Regulog LsrR - Enterobacteriales

Properties
Regulator type:	Transcription factor
Regulator family:	SorC
Regulation mode:	repressor
Biological process:	Quorum sensing; Biofilm formation
Effector:	4,5-dihydroxypentan-2,3-dione
Phylum:	Proteobacteria
Visualization:
	Allows to visualize regulog content in the context of metabolic pathways

Built upon 19 sites [see more]

Member of regulog collections

By taxonomy - Enterobacteriales
By TF family - SorC
By effector - 4,5-dihydroxypentan-2,3-dione
By pathway - Quorum sensing
By pathway - Biofilm formation

Statistics of regulated genes
Genome	Genes	Operons
Citrobacter koseri ATCC BAA-895
Edwardsiella tarda EIB202
Enterobacter sp. 638	8	2
Erwinia amylovora ATCC 49946
Erwinia carotovora subsp. atroseptica SCRI1043
Escherichia coli str. K-12 substr. MG1655	8	2
Klebsiella pneumoniae subsp. pneumoniae MGH 78578	8	2
Photorhabdus luminescens subsp. laumondii TTO1	8	2
Proteus mirabilis HI4320
Salmonella typhimurium LT2	8	2
Serratia proteamaculans 568
Yersinia pestis KIM	6	1

Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes													Function

CRON 1.
lsrR	Citrobacter koseri ATCC BAA-895	Edwardsiella tarda EIB202	* Enterobacter sp. 638 Site: position = -35 score = 6.01979 sequence = GAACATATGATCTAAATTTTTATAAGAGTTC Site: position = -201 score = 6.63222 sequence = GAACAAATGATTTTTTGATTTAATAATGTTC Gene: Ent638_3537: Quorum sensing transcriptional repgulator of LsrR, SorC family	Erwinia amylovora ATCC 49946	Erwinia carotovora subsp. atroseptica SCRI1043	* Escherichia coli str. K-12 substr. MG1655 Site: position = -48 score = 6.67963 sequence = GAACAATTGCATTAAAGATTTAAATATGTTC Site: position = -216 score = 6.5782 sequence = GAACAAATGTATTTCTGCTTTTAATTTGTTC Gene: b1512: Quorum sensing transcriptional repgulator of LsrR, SorC family	* Klebsiella pneumoniae subsp. pneumoniae MGH 78578 Site: position = -36 score = 6.01979 sequence = GAACATATGATCTAAATTTTTATAAGAGTTC Site: position = -203 score = 6.6899 sequence = GAACAAATGATTTTTAAATTTAATAATGTTC Gene: KPN_03508: Quorum sensing transcriptional repgulator of LsrR, SorC family	* Photorhabdus luminescens subsp. laumondii TTO1 Site: position = -184 score = 6.77146 sequence = GAACATTTATCTATTTAAAAAACAATTGTTC Gene: plu3142: Quorum sensing transcriptional repgulator of LsrR, SorC family	Proteus mirabilis HI4320	* Salmonella typhimurium LT2 Site: position = -219 score = 6.62558 sequence = GAACAAATGTTTTTTGAAAAAGAAATTGTTC Site: position = -53 score = 6.47538 sequence = GAACAATTGTGTTAATGATTTAGAAATGTTC Gene: STM4073: Quorum sensing transcriptional repgulator of LsrR, SorC family	Serratia proteamaculans 568	2 Yersinia pestis KIM Gene: y3766: Quorum sensing transcriptional repgulator of LsrR, SorC family Gene: y3765: Quorum sensing transcriptional repgulator of LsrR, SorC family	Quorum sensing transcriptional repgulator of LsrR, SorC family
lsrK	Citrobacter koseri ATCC BAA-895	Edwardsiella tarda EIB202	Enterobacter sp. 638 Gene: Ent638_3538: Autoinducer 2 (AI-2) kinase LsrK (EC 2.7.1.-)	Erwinia amylovora ATCC 49946	Erwinia carotovora subsp. atroseptica SCRI1043	Escherichia coli str. K-12 substr. MG1655 Gene: b1511: Autoinducer 2 (AI-2) kinase LsrK (EC 2.7.1.-)	Klebsiella pneumoniae subsp. pneumoniae MGH 78578 Gene: KPN_03509: Autoinducer 2 (AI-2) kinase LsrK (EC 2.7.1.-)	Photorhabdus luminescens subsp. laumondii TTO1 Gene: plu3141: Autoinducer 2 (AI-2) kinase LsrK (EC 2.7.1.-)	Proteus mirabilis HI4320	Salmonella typhimurium LT2 Gene: STM4072: Autoinducer 2 (AI-2) kinase LsrK (EC 2.7.1.-)	Serratia proteamaculans 568	Yersinia pestis KIM Gene: y3764: Autoinducer 2 (AI-2) kinase LsrK (EC 2.7.1.-)	Autoinducer 2 (AI-2) kinase LsrK (EC 2.7.1.-)

CRON 2.
lsrA	Citrobacter koseri ATCC BAA-895	Edwardsiella tarda EIB202	* Enterobacter sp. 638 Site: position = -46 score = 6.63222 sequence = GAACATTATTAAATCAAAAAATCATTTGTTC Site: position = -212 score = 6.01979 sequence = GAACTCTTATAAAAATTTAGATCATATGTTC Gene: Ent638_3536: Autoinducer 2 (AI-2) ABC transport system, fused AI2 transporter subunits and ATP-binding component	Erwinia amylovora ATCC 49946	Erwinia carotovora subsp. atroseptica SCRI1043	* Escherichia coli str. K-12 substr. MG1655 Site: position = -63 score = 6.5782 sequence = GAACAAATTAAAAGCAGAAATACATTTGTTC Site: position = -231 score = 6.67963 sequence = GAACATATTTAAATCTTTAATGCAATTGTTC Gene: b1513: Autoinducer 2 (AI-2) ABC transport system, fused AI2 transporter subunits and ATP-binding component	* Klebsiella pneumoniae subsp. pneumoniae MGH 78578 Site: position = -210 score = 6.01979 sequence = GAACTCTTATAAAAATTTAGATCATATGTTC Site: position = -43 score = 6.6899 sequence = GAACATTATTAAATTTAAAAATCATTTGTTC Gene: KPN_03507: Autoinducer 2 (AI-2) ABC transport system, fused AI2 transporter subunits and ATP-binding component	* Photorhabdus luminescens subsp. laumondii TTO1 Site: position = -72 score = 6.77146 sequence = GAACAATTGTTTTTTAAATAGATAAATGTTC Gene: plu3143: Autoinducer 2 (AI-2) ABC transport system, fused AI2 transporter subunits and ATP-binding component	Proteus mirabilis HI4320	* Salmonella typhimurium LT2 Site: position = -233 score = 6.47538 sequence = GAACATTTCTAAATCATTAACACAATTGTTC Site: position = -67 score = 6.62558 sequence = GAACAATTTCTTTTTCAAAAAACATTTGTTC Gene: STM4074: Autoinducer 2 (AI-2) ABC transport system, fused AI2 transporter subunits and ATP-binding component	Serratia proteamaculans 568	* Yersinia pestis KIM Site: position = 2 score = 6.60668 sequence = GAACACTTTTAAATTAAAAATATTTTTGTTC Gene: y3769: Autoinducer 2 (AI-2) ABC transport system, fused AI2 transporter subunits and ATP-binding component	Autoinducer 2 (AI-2) ABC transport system, fused AI2 transporter subunits and ATP-binding component
lsrC	Citrobacter koseri ATCC BAA-895	Edwardsiella tarda EIB202	Enterobacter sp. 638 Gene: Ent638_3535: Autoinducer 2 (AI-2) ABC transport system, membrane channel protein LsrC	Erwinia amylovora ATCC 49946	Erwinia carotovora subsp. atroseptica SCRI1043	Escherichia coli str. K-12 substr. MG1655 Gene: b1514: Autoinducer 2 (AI-2) ABC transport system, membrane channel protein LsrC	Klebsiella pneumoniae subsp. pneumoniae MGH 78578 Gene: KPN_03506: Autoinducer 2 (AI-2) ABC transport system, membrane channel protein LsrC	Photorhabdus luminescens subsp. laumondii TTO1 Gene: plu3144: Autoinducer 2 (AI-2) ABC transport system, membrane channel protein LsrC	Proteus mirabilis HI4320	Salmonella typhimurium LT2 Gene: STM4075: Autoinducer 2 (AI-2) ABC transport system, membrane channel protein LsrC	Serratia proteamaculans 568	Yersinia pestis KIM Gene: y3770: Autoinducer 2 (AI-2) ABC transport system, membrane channel protein LsrC	Autoinducer 2 (AI-2) ABC transport system, membrane channel protein LsrC
lsrD	Citrobacter koseri ATCC BAA-895	Edwardsiella tarda EIB202	Enterobacter sp. 638 Gene: Ent638_3534: Autoinducer 2 (AI-2) ABC transport system, membrane channel protein LsrD	Erwinia amylovora ATCC 49946	Erwinia carotovora subsp. atroseptica SCRI1043	Escherichia coli str. K-12 substr. MG1655 Gene: b1515: Autoinducer 2 (AI-2) ABC transport system, membrane channel protein LsrD	Klebsiella pneumoniae subsp. pneumoniae MGH 78578 Gene: KPN_03505: Autoinducer 2 (AI-2) ABC transport system, membrane channel protein LsrD	Photorhabdus luminescens subsp. laumondii TTO1 Gene: plu3145: Autoinducer 2 (AI-2) ABC transport system, membrane channel protein LsrD	Proteus mirabilis HI4320	Salmonella typhimurium LT2 Gene: STM4076: Autoinducer 2 (AI-2) ABC transport system, membrane channel protein LsrD	Serratia proteamaculans 568	Yersinia pestis KIM Gene: y3771: Autoinducer 2 (AI-2) ABC transport system, membrane channel protein LsrD	Autoinducer 2 (AI-2) ABC transport system, membrane channel protein LsrD
lsrB	Citrobacter koseri ATCC BAA-895	Edwardsiella tarda EIB202	Enterobacter sp. 638 Gene: Ent638_3533: Autoinducer 2 (AI-2) ABC transport system, periplasmic AI-2 binding protein LsrB	Erwinia amylovora ATCC 49946	Erwinia carotovora subsp. atroseptica SCRI1043	Escherichia coli str. K-12 substr. MG1655 Gene: b1516: Autoinducer 2 (AI-2) ABC transport system, periplasmic AI-2 binding protein LsrB	Klebsiella pneumoniae subsp. pneumoniae MGH 78578 Gene: KPN_03504: Autoinducer 2 (AI-2) ABC transport system, periplasmic AI-2 binding protein LsrB	Photorhabdus luminescens subsp. laumondii TTO1 Gene: plu3146: Autoinducer 2 (AI-2) ABC transport system, periplasmic AI-2 binding protein LsrB	Proteus mirabilis HI4320	Salmonella typhimurium LT2 Gene: STM4077: Autoinducer 2 (AI-2) ABC transport system, periplasmic AI-2 binding protein LsrB	Serratia proteamaculans 568	Yersinia pestis KIM Gene: y3772: Autoinducer 2 (AI-2) ABC transport system, periplasmic AI-2 binding protein LsrB	Autoinducer 2 (AI-2) ABC transport system, periplasmic AI-2 binding protein LsrB
lsrF	Citrobacter koseri ATCC BAA-895	Edwardsiella tarda EIB202	Enterobacter sp. 638 Gene: Ent638_3532: Autoinducer 2 (AI-2) aldolase LsrF (EC 4.2.1.-)	Erwinia amylovora ATCC 49946	Erwinia carotovora subsp. atroseptica SCRI1043	Escherichia coli str. K-12 substr. MG1655 Gene: b1517: Autoinducer 2 (AI-2) aldolase LsrF (EC 4.2.1.-)	Klebsiella pneumoniae subsp. pneumoniae MGH 78578 Gene: KPN_03503: Autoinducer 2 (AI-2) aldolase LsrF (EC 4.2.1.-)	Photorhabdus luminescens subsp. laumondii TTO1 Gene: plu3147: Autoinducer 2 (AI-2) aldolase LsrF (EC 4.2.1.-)	Proteus mirabilis HI4320	Salmonella typhimurium LT2 Gene: STM4078: Autoinducer 2 (AI-2) aldolase LsrF (EC 4.2.1.-)	Serratia proteamaculans 568	Yersinia pestis KIM Gene: y3773: Autoinducer 2 (AI-2) aldolase LsrF (EC 4.2.1.-)	Autoinducer 2 (AI-2) aldolase LsrF (EC 4.2.1.-)
lsrG	Citrobacter koseri ATCC BAA-895	Edwardsiella tarda EIB202	Enterobacter sp. 638 Gene: Ent638_3531: Autoinducer 2 (AI-2) modifying protein LsrG	Erwinia amylovora ATCC 49946	Erwinia carotovora subsp. atroseptica SCRI1043	Escherichia coli str. K-12 substr. MG1655 Gene: b1518: Autoinducer 2 (AI-2) modifying protein LsrG	Klebsiella pneumoniae subsp. pneumoniae MGH 78578 Gene: KPN_03502: Autoinducer 2 (AI-2) modifying protein LsrG	Photorhabdus luminescens subsp. laumondii TTO1 Gene: plu3148: Autoinducer 2 (AI-2) modifying protein LsrG	Proteus mirabilis HI4320	Salmonella typhimurium LT2 Gene: STM4079.S: Autoinducer 2 (AI-2) modifying protein LsrG	Serratia proteamaculans 568	Yersinia pestis KIM Gene: y3774: Autoinducer 2 (AI-2) modifying protein LsrG	Autoinducer 2 (AI-2) modifying protein LsrG

Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.

Red color - the gene is in non-regulated operon.

Gray color - the orthologous gene is absent.

The star symbol - the TFBS is located in upstream region of this gene.

The number - the numeber of homologs (shown only if it is greater than one).

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --

Regulog LsrR - Enterobacteriales

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --