Regulog ManR - Bacteroidaceae

Properties
Regulator type:	Transcription factor
Regulator family:	GntR/Others
Regulation mode:	repressor
Biological process:	Mannose utilization; Mannosides utilization
Effector:	Mannose
Phylum:	Bacteroidetes
Visualization:
	Allows to visualize regulog content in the context of metabolic pathways

Built upon 9 sites [see more]

Member of regulog collections

By taxonomy - Bacteroidaceae
By TF family - GntR/Others
By effector - Mannose
By pathway - Mannose utilization
By pathway - Mannosides utilization

Statistics of regulated genes
Genome	Genes	Operons
Bacteroides cellulosilyticus DSM 14838
Bacteroides dorei DSM 17855
Bacteroides eggerthii DSM 20697	10	3
Bacteroides fragilis NCTC 9343
Bacteroides ovatus ATCC 8483	10	3
Bacteroides plebeius DSM 17135
Bacteroides stercoris ATCC 43183
Bacteroides thetaiotaomicron VPI-5482	11	3
Bacteroides uniformis ATCC 8492
Bacteroides vulgatus ATCC 8482
Bacteroides coprophilus DSM 18228

Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes												Function

CRON 1.
manR	Bacteroides cellulosilyticus DSM 14838	Bacteroides dorei DSM 17855	* Bacteroides eggerthii DSM 20697 Site: position = -119 score = 5.44144 sequence = TACTTTGTTTGAACATATAT Gene: BACEGG_01984: Predicted transcriptional regulator of Mannose utilization, GntR family	Bacteroides fragilis NCTC 9343	* Bacteroides ovatus ATCC 8483 Site: position = 22 score = 5.86143 sequence = TTATATGTTCATACATACTT Gene: BACOVA_03251: Predicted transcriptional regulator of Mannose utilization, GntR family	Bacteroides plebeius DSM 17135	Bacteroides stercoris ATCC 43183	* Bacteroides thetaiotaomicron VPI-5482 Site: position = -108 score = 5.83282 sequence = TAGTATGTCTGAACATATAA Gene: BT2103: Predicted transcriptional regulator of Mannose utilization, GntR family	Bacteroides uniformis ATCC 8492	Bacteroides vulgatus ATCC 8482	Bacteroides coprophilus DSM 18228	Predicted transcriptional regulator of Mannose utilization, GntR family

CRON 2.
manK	Bacteroides cellulosilyticus DSM 14838	Bacteroides dorei DSM 17855	* Bacteroides eggerthii DSM 20697 Site: position = -4 score = 5.60611 sequence = TATTATGTATGAACATGATA Gene: BACEGG_01986: predicted mannose kinase, ROK family	Bacteroides fragilis NCTC 9343	* Bacteroides ovatus ATCC 8483 Site: position = -4 score = 5.13496 sequence = AACTATGTATGAACATGATG Gene: BACOVA_03252: predicted mannose kinase, ROK family	Bacteroides plebeius DSM 17135	Bacteroides stercoris ATCC 43183	Bacteroides thetaiotaomicron VPI-5482	Bacteroides uniformis ATCC 8492	Bacteroides vulgatus ATCC 8482	Bacteroides coprophilus DSM 18228 Gene: BACCOPRO_02564: predicted mannose kinase, ROK family	predicted mannose kinase, ROK family
susC_Man-1	Bacteroides cellulosilyticus DSM 14838	Bacteroides dorei DSM 17855	Bacteroides eggerthii DSM 20697 Gene: BACEGG_01988: TonB-dependent outer membrane transporter of mannan oligomers	Bacteroides fragilis NCTC 9343	Bacteroides ovatus ATCC 8483 Gene: BACOVA_03253: TonB-dependent outer membrane transporter of mannan oligomers	Bacteroides plebeius DSM 17135	Bacteroides stercoris ATCC 43183	* Bacteroides thetaiotaomicron VPI-5482 Site: position = -148 score = 5.86143 sequence = CAATATGTATATACATATAG Gene: BT2107: TonB-dependent outer membrane transporter of mannan oligomers	Bacteroides uniformis ATCC 8492	Bacteroides vulgatus ATCC 8482	Bacteroides coprophilus DSM 18228	TonB-dependent outer membrane transporter of mannan oligomers
susD_Man-1	Bacteroides cellulosilyticus DSM 14838	Bacteroides dorei DSM 17855	Bacteroides eggerthii DSM 20697 Gene: BACEGG_01989: Outer membrane polysaccharide binding protein for mannan oligomers	Bacteroides fragilis NCTC 9343	Bacteroides ovatus ATCC 8483 Gene: BACOVA_03254: Outer membrane polysaccharide binding protein for mannan oligomers	Bacteroides plebeius DSM 17135	Bacteroides stercoris ATCC 43183	Bacteroides thetaiotaomicron VPI-5482 Gene: BT2108: Outer membrane polysaccharide binding protein for mannan oligomers	Bacteroides uniformis ATCC 8492	Bacteroides vulgatus ATCC 8482	Bacteroides coprophilus DSM 18228	Outer membrane polysaccharide binding protein for mannan oligomers
PS51257	Bacteroides cellulosilyticus DSM 14838	Bacteroides dorei DSM 17855	Bacteroides eggerthii DSM 20697 Gene: BACEGG_01990: PROKAR_LIPOPROTEIN	Bacteroides fragilis NCTC 9343	Bacteroides ovatus ATCC 8483 Gene: BACOVA_03255: PROKAR_LIPOPROTEIN	Bacteroides plebeius DSM 17135	Bacteroides stercoris ATCC 43183	Bacteroides thetaiotaomicron VPI-5482	Bacteroides uniformis ATCC 8492	Bacteroides vulgatus ATCC 8482	Bacteroides coprophilus DSM 18228	PROKAR_LIPOPROTEIN
BACOVA_03256	Bacteroides cellulosilyticus DSM 14838	Bacteroides dorei DSM 17855	Bacteroides eggerthii DSM 20697	Bacteroides fragilis NCTC 9343	Bacteroides ovatus ATCC 8483 Gene: BACOVA_03256: Glycoside hydrolase, family 76	Bacteroides plebeius DSM 17135	Bacteroides stercoris ATCC 43183	Bacteroides thetaiotaomicron VPI-5482	Bacteroides uniformis ATCC 8492	Bacteroides vulgatus ATCC 8482	Bacteroides coprophilus DSM 18228	hypothetical protein
BACOVA_03257	Bacteroides cellulosilyticus DSM 14838	Bacteroides dorei DSM 17855	Bacteroides eggerthii DSM 20697	Bacteroides fragilis NCTC 9343	Bacteroides ovatus ATCC 8483 Gene: BACOVA_03257: Glycoside hydrolase, family 76	Bacteroides plebeius DSM 17135	Bacteroides stercoris ATCC 43183	Bacteroides thetaiotaomicron VPI-5482	Bacteroides uniformis ATCC 8492	Bacteroides vulgatus ATCC 8482	Bacteroides coprophilus DSM 18228	hypothetical protein
manA	Bacteroides cellulosilyticus DSM 14838	Bacteroides dorei DSM 17855	Bacteroides eggerthii DSM 20697 Gene: BACEGG_01991: putative alpha-1,2-mannosidase	Bacteroides fragilis NCTC 9343	Bacteroides ovatus ATCC 8483 Gene: BACOVA_03258: putative alpha-1,2-mannosidase	Bacteroides plebeius DSM 17135	Bacteroides stercoris ATCC 43183	Bacteroides thetaiotaomicron VPI-5482 Gene: BT2111: putative alpha-1,2-mannosidase	Bacteroides uniformis ATCC 8492	Bacteroides vulgatus ATCC 8482	2 Bacteroides coprophilus DSM 18228 Gene: BACCOPRO_02570: putative alpha-1,2-mannosidase Gene: BACCOPRO_02569: putative alpha-1,2-mannosidase	putative alpha-1,2-mannosidase
manP	Bacteroides cellulosilyticus DSM 14838	Bacteroides dorei DSM 17855	Bacteroides eggerthii DSM 20697 Gene: BACEGG_01993: Predicted mannose transporter, FucP family	Bacteroides fragilis NCTC 9343	Bacteroides ovatus ATCC 8483 Gene: BACOVA_03259: Predicted mannose transporter, FucP family	Bacteroides plebeius DSM 17135	Bacteroides stercoris ATCC 43183	Bacteroides thetaiotaomicron VPI-5482 Gene: BT2106: Predicted mannose transporter, FucP family	Bacteroides uniformis ATCC 8492	Bacteroides vulgatus ATCC 8482	Bacteroides coprophilus DSM 18228 Gene: BACCOPRO_02567: Predicted mannose transporter, FucP family	Predicted mannose transporter, FucP family
BACEGG_01987	Bacteroides cellulosilyticus DSM 14838	Bacteroides dorei DSM 17855	Bacteroides eggerthii DSM 20697 Gene: BACEGG_01987: hypothetical protein	Bacteroides fragilis NCTC 9343	Bacteroides ovatus ATCC 8483	Bacteroides plebeius DSM 17135	Bacteroides stercoris ATCC 43183	Bacteroides thetaiotaomicron VPI-5482	Bacteroides uniformis ATCC 8492	Bacteroides vulgatus ATCC 8482	Bacteroides coprophilus DSM 18228	hypothetical protein
BACEGG_01992	Bacteroides cellulosilyticus DSM 14838	Bacteroides dorei DSM 17855	Bacteroides eggerthii DSM 20697 Gene: BACEGG_01992: hypothetical protein	Bacteroides fragilis NCTC 9343	Bacteroides ovatus ATCC 8483	Bacteroides plebeius DSM 17135	Bacteroides stercoris ATCC 43183	Bacteroides thetaiotaomicron VPI-5482	Bacteroides uniformis ATCC 8492	Bacteroides vulgatus ATCC 8482	Bacteroides coprophilus DSM 18228	hypothetical protein
BT2109	Bacteroides cellulosilyticus DSM 14838	Bacteroides dorei DSM 17855	Bacteroides eggerthii DSM 20697	Bacteroides fragilis NCTC 9343	Bacteroides ovatus ATCC 8483	Bacteroides plebeius DSM 17135	Bacteroides stercoris ATCC 43183	Bacteroides thetaiotaomicron VPI-5482 Gene: BT2109: Galactose-binding domain-like	Bacteroides uniformis ATCC 8492	Bacteroides vulgatus ATCC 8482	Bacteroides coprophilus DSM 18228	hypothetical protein
BT2110	Bacteroides cellulosilyticus DSM 14838	Bacteroides dorei DSM 17855	Bacteroides eggerthii DSM 20697	Bacteroides fragilis NCTC 9343	Bacteroides ovatus ATCC 8483	Bacteroides plebeius DSM 17135	Bacteroides stercoris ATCC 43183	Bacteroides thetaiotaomicron VPI-5482 Gene: BT2110: hypothetical protein	Bacteroides uniformis ATCC 8492	Bacteroides vulgatus ATCC 8482	Bacteroides coprophilus DSM 18228	hypothetical protein
BT2112	Bacteroides cellulosilyticus DSM 14838	Bacteroides dorei DSM 17855	Bacteroides eggerthii DSM 20697	Bacteroides fragilis NCTC 9343	Bacteroides ovatus ATCC 8483	Bacteroides plebeius DSM 17135	Bacteroides stercoris ATCC 43183	Bacteroides thetaiotaomicron VPI-5482 Gene: BT2112: Glycosyl hydrolases family 43	Bacteroides uniformis ATCC 8492	Bacteroides vulgatus ATCC 8482	Bacteroides coprophilus DSM 18228	hypothetical protein
BT2113	Bacteroides cellulosilyticus DSM 14838	Bacteroides dorei DSM 17855	Bacteroides eggerthii DSM 20697	Bacteroides fragilis NCTC 9343	Bacteroides ovatus ATCC 8483	Bacteroides plebeius DSM 17135	Bacteroides stercoris ATCC 43183	Bacteroides thetaiotaomicron VPI-5482 Gene: BT2113: Glycosyl hydrolases family 38, putative Alpha-mannosidase	Bacteroides uniformis ATCC 8492	Bacteroides vulgatus ATCC 8482	Bacteroides coprophilus DSM 18228	Alpha-mannosidase (EC 3.2.1.24)
pmi	Bacteroides cellulosilyticus DSM 14838	Bacteroides dorei DSM 17855	* Bacteroides eggerthii DSM 20697 Site: position = -29 score = 5.44144 sequence = ATATATGTTCAAACAAAGTA Gene: BACEGG_01985: Mannose-6-phosphate isomerase (EC 5.3.1.8)	Bacteroides fragilis NCTC 9343	* Bacteroides ovatus ATCC 8483 Site: position = -4 score = 5.86143 sequence = AAGTATGTATGAACATATAA Gene: BACOVA_03250: Mannose-6-phosphate isomerase (EC 5.3.1.8)	Bacteroides plebeius DSM 17135	Bacteroides stercoris ATCC 43183	* Bacteroides thetaiotaomicron VPI-5482 Site: position = -41 score = 5.83282 sequence = TTATATGTTCAGACATACTA Gene: BT2104: Mannose-6-phosphate isomerase (EC 5.3.1.8) / predicted mannose kinase, ROK family	Bacteroides uniformis ATCC 8492	Bacteroides vulgatus ATCC 8482	Bacteroides coprophilus DSM 18228 Gene: BACCOPRO_02563: Mannose-6-phosphate isomerase (EC 5.3.1.8)	Mannose-6-phosphate isomerase (EC 5.3.1.8)
manA	Bacteroides cellulosilyticus DSM 14838	Bacteroides dorei DSM 17855	Bacteroides eggerthii DSM 20697	Bacteroides fragilis NCTC 9343	Bacteroides ovatus ATCC 8483	Bacteroides plebeius DSM 17135	Bacteroides stercoris ATCC 43183	Bacteroides thetaiotaomicron VPI-5482 Gene: BT2105: putative alpha-1,2-mannosidase	Bacteroides uniformis ATCC 8492	Bacteroides vulgatus ATCC 8482	Bacteroides coprophilus DSM 18228	putative alpha-1,2-mannosidase

Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.

Red color - the gene is in non-regulated operon.

Gray color - the orthologous gene is absent.

The star symbol - the TFBS is located in upstream region of this gene.

The number - the numeber of homologs (shown only if it is greater than one).

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	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --

Regulog ManR - Bacteroidaceae

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --