Regulog MerR - Ralstonia
| Regulator type: | Transcription factor |
| Regulator family: | MerR |
| Regulation mode: | activator |
| Biological process: | Mercury resistance |
| Effector: | Mercury ion, (Hg2+) |
| Phylum: | Proteobacteria/Beta |
| Visualization: | |
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Allows to visualize regulog content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Ralstonia
- By trascription factor - MerR
- By TF family - MerR
- By effector - Mercury ion, (Hg2+)
- By pathway - Mercury resistance
| Genome | Genes | Operons |
|---|---|---|
| Ralstonia solanacearum GMI1000 | ||
| Ralstonia pickettii 12J | 6 | 1 |
| Ralstonia metallidurans CH34 | 25 | 7 |
| Ralstonia eutropha JMP134 | 10 | 2 |
| Ralstonia eutropha H16 | 2 | 1 |
| Cupriavidus taiwanensis |
| Genes | Function | ||||||
|---|---|---|---|---|---|---|---|
| CRON 1. | |||||||
| h16_B0904 |
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*
Ralstonia eutropha H16 Site: position = -142 score = 6.26364 sequence = ACTCCGTACCTTGGTACGGACC Gene: H16_B0904: hypothetical protein |
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hypothetical protein |
| h16_B0905 |
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Gene: H16_B0905: hypothetical protein |
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hypothetical protein |
| CRON 2. | |||||||
| merT |
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*
Ralstonia pickettii 12J Site: position = -63 score = 6.06052 sequence = ACTCCGTACAACAGTACGGAAG Gene: Rpic_1784: Mercury uptake inner membane protein |
*4
Ralstonia metallidurans CH34 Site: position = -63 score = 6.32826 sequence = ACTCCGTACATGAGTACGGAAG Gene: Rmet_6172: Mercury uptake inner membane protein Site: position = -63 score = 6.32826 sequence = ACTCCGTACATGAGTACGGAAG Gene: Rmet_6345: Mercury uptake inner membane protein Site: position = -63 score = 6.32826 sequence = ACTCCGTACATGAGTACGGAAG Gene: pMOL30_107: Mercury uptake inner membane protein Site: position = -63 score = 6.32826 sequence = ACTCCGTACATGAGTACGGAAG Gene: RMe0107: Mercury uptake inner membane protein |
*2
Ralstonia eutropha JMP134 Site: position = -63 score = 6.32826 sequence = ACTCCGTACATGAGTACGGAAG Gene: Reut_D6497: Mercury uptake inner membane protein Site: position = -63 score = 6.32826 sequence = ACTCCGTACATGAGTACGGAAG Gene: pJP4_52: Mercury uptake inner membane protein |
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Mercury uptake inner membane protein |
| merP |
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Gene: Rpic_1785: Periplasmic mercury (+2) binding protein |
4
Ralstonia metallidurans CH34 Gene: Rmet_6173: Periplasmic mercury (+2) binding protein Gene: Rmet_6346: Periplasmic mercury (+2) binding protein Gene: pMOL30_106: Periplasmic mercury (+2) binding protein Gene: RMe0106: Periplasmic mercury (+2) binding protein |
2
Ralstonia eutropha JMP134 Gene: Reut_D6496: Periplasmic mercury (+2) binding protein Gene: pJP4_51: Periplasmic mercury (+2) binding protein |
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Periplasmic mercury (+2) binding protein |
| merC |
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Gene: Rpic_1786: Mercury uptake inner membane protein |
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Mercury uptake inner membane protein |
| merA |
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Gene: Rpic_1787: Mercuric ion reductase (EC 1.16.1.1) |
4
Ralstonia metallidurans CH34 Gene: Rmet_6183: Mercuric ion reductase (EC 1.16.1.1) Gene: Rmet_6174: Mercuric ion reductase (EC 1.16.1.1) Gene: pMOL30_105: Mercuric ion reductase (EC 1.16.1.1) Gene: RMe0105: Mercuric ion reductase (EC 1.16.1.1) |
2
Ralstonia eutropha JMP134 Gene: Reut_D6495: Mercuric ion reductase (EC 1.16.1.1) Gene: pJP4_50: Mercuric ion reductase (EC 1.16.1.1) |
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Mercuric ion reductase (EC 1.16.1.1) |
| merD |
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Gene: Rpic_1788: Mercuric resistance operon coregulator |
4
Ralstonia metallidurans CH34 Gene: Rmet_6175: Mercuric resistance operon coregulator Gene: Rmet_6184: Mercuric resistance operon coregulator Gene: pMOL30_104: Mercuric resistance operon coregulator Gene: RMe0104: Mercuric resistance operon coregulator |
2
Ralstonia eutropha JMP134 Gene: Reut_D6494: Mercuric resistance operon coregulator Gene: pJP4_49: Mercuric resistance operon coregulator |
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Mercuric resistance operon coregulator |
| merB |
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Gene: Rpic_1789: Organomercurial lyase |
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Organomercurial lyase |
| merE |
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4
Ralstonia metallidurans CH34 Gene: Rmet_6176: Putative mercury resistance protein Gene: Rmet_6185: Putative mercury resistance protein Gene: pMOL30_103: Putative mercury resistance protein Gene: RMe0103: Putative mercury resistance protein |
2
Ralstonia eutropha JMP134 Gene: pJP4_48: Putative mercury resistance protein Gene: Reut_D6493: Putative mercury resistance protein |
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Putative mercury resistance protein |
| CRON 3. | |||||||
| merT |
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*3
Ralstonia metallidurans CH34 Site: position = -62 score = 6.32283 sequence = ACTCCGTACTCAGGTACGGGAT Gene: Rmet_5991: Mercuric transport protein, MerT Site: position = -63 score = 6.17332 sequence = ACTCCGTAGTTGACTACGGAAG Gene: Rmet_2313: Mercuric transport protein, MerT Site: position = -62 score = 6.32283 sequence = ACTCCGTACTCAGGTACGGGAT Gene: pMOL30_053: Mercuric transport protein, MerT |
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Mercuric transport protein, MerT |
| merP |
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2
Ralstonia metallidurans CH34 Gene: pMOL30_052: Periplasmic mercury (+2) binding protein Gene: Rmet_2314: Periplasmic mercury (+2) binding protein |
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Periplasmic mercury (+2) binding protein |
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |