Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulon of LsrR in Salmonella typhimurium LT2

Properties
Regulator type: Transcription factor
TF locus tag: STM4073
Regulator family: SorC
Regulation mode: repressor
Biological process: Quorum sensing; Biofilm formation
Effector: 4,5-dihydroxypentan-2,3-dione
Regulog: LsrR - Enterobacteriales
Statistics of regulated genes:
- Genes 8
- Operons 2
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 19 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function

Position: -233
Score: 6.5
Sequence: GAACATTTCTAAATCATTAACACAATTGTTC
Position: -67
Score: 6.6
Sequence: GAACAATTTCTTTTTCAAAAAACATTTGTTC
Locus tag: STM4074
Name: lsrA
Funciton: Autoinducer 2 (AI-2) ABC transport system, fused AI2 transporter subunits and ATP-binding component
Locus tag: STM4075
Name: lsrC
Funciton: Autoinducer 2 (AI-2) ABC transport system, membrane channel protein LsrC
Locus tag: STM4076
Name: lsrD
Funciton: Autoinducer 2 (AI-2) ABC transport system, membrane channel protein LsrD
Locus tag: STM4077
Name: lsrB
Funciton: Autoinducer 2 (AI-2) ABC transport system, periplasmic AI-2 binding protein LsrB
Locus tag: STM4078
Name: lsrF
Funciton: Autoinducer 2 (AI-2) aldolase LsrF (EC 4.2.1.-)
Locus tag: STM4079.S
Name: lsrG
Funciton: Autoinducer 2 (AI-2) modifying protein LsrG
lsrA
Autoinducer 2 (AI-2) ABC transport system, fused AI2 transporter subunits and ATP-binding component
lsrC
Autoinducer 2 (AI-2) ABC transport system, membrane channel protein LsrC
lsrD
Autoinducer 2 (AI-2) ABC transport system, membrane channel protein LsrD
lsrB
Autoinducer 2 (AI-2) ABC transport system, periplasmic AI-2 binding protein LsrB
lsrF
Autoinducer 2 (AI-2) aldolase LsrF (EC 4.2.1.-)
lsrG
Autoinducer 2 (AI-2) modifying protein LsrG

Position: -219
Score: 6.6
Sequence: GAACAAATGTTTTTTGAAAAAGAAATTGTTC
Position: -53
Score: 6.5
Sequence: GAACAATTGTGTTAATGATTTAGAAATGTTC
Locus tag: STM4073
Name: lsrR
Funciton: Quorum sensing transcriptional repgulator of LsrR, SorC family
Locus tag: STM4072
Name: lsrK
Funciton: Autoinducer 2 (AI-2) kinase LsrK (EC 2.7.1.-)
lsrR
Quorum sensing transcriptional repgulator of LsrR, SorC family
lsrK
Autoinducer 2 (AI-2) kinase LsrK (EC 2.7.1.-)
Export
Regulated Genes [ Tab delimited format ] DOWNLOAD
Regulatory Sites [ FASTA format ] DOWNLOAD