GCN5-related N-acetyltransferase (GNAT) domain |
*
Roseiflexus castenholzii DSM 13941 Site: position = -252 score = 5.57405 sequence = ATATCGATGATCATCAATAC Gene: Rcas_2311: GCN5-related N-acetyltransferase (GNAT) domain |
|
GCN5-related N-acetyltransferase (GNAT) domain |
| ubiE |
|
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Gene: Haur_0110: SAM-dependent methyltransferase DSY4148 (UbiE paralog) |
Gene: Rcas_2312: SAM-dependent methyltransferase DSY4148 (UbiE paralog) |
*
Roseiflexus sp. RS-1 Site: position = -71 score = 6.52318 sequence = ATATTGATGATCTTCAATAT Gene: RoseRS_1224: SAM-dependent methyltransferase DSY4148 (UbiE paralog) |
SAM-dependent methyltransferase DSY4148 (UbiE paralog) |
| CRON 2. | ||||||
| PF07992 |
*
Chloroflexus aggregans DSM 9485 Site: position = -89 score = 5.87957 sequence = TTATTGATGTATGTCAATAT Gene: Cagg_0491: FAD-dependent pyridine nucleotide-disulphide oxidoreductase |
*
Chloroflexus sp. Y-400-fl Site: position = -43 score = 6.00201 sequence = ATATCGATGATCTTCGATAT Gene: Chy400_3867: FAD-dependent pyridine nucleotide-disulphide oxidoreductase |
*
Herpetosiphon aurantiacus ATCC 23779 Site: position = -188 score = 5.86784 sequence = ATATTGATTTTTTTCAATCT Site: position = -41 score = 6.29615 sequence = ATATTGAAAATTTTCAATTT Gene: Haur_2824: FAD-dependent pyridine nucleotide-disulphide oxidoreductase |
|
|
FAD-dependent pyridine nucleotide-disulphide oxidoreductase |
| MFS |
|
Gene: Chy400_3866: transporter, major facilitator superfamily (MFS) |
Gene: Haur_2823: transporter, major facilitator superfamily (MFS) |
|
|
transporter, major facilitator superfamily (MFS) |
| PF07992 |
Gene: Cagg_0199: FAD-dependent pyridine nucleotide-disulphide oxidoreductase |
Gene: Chy400_3865: FAD-dependent pyridine nucleotide-disulphide oxidoreductase |
Gene: Haur_0689: FAD-dependent pyridine nucleotide-disulphide oxidoreductase |
|
|
FAD-dependent pyridine nucleotide-disulphide oxidoreductase |
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |