Regulog CelR - Vibrionales

Properties
Regulator type:	Transcription factor
Regulator family:	LacI
Regulation mode:	repressor
Biological process:	Cellobiose utilization
Effector:	Cellobiose-6-phosphate
Phylum:	Proteobacteria/gamma
Visualization:
	Allows to visualize regulog content in the context of metabolic pathways

Built upon 10 sites [see more]

Member of regulog collections

By taxonomy - Vibrionales
By TF family - LacI
By effector - Cellobiose-6-phosphate
By pathway - Cellobiose utilization

Statistics of regulated genes
Genome	Genes	Operons
Photobacterium profundum SS9	7	2
Vibrio angustum S14
Vibrio cholerae O1 biovar eltor str. N16961	7	2
Vibrio fischeri ES114
Vibrio harveyi ATCC BAA-1116	7	2
Vibrio parahaemolyticus RIMD 2210633	7	2
Vibrio salmonicida LFI1238
Vibrio shilonii AK1
Vibrio splendidus LGP32
Vibrio vulnificus CMCP6	7	2

Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes											Function

CRON 1.
celG	* Photobacterium profundum SS9 Site: position = -286 score = 6.40943 sequence = AAGCGCAACCGGTTGCGCGA Gene: PBPRA0494: oligosaccharide deacetylase	Vibrio angustum S14	* Vibrio cholerae O1 biovar eltor str. N16961 Site: position = -179 score = 6.84134 sequence = AAGCGCAACCGGTTGCGTTA Gene: VC1280: oligosaccharide deacetylase	Vibrio fischeri ES114	* Vibrio harveyi ATCC BAA-1116 Site: position = -184 score = 6.64276 sequence = AAGCGCAACCGGTTGCATTG Gene: VIBHAR_03626: oligosaccharide deacetylase	* Vibrio parahaemolyticus RIMD 2210633 Site: position = -183 score = 6.95307 sequence = AAGCGCAACCGGTTGCGCTA Gene: VP2638: oligosaccharide deacetylase	Vibrio salmonicida LFI1238	Vibrio shilonii AK1	Vibrio splendidus LGP32	* Vibrio vulnificus CMCP6 Site: position = -206 score = 6.64276 sequence = AAGCGCAACCGGTTGCATTG Gene: VV1_1481: oligosaccharide deacetylase	oligosaccharide deacetylase

CRON 2.
celB	* Photobacterium profundum SS9 Site: position = -150 score = 6.73565 sequence = TCGCGCAACCGGTTGCGCTT Gene: PBPRA0495: PTS system, cellobiose-specific IIB component (EC 2.7.1.69)	Vibrio angustum S14	* Vibrio cholerae O1 biovar eltor str. N16961 Site: position = -83 score = 6.93866 sequence = TAACGCAACCGGTTGCGCTT Gene: VC1281: PTS system, cellobiose-specific IIB component (EC 2.7.1.69)	Vibrio fischeri ES114	* Vibrio harveyi ATCC BAA-1116 Site: position = -84 score = 6.67895 sequence = CAATGCAACCGGTTGCGCTT Gene: VIBHAR_03625: PTS system, cellobiose-specific IIB component (EC 2.7.1.69)	* Vibrio parahaemolyticus RIMD 2210633 Site: position = -84 score = 7.05039 sequence = TAGCGCAACCGGTTGCGCTT Gene: VP2637: PTS system, cellobiose-specific IIB component (EC 2.7.1.69)	Vibrio salmonicida LFI1238	Vibrio shilonii AK1	Vibrio splendidus LGP32	* Vibrio vulnificus CMCP6 Site: position = -127 score = 6.67895 sequence = CAATGCAACCGGTTGCGCTT Gene: VV1_1482: PTS system, cellobiose-specific IIB component (EC 2.7.1.69)	PTS system, cellobiose-specific IIB component (EC 2.7.1.69)
celD	Photobacterium profundum SS9 Gene: PBPRA0496: PTS system, cellobiose-specific IIC component (EC 2.7.1.69)	Vibrio angustum S14	Vibrio cholerae O1 biovar eltor str. N16961 Gene: VC1282: PTS system, cellobiose-specific IIC component (EC 2.7.1.69)	Vibrio fischeri ES114	Vibrio harveyi ATCC BAA-1116 Gene: VIBHAR_03624: PTS system, cellobiose-specific IIC component (EC 2.7.1.69)	Vibrio parahaemolyticus RIMD 2210633 Gene: VP2636: PTS system, cellobiose-specific IIC component (EC 2.7.1.69)	Vibrio salmonicida LFI1238	Vibrio shilonii AK1	Vibrio splendidus LGP32	Vibrio vulnificus CMCP6 Gene: VV1_1483: PTS system, cellobiose-specific IIC component (EC 2.7.1.69)	PTS system, cellobiose-specific IIC component (EC 2.7.1.69)
celA	Photobacterium profundum SS9	Vibrio angustum S14	Vibrio cholerae O1 biovar eltor str. N16961 Gene: VC1283: PTS system, cellobiose-specific IIA component (EC 2.7.1.69)	Vibrio fischeri ES114	Vibrio harveyi ATCC BAA-1116 Gene: VIBHAR_03623: PTS system, cellobiose-specific IIA component (EC 2.7.1.69)	Vibrio parahaemolyticus RIMD 2210633 Gene: VP2635: PTS system, cellobiose-specific IIA component (EC 2.7.1.69)	Vibrio salmonicida LFI1238	Vibrio shilonii AK1	Vibrio splendidus LGP32	Vibrio vulnificus CMCP6 Gene: VV1_1484: PTS system, cellobiose-specific IIA component (EC 2.7.1.69)	PTS system, cellobiose-specific IIA component (EC 2.7.1.69)
bglA	Photobacterium profundum SS9 Gene: PBPRA0497: 6-phospho-beta-glucosidase (EC 3.2.1.86)	Vibrio angustum S14	Vibrio cholerae O1 biovar eltor str. N16961 Gene: VC1284: 6-phospho-beta-glucosidase (EC 3.2.1.86)	Vibrio fischeri ES114	Vibrio harveyi ATCC BAA-1116 Gene: VIBHAR_03622: 6-phospho-beta-glucosidase (EC 3.2.1.86)	Vibrio parahaemolyticus RIMD 2210633 Gene: VP2634: 6-phospho-beta-glucosidase (EC 3.2.1.86)	Vibrio salmonicida LFI1238	Vibrio shilonii AK1	Vibrio splendidus LGP32	Vibrio vulnificus CMCP6 Gene: VV1_1485: 6-phospho-beta-glucosidase (EC 3.2.1.86)	6-phospho-beta-glucosidase (EC 3.2.1.86)
celE	Photobacterium profundum SS9 Gene: PBPRA0498: Cellobiose phosphotransferase system YdjC-like protein	Vibrio angustum S14	Vibrio cholerae O1 biovar eltor str. N16961 Gene: VC1285: Cellobiose phosphotransferase system YdjC-like protein	Vibrio fischeri ES114	Vibrio harveyi ATCC BAA-1116 Gene: VIBHAR_03621: Cellobiose phosphotransferase system YdjC-like protein	Vibrio parahaemolyticus RIMD 2210633 Gene: VP2633: Cellobiose phosphotransferase system YdjC-like protein	Vibrio salmonicida LFI1238	Vibrio shilonii AK1	Vibrio splendidus LGP32	Vibrio vulnificus CMCP6 Gene: VV1_1486: Cellobiose phosphotransferase system YdjC-like protein	Cellobiose phosphotransferase system YdjC-like protein
celR	2 Photobacterium profundum SS9 Gene: PBPRA0499: Transcriptional regulator for cellobiose utilization, LacI family Gene: PBPRA0500: Transcriptional regulator for cellobiose utilization, LacI family	Vibrio angustum S14	Vibrio cholerae O1 biovar eltor str. N16961 Gene: VC1286: Transcriptional regulator for cellobiose utilization, LacI family	Vibrio fischeri ES114	Vibrio harveyi ATCC BAA-1116 Gene: VIBHAR_03620: Transcriptional regulator for cellobiose utilization, LacI family	Vibrio parahaemolyticus RIMD 2210633 Gene: VP2632: Transcriptional regulator for cellobiose utilization, LacI family	Vibrio salmonicida LFI1238	Vibrio shilonii AK1	Vibrio splendidus LGP32	Vibrio vulnificus CMCP6 Gene: VV1_1487: Transcriptional regulator for cellobiose utilization, LacI family	Transcriptional regulator for cellobiose utilization, LacI family

Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.

Red color - the gene is in non-regulated operon.

Gray color - the orthologous gene is absent.

The star symbol - the TFBS is located in upstream region of this gene.

The number - the numeber of homologs (shown only if it is greater than one).

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Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --

Regulog CelR - Vibrionales

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --