Regulog MerR - Ralstonia

Properties
Regulator type:	Transcription factor
Regulator family:	MerR
Regulation mode:	activator
Biological process:	Mercury resistance
Effector:	Mercury ion, (Hg2+)
Phylum:	Proteobacteria/Beta
Visualization:
	Allows to visualize regulog content in the context of metabolic pathways

Built upon 11 sites [see more]

Member of regulog collections

By taxonomy - Ralstonia
By trascription factor - MerR
By TF family - MerR
By effector - Mercury ion, (Hg2+)
By pathway - Mercury resistance

Statistics of regulated genes
Genome	Genes	Operons
Ralstonia solanacearum GMI1000
Ralstonia pickettii 12J	6	1
Ralstonia metallidurans CH34	25	7
Ralstonia eutropha JMP134	10	2
Ralstonia eutropha H16	2	1
Cupriavidus taiwanensis

Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes							Function

CRON 1.
h16_B0904	Ralstonia solanacearum GMI1000	Ralstonia pickettii 12J	Ralstonia metallidurans CH34	Ralstonia eutropha JMP134	* Ralstonia eutropha H16 Site: position = -142 score = 6.26364 sequence = ACTCCGTACCTTGGTACGGACC Gene: H16_B0904: hypothetical protein	Cupriavidus taiwanensis	hypothetical protein
h16_B0905	Ralstonia solanacearum GMI1000	Ralstonia pickettii 12J	Ralstonia metallidurans CH34	Ralstonia eutropha JMP134	Ralstonia eutropha H16 Gene: H16_B0905: hypothetical protein	Cupriavidus taiwanensis	hypothetical protein

CRON 2.
merT	Ralstonia solanacearum GMI1000	* Ralstonia pickettii 12J Site: position = -63 score = 6.06052 sequence = ACTCCGTACAACAGTACGGAAG Gene: Rpic_1784: Mercury uptake inner membane protein	4 Ralstonia metallidurans CH34* Site: position = -63 score = 6.32826 sequence = ACTCCGTACATGAGTACGGAAG Gene: Rmet_6172: Mercury uptake inner membane protein Site: position = -63 score = 6.32826 sequence = ACTCCGTACATGAGTACGGAAG Gene: Rmet_6345: Mercury uptake inner membane protein Site: position = -63 score = 6.32826 sequence = ACTCCGTACATGAGTACGGAAG Gene: pMOL30_107: Mercury uptake inner membane protein Site: position = -63 score = 6.32826 sequence = ACTCCGTACATGAGTACGGAAG Gene: RMe0107: Mercury uptake inner membane protein	2 Ralstonia eutropha JMP134* Site: position = -63 score = 6.32826 sequence = ACTCCGTACATGAGTACGGAAG Gene: Reut_D6497: Mercury uptake inner membane protein Site: position = -63 score = 6.32826 sequence = ACTCCGTACATGAGTACGGAAG Gene: pJP4_52: Mercury uptake inner membane protein	Ralstonia eutropha H16	Cupriavidus taiwanensis	Mercury uptake inner membane protein
merP	Ralstonia solanacearum GMI1000	Ralstonia pickettii 12J Gene: Rpic_1785: Periplasmic mercury (+2) binding protein	4 Ralstonia metallidurans CH34 Gene: Rmet_6173: Periplasmic mercury (+2) binding protein Gene: Rmet_6346: Periplasmic mercury (+2) binding protein Gene: pMOL30_106: Periplasmic mercury (+2) binding protein Gene: RMe0106: Periplasmic mercury (+2) binding protein	2 Ralstonia eutropha JMP134 Gene: Reut_D6496: Periplasmic mercury (+2) binding protein Gene: pJP4_51: Periplasmic mercury (+2) binding protein	Ralstonia eutropha H16	Cupriavidus taiwanensis	Periplasmic mercury (+2) binding protein
merC	Ralstonia solanacearum GMI1000	Ralstonia pickettii 12J Gene: Rpic_1786: Mercury uptake inner membane protein	Ralstonia metallidurans CH34	Ralstonia eutropha JMP134	Ralstonia eutropha H16	Cupriavidus taiwanensis	Mercury uptake inner membane protein
merA	Ralstonia solanacearum GMI1000	Ralstonia pickettii 12J Gene: Rpic_1787: Mercuric ion reductase (EC 1.16.1.1)	4 Ralstonia metallidurans CH34 Gene: Rmet_6183: Mercuric ion reductase (EC 1.16.1.1) Gene: Rmet_6174: Mercuric ion reductase (EC 1.16.1.1) Gene: pMOL30_105: Mercuric ion reductase (EC 1.16.1.1) Gene: RMe0105: Mercuric ion reductase (EC 1.16.1.1)	2 Ralstonia eutropha JMP134 Gene: Reut_D6495: Mercuric ion reductase (EC 1.16.1.1) Gene: pJP4_50: Mercuric ion reductase (EC 1.16.1.1)	Ralstonia eutropha H16	Cupriavidus taiwanensis	Mercuric ion reductase (EC 1.16.1.1)
merD	Ralstonia solanacearum GMI1000	Ralstonia pickettii 12J Gene: Rpic_1788: Mercuric resistance operon coregulator	4 Ralstonia metallidurans CH34 Gene: Rmet_6175: Mercuric resistance operon coregulator Gene: Rmet_6184: Mercuric resistance operon coregulator Gene: pMOL30_104: Mercuric resistance operon coregulator Gene: RMe0104: Mercuric resistance operon coregulator	2 Ralstonia eutropha JMP134 Gene: Reut_D6494: Mercuric resistance operon coregulator Gene: pJP4_49: Mercuric resistance operon coregulator	Ralstonia eutropha H16	Cupriavidus taiwanensis	Mercuric resistance operon coregulator
merB	Ralstonia solanacearum GMI1000	Ralstonia pickettii 12J Gene: Rpic_1789: Organomercurial lyase	Ralstonia metallidurans CH34	Ralstonia eutropha JMP134	Ralstonia eutropha H16	Cupriavidus taiwanensis	Organomercurial lyase
merE	Ralstonia solanacearum GMI1000	Ralstonia pickettii 12J	4 Ralstonia metallidurans CH34 Gene: Rmet_6176: Putative mercury resistance protein Gene: Rmet_6185: Putative mercury resistance protein Gene: pMOL30_103: Putative mercury resistance protein Gene: RMe0103: Putative mercury resistance protein	2 Ralstonia eutropha JMP134 Gene: pJP4_48: Putative mercury resistance protein Gene: Reut_D6493: Putative mercury resistance protein	Ralstonia eutropha H16	Cupriavidus taiwanensis	Putative mercury resistance protein

CRON 3.
merT	Ralstonia solanacearum GMI1000	Ralstonia pickettii 12J	3 Ralstonia metallidurans CH34* Site: position = -62 score = 6.32283 sequence = ACTCCGTACTCAGGTACGGGAT Gene: Rmet_5991: Mercuric transport protein, MerT Site: position = -63 score = 6.17332 sequence = ACTCCGTAGTTGACTACGGAAG Gene: Rmet_2313: Mercuric transport protein, MerT Site: position = -62 score = 6.32283 sequence = ACTCCGTACTCAGGTACGGGAT Gene: pMOL30_053: Mercuric transport protein, MerT	Ralstonia eutropha JMP134	Ralstonia eutropha H16	Cupriavidus taiwanensis	Mercuric transport protein, MerT
merP	Ralstonia solanacearum GMI1000	Ralstonia pickettii 12J	2 Ralstonia metallidurans CH34 Gene: pMOL30_052: Periplasmic mercury (+2) binding protein Gene: Rmet_2314: Periplasmic mercury (+2) binding protein	Ralstonia eutropha JMP134	Ralstonia eutropha H16	Cupriavidus taiwanensis	Periplasmic mercury (+2) binding protein

Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.

Red color - the gene is in non-regulated operon.

Gray color - the orthologous gene is absent.

The star symbol - the TFBS is located in upstream region of this gene.

The number - the numeber of homologs (shown only if it is greater than one).

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	Regulatory Sites	[ FASTA format ]	DOWNLOAD

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --

Regulog MerR - Ralstonia

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --