Regulog Glycine - Clostridiaceae
| Regulator type: | RNA regulatory element |
| Name: | Glycine |
| RFAM: | RF00504 |
| Regulation mode: | |
| Biological process: | Glycine metabolism |
| Effector: | Glycine |
| Phylum: | Firmicutes |
Member of regulog collections
- By taxonomy - Clostridiaceae
- By RNA motif - Glycine
- By effector - Glycine
- By pathway - Glycine metabolism
| Genome | Genes | Operons |
|---|---|---|
| Clostridium kluyveri DSM 555 | 7 | 3 |
| Clostridium sp. SS2/1 | 1 | 1 |
| Clostridium cellulolyticum H10 | 2 | 1 |
| Clostridium phytofermentans ISDg | ||
| Clostridium tetani E88 | 2 | 2 |
| Clostridium acetobutylicum ATCC 824 | 1 | 1 |
| Clostridium botulinum A str. ATCC 3502 | 8 | 1 |
| Clostridium novyi NT | 1 | 1 |
| Clostridium perfringens ATCC 13124 | 1 | 1 |
| Clostridium difficile 630 | 8 | 3 |
| Clostridium beijerincki NCIMB 8052 | 2 | 2 |
| Clostridium sp. OhILAs | 12 | 2 |
| Clostridium sp. L2-50 | ||
| Clostridium scindens ATCC 35704 | 11 | 2 |
| Clostridium nexile DSM 1787 | 1 | 1 |
| Clostridium leptum DSM 753 | 1 | 1 |
| Clostridium hiranonis DSM 13275 | 12 | 3 |
| Clostridium butyricum 5521 | 1 | 1 |
| Clostridium bolteae ATCC BAA-613 | 10 | 3 |
| Clostridium bartlettii DSM 16795 | 2 | 2 |
| Genes | Function | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| CRON 1. | |||||||||||||||||||||
| glyP |
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Clostridium sp. SS2/1 Site: position = -216 score = 61.45 sequence = AGAAATGAACTCTGG... Gene: CLOSS21_00738: Sodium/glycine symporter GlyP |
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Clostridium tetani E88 Site: position = -100 score = 72.39 sequence = TGGACGAAACTCTGG... Site: position = -186 score = 35.32 sequence = GATGAAGGTAATAGG... Gene: CTC01975: Sodium/glycine symporter GlyP |
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Clostridium novyi NT Site: position = -261 score = 32.82 sequence = GATGAAGATAGCGGG... Site: position = -174 score = 66.31 sequence = TGGACGAGCCTCTGG... Gene: NT01CX_2425: Sodium/glycine symporter GlyP |
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Clostridium perfringens ATCC 13124 Site: position = -168 score = 72.69 sequence = TGGACGAGCCTCTGG... Site: position = -242 score = 48.54 sequence = GATGAAGGTAATGGG... Gene: CPF_1672: Sodium/glycine symporter GlyP |
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Clostridium difficile 630 Site: position = -277 score = 65.62 sequence = TACGGAACTCTGGAG... Site: position = -358 score = 34.92 sequence = AAGATTTTATAGAAG... Gene: CD2276: Sodium/glycine symporter GlyP |
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Clostridium leptum DSM 753 Site: position = -122 score = 58.65 sequence = GGCGACTCTCTGGAG... Gene: CLOLEP_01924: Sodium/glycine symporter GlyP |
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Clostridium butyricum 5521 Site: position = -425 score = 46.55 sequence = GATGAAGATGGTGGG... Site: position = -327 score = 56.78 sequence = GCCTCTGGAGAGACT... Gene: CBY_0150: Sodium/glycine symporter GlyP |
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Clostridium bartlettii DSM 16795 Site: position = -264 score = 67.56 sequence = TAGGATACTCTGGAG... Site: position = -349 score = 38.76 sequence = GAAACTTTACAGAAG... Gene: CLOBAR_02646: Sodium/glycine symporter GlyP |
Sodium/glycine symporter GlyP |
| CRON 2. | |||||||||||||||||||||
| potE |
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2
Clostridium difficile 630 Gene: CD2465: Amino acid permease family protein Gene: CD1555: Amino acid permease family protein |
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Clostridium scindens ATCC 35704 Site: position = -198 score = 30.19 sequence = GAAGTAGCGAGGAAG... Site: position = -91 score = 48.45 sequence = GATGGGACTCTGGAA... Gene: CLOSCI_00442: Amino acid permease family protein |
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*3
Clostridium bartlettii DSM 16795 Gene: CLOBAR_00193: Amino acid permease family protein Gene: CLOBAR_02017: Amino acid permease family protein Site: position = -266 score = 47.09 sequence = TGAAATTTATGGGAG... Gene: CLOBAR_00195: Amino acid permease family protein |
Amino acid permease family protein |
| CRON 3. | |||||||||||||||||||||
| pfoR |
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Gene: CBO0612: Perfringolysin O regulator protein PfoR |
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Gene: CLOSCI_00036: Perfringolysin O regulator protein PfoR |
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Gene: CLOHIR_00466: Perfringolysin O regulator protein PfoR |
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Clostridium bolteae ATCC BAA-613 Site: position = -386 score = 49.23 sequence = CGGACGGGACTCTGG... Site: position = -463 score = 49.83 sequence = GTTGATGAATTCGGG... Gene: CLOBOL_00277: Perfringolysin O regulator protein PfoR |
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Perfringolysin O regulator protein PfoR |
| CRON 4. | |||||||||||||||||||||
| COG0697 |
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*2
Clostridium tetani E88 Site: position = -252 score = 57.3 sequence = TGAAGAGTATAAGAG... Gene: CTC01813: Permease of the drug/metabolite transporter (DMT) superfamily Gene: CTC01502: Permease of the drug/metabolite transporter (DMT) superfamily |
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Gene: CBO1334: Permease of the drug/metabolite transporter (DMT) superfamily |
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Gene: CPF_0320: Permease of the drug/metabolite transporter (DMT) superfamily |
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Gene: CLOHIR_01070: Permease of the drug/metabolite transporter (DMT) superfamily |
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Permease of the drug/metabolite transporter (DMT) superfamily |
| CRON 5. | |||||||||||||||||||||
| glyA2 |
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*
Clostridium bolteae ATCC BAA-613 Site: position = -349 score = 47.83 sequence = TGATGGATTCGGGAG... Site: position = -272 score = 34.04 sequence = GACGAAACTCTGGAA... Gene: CLOBOL_05294: Serine hydroxymethyltransferase (EC 2.1.2.1) |
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Serine hydroxymethyltransferase (EC 2.1.2.1) |
| gcvT |
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Clostridium kluyveri DSM 555 Site: position = -128 score = 34.1 sequence = TTGACGAAACTCTGG... Site: position = -213 score = 55.8 sequence = AATGATAAATTTAGG... Gene: CKL_1774: Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10) |
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Gene: null: Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10) |
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Gene: CBO0696: Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10) |
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Clostridium sp. OhILAs Site: position = -468 score = 49.38 sequence = TGAAAATAACGAGAG... Site: position = -370 score = 57.87 sequence = GATGAATCTCTGGAG... Gene: Clos_0065: Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10) |
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*2
Clostridium bolteae ATCC BAA-613 Gene: CLOBOL_05295: Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10) Site: position = -125 score = 39.84 sequence = CGGACGATACTCTGG... Site: position = -265 score = 39.65 sequence = GAAGATGGATTCGGG... Gene: CLOBOL_01537: Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10) |
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Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10) |
| gcvH |
Gene: CKL_1773: Glycine cleavage system H protein |
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Gene: null: Glycine cleavage system H protein |
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Gene: CBO0697: Glycine cleavage system H protein |
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Gene: Clos_0066: Glycine cleavage system H protein |
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2
Clostridium bolteae ATCC BAA-613 Gene: CLOBOL_05296: Glycine cleavage system H protein Gene: CLOBOL_01536: Glycine cleavage system H protein |
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Glycine cleavage system H protein |
| gcvP1 |
Gene: CKL_1772: Glycine dehydrogenase [decarboxylating] (glycine cleavage system P1 protein) (EC 1.4.4.2) |
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Gene: null: Glycine dehydrogenase [decarboxylating] (glycine cleavage system P1 protein) (EC 1.4.4.2) |
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Gene: CBO0698: Glycine dehydrogenase [decarboxylating] (glycine cleavage system P1 protein) (EC 1.4.4.2) |
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Clostridium difficile 630 Site: position = -213 score = 41.99 sequence = GATGGGACTCTGGAG... Site: position = -313 score = 53.0 sequence = TGAGATTAGCGAGAG... Gene: CD1657: Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10) / Glycine cleavage system H protein / Glycine dehydrogenase [decarboxylating] (glycine cleavage system P1 protein) (EC 1.4.4.2) |
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Gene: Clos_0067: Glycine dehydrogenase [decarboxylating] (glycine cleavage system P1 protein) (EC 1.4.4.2) |
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3
Clostridium bolteae ATCC BAA-613 Gene: CLOBOL_05297: Glycine dehydrogenase [decarboxylating] (glycine cleavage system P1 protein) (EC 1.4.4.2) Gene: CLOBOL_06282: Glycine dehydrogenase [decarboxylating] (glycine cleavage system P1 protein) (EC 1.4.4.2) Gene: CLOBOL_01535: Glycine dehydrogenase [decarboxylating] (glycine cleavage system P1 protein) (EC 1.4.4.2) |
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Glycine dehydrogenase [decarboxylating] (glycine cleavage system P1 protein) (EC 1.4.4.2) |
| gcvP2 |
Gene: CKL_1771: Glycine dehydrogenase [decarboxylating] (glycine cleavage system P2 protein) (EC 1.4.4.2) |
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Gene: null: Glycine dehydrogenase [decarboxylating] (glycine cleavage system P2 protein) (EC 1.4.4.2) |
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Gene: CBO0699: Glycine dehydrogenase [decarboxylating] (glycine cleavage system P2 protein) (EC 1.4.4.2) |
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Gene: CD1658: Glycine dehydrogenase [decarboxylating] (glycine cleavage system P2 protein) (EC 1.4.4.2) |
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Gene: Clos_0068: Glycine dehydrogenase [decarboxylating] (glycine cleavage system P2 protein) (EC 1.4.4.2) |
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3
Clostridium bolteae ATCC BAA-613 Gene: CLOBOL_05298: Glycine dehydrogenase [decarboxylating] (glycine cleavage system P2 protein) (EC 1.4.4.2) Gene: CLOBOL_06283: Glycine dehydrogenase [decarboxylating] (glycine cleavage system P2 protein) (EC 1.4.4.2) Gene: CLOBOL_01534: Glycine dehydrogenase [decarboxylating] (glycine cleavage system P2 protein) (EC 1.4.4.2) |
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Glycine dehydrogenase [decarboxylating] (glycine cleavage system P2 protein) (EC 1.4.4.2) |
| CRON 6. | |||||||||||||||||||||
| grdX |
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Clostridium botulinum A str. ATCC 3502 Site: position = -159 score = 38.94 sequence = GACAAAACTCTGGAA... Site: position = -239 score = 20.82 sequence = TATCCTTATAGGATA... Gene: CBO1255: putative glycine reductase complex component |
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Clostridium difficile 630 Site: position = -215 score = 47.13 sequence = GATGAAGAGTATGGG... Gene: CD2357: putative glycine reductase complex component |
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Clostridium sp. OhILAs Site: position = -194 score = 40.5 sequence = GACGGTACTCTGAAA... Site: position = -298 score = 52.62 sequence = AGAAGAGTGCGGGAG... Gene: Clos_0953: putative glycine reductase complex component |
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Clostridium scindens ATCC 35704 Site: position = -205 score = 58.51 sequence = ATGATGTTTCTCAAG... Gene: CLOSCI_00776: putative glycine reductase complex component |
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Clostridium hiranonis DSM 13275 Site: position = -185 score = 33.99 sequence = TGAAGCGTATAGGAG... Gene: CLOHIR_00161: putative glycine reductase complex component |
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2
Clostridium bolteae ATCC BAA-613 Gene: CLOBOL_01011: putative glycine reductase complex component Gene: CLOBOL_01874: putative glycine reductase complex component |
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putative glycine reductase complex component |
| grdE |
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Gene: CBO1256: Glycine reductase component B (EC 1.21.4.2) |
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Gene: CD2354: Glycine reductase component B (EC 1.21.4.2) |
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Gene: Clos_0956: Glycine reductase component B (EC 1.21.4.2) |
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Gene: CLOSCI_00775: Glycine reductase component B (EC 1.21.4.2) |
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Gene: CLOHIR_00164: Glycine reductase component B (EC 1.21.4.2) |
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2
Clostridium bolteae ATCC BAA-613 Gene: CLOBOL_01012: Glycine reductase component B (EC 1.21.4.2) Gene: CLOBOL_01873: Glycine reductase component B (EC 1.21.4.2) |
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Glycine reductase component B (EC 1.21.4.2) |
| grdB |
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Gene: CBO1257: Glycine reductase complex component B gamma subunit |
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Gene: CD2351: Glycine reductase complex component B gamma subunit |
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Gene: Clos_0958: Glycine reductase complex component B gamma subunit |
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2
Clostridium scindens ATCC 35704 Gene: CLOSCI_00774: Glycine reductase complex component B gamma subunit Gene: CLOSCI_00773: Glycine reductase complex component B gamma subunit |
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2
Clostridium hiranonis DSM 13275 Gene: CLOHIR_00167: Glycine reductase complex component B gamma subunit Gene: CLOHIR_00168: Glycine reductase complex component B gamma subunit |
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4
Clostridium bolteae ATCC BAA-613 Gene: CLOBOL_01871: Glycine reductase complex component B gamma subunit Gene: CLOBOL_01872: Glycine reductase complex component B gamma subunit Gene: CLOBOL_01014: Glycine reductase complex component B gamma subunit Gene: CLOBOL_01013: Glycine reductase complex component B gamma subunit |
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Glycine reductase complex component B gamma subunit |
| trxB |
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Gene: CBO1259: Thioredoxin reductase (EC 1.8.1.9) |
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Gene: CD2356: Thioredoxin reductase (EC 1.8.1.9) |
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Gene: Clos_0954: Thioredoxin reductase (EC 1.8.1.9) |
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Gene: CLOSCI_00772: Thioredoxin reductase (EC 1.8.1.9) |
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Gene: CLOHIR_00162: Thioredoxin reductase (EC 1.8.1.9) |
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Gene: CLOBOL_01870: Thioredoxin reductase (EC 1.8.1.9) |
Gene: CLOBAR_02651: Thioredoxin reductase (EC 1.8.1.9) |
Thioredoxin reductase (EC 1.8.1.9) |
| trxA |
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Gene: CBO1260: Thioredoxin |
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Gene: CD2355: Thioredoxin |
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Gene: Clos_0955: Thioredoxin |
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Gene: CLOSCI_00771: Thioredoxin |
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Gene: CLOHIR_00163: Thioredoxin |
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2
Clostridium bolteae ATCC BAA-613 Gene: CLOBOL_01869: Thioredoxin Gene: CLOBOL_03144: Thioredoxin |
Gene: CLOBAR_02650: Thioredoxin |
Thioredoxin |
| grdA |
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Gene: CBO1261: Glycine reductase complex protein A |
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Gene: CD2352: Glycine reductase complex protein A |
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Gene: Clos_0957: Glycine reductase complex protein A |
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2
Clostridium scindens ATCC 35704 Gene: CLOSCI_00770: Glycine reductase complex protein A Gene: CLOSCI_00769: Glycine reductase complex protein A |
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2
Clostridium hiranonis DSM 13275 Gene: CLOHIR_00165: Glycine reductase complex protein A Gene: CLOHIR_00166: Glycine reductase complex protein A |
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4
Clostridium bolteae ATCC BAA-613 Gene: CLOBOL_01867: Glycine reductase complex protein A Gene: CLOBOL_01868: Glycine reductase complex protein A Gene: CLOBOL_03143: Glycine reductase complex protein A Gene: CLOBOL_03142: Glycine reductase complex protein A |
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Glycine reductase complex protein A |
| grdC |
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Gene: CBO1263: Glycine reductase component C chain 1 |
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Gene: CD2349: Glycine reductase component C chain 1 |
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Gene: Clos_0959: Glycine reductase component C chain 1 |
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Gene: CLOSCI_00768: Glycine reductase component C chain 1 |
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Gene: CLOHIR_00169: Glycine reductase component C chain 1 |
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Gene: CLOBOL_01866: Glycine reductase component C chain 1 |
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Glycine reductase component C chain 1 |
| grdD |
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Gene: CBO1264: Glycine reductase component C chain 2 |
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Gene: CD2348: Glycine reductase component C chain 2 |
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Gene: Clos_0960: Glycine reductase component C chain 2 |
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Gene: CLOSCI_00767: Glycine reductase component C chain 2 |
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Gene: CLOHIR_00170: Glycine reductase component C chain 2 |
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Gene: CLOBOL_01865: Glycine reductase component C chain 2 |
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Glycine reductase component C chain 2 |
| CRON 7. | |||||||||||||||||||||
| serC |
Gene: CKL_3817: Serine--pyruvate aminotransferase (EC 2.6.1.-) |
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Clostridium cellulolyticum H10 Site: position = -323 score = 45.46 sequence = TGATTGTTGTGGGAG... Site: position = -244 score = 58.85 sequence = GACGGACCTCTGGAG... Gene: Ccel_1188: Serine--pyruvate aminotransferase (EC 2.6.1.-) |
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Gene: CTC00695: Serine--pyruvate aminotransferase (EC 2.6.1.-) |
Gene: CAC0014: Serine--pyruvate aminotransferase (EC 2.6.1.-) |
Gene: CBO1126: Serine--pyruvate aminotransferase (EC 2.6.1.-) |
Gene: NT01CX_0729: Serine--pyruvate aminotransferase (EC 2.6.1.-) |
Gene: CPF_0060: Serine--pyruvate aminotransferase (EC 2.6.1.-) |
Gene: CD0994: Serine--pyruvate aminotransferase (EC 2.6.1.-) |
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Gene: CBY_3790: Serine--pyruvate aminotransferase (EC 2.6.1.-) |
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Gene: CLOBAR_01071: Serine--pyruvate aminotransferase (EC 2.6.1.-) |
Serine--pyruvate aminotransferase (EC 2.6.1.-) |
| serA |
Gene: CKL_3816: D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) |
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Gene: Ccel_1189: D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) |
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Gene: CTC00694: D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) |
Gene: CAC0015: D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) |
Gene: CBO1127: D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) |
Gene: NT01CX_0728: D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) |
Gene: CPF_0061: D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) |
Gene: CD0995: D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) |
Gene: Cbei_4927: D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) |
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Gene: CBY_3791: D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) |
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Gene: CLOBAR_01070: D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) |
D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) |
| CRON 8. | |||||||||||||||||||||
| gcvR |
*
Clostridium kluyveri DSM 555 Site: position = -229 score = 61.37 sequence = TGGACGAACCTCTGG... Gene: CKL_0776: ACT domain containing transcriptional regulators, related to gcvR of E.coli |
Gene: CLOSS21_02622: ACT domain containing transcriptional regulators, related to gcvR of E.coli |
Gene: Ccel_1723: ACT domain containing transcriptional regulators, related to gcvR of E.coli |
Gene: null: ACT domain containing transcriptional regulators, related to gcvR of E.coli |
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Gene: CAC0478: ACT domain containing transcriptional regulators, related to gcvR of E.coli |
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Gene: NT01CX_0174: ACT domain containing transcriptional regulators, related to gcvR of E.coli |
Gene: CPF_1747: ACT domain containing transcriptional regulators, related to gcvR of E.coli |
Gene: CD2627: ACT domain containing transcriptional regulators, related to gcvR of E.coli |
Gene: Cbei_2351: ACT domain containing transcriptional regulators, related to gcvR of E.coli |
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Gene: CLOL250_00210: ACT domain containing transcriptional regulators, related to gcvR of E.coli |
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Gene: CLONEX_01555: ACT domain containing transcriptional regulators, related to gcvR of E.coli |
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Gene: CBY_3159: ACT domain containing transcriptional regulators, related to gcvR of E.coli |
Gene: CLOBOL_02936: ACT domain containing transcriptional regulators, related to gcvR of E.coli |
Gene: CLOBAR_02783: ACT domain containing transcriptional regulators, related to gcvR of E.coli |
ACT domain containing transcriptional regulators, related to gcvR of E.coli |
| COG2848 |
Gene: CKL_0775: hypothetical protein |
Gene: CLOSS21_02623: hypothetical protein |
Gene: Ccel_1722: hypothetical protein |
Gene: null: hypothetical protein |
Gene: CTC01034: hypothetical protein |
Gene: CAC0479: hypothetical protein |
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Gene: NT01CX_0175: hypothetical protein |
Gene: CPF_1748: hypothetical protein |
Gene: CD2626: hypothetical protein |
Gene: Cbei_2352: hypothetical protein |
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Gene: CLOL250_00209: hypothetical protein |
Gene: CLOSCI_00641: hypothetical protein |
Gene: CLONEX_01556: hypothetical protein |
Gene: CLOLEP_03314: hypothetical protein |
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Gene: CBY_3160: hypothetical protein |
Gene: CLOBOL_02935: hypothetical protein |
Gene: CLOBAR_02782: hypothetical protein |
hypothetical protein |
| CRON 9. | |||||||||||||||||||||
| alsT |
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Clostridium nexile DSM 1787 Site: position = -187 score = 51.25 sequence = TTAAAAAAACTCTGG... Gene: CLONEX_04109: Na+/alanine symporter |
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Clostridium hiranonis DSM 13275 Site: position = -204 score = 63.37 sequence = TTAGGAACTCTGGAG... Gene: CLOHIR_02272: Na+/alanine symporter |
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Gene: CLOBOL_06470: Na+/alanine symporter |
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Na+/alanine symporter |
| CRON 10. | |||||||||||||||||||||
| COG2860 |
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Gene: Ccel_3364: membrane protein of unknown function UPF0126 |
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Clostridium beijerincki NCIMB 8052 Site: position = -155 score = 39.1 sequence = CTGACGAAACTCTGG... Site: position = -237 score = 48.39 sequence = TGTGACGAATTTGGG... Gene: Cbei_2529: membrane protein of unknown function UPF0126 |
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membrane protein of unknown function UPF0126 |
| CRON 11. | |||||||||||||||||||||
| COG1748 |
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Gene: Ccel_1128: Carboxynorspermidine dehydrogenase family, COG1748 |
Gene: null: Carboxynorspermidine dehydrogenase family, COG1748 |
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Gene: Cbei_4409: Carboxynorspermidine dehydrogenase family, COG1748 |
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2
Clostridium nexile DSM 1787 Gene: CLONEX_02167: Carboxynorspermidine dehydrogenase family, COG1748 Gene: CLONEX_02165: Carboxynorspermidine dehydrogenase family, COG1748 |
Gene: CLOLEP_01502: Carboxynorspermidine dehydrogenase family, COG1748 |
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Clostridium hiranonis DSM 13275 Site: position = -318 score = 31.41 sequence = TGAGGACTGCATTAG... Site: position = -217 score = 27.54 sequence = GACGATACTTTGGAG... Gene: CLOHIR_00302: Carboxynorspermidine dehydrogenase family, COG1748 |
Gene: CBY_4120: Carboxynorspermidine dehydrogenase family, COG1748 |
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Carboxynorspermidine dehydrogenase family, COG1748 |
| CRON 12. | |||||||||||||||||||||
| aroP |
*
Clostridium kluyveri DSM 555 Site: position = -373 score = 51.76 sequence = ATCCTTGGAGAGACT... Site: position = -469 score = 38.66 sequence = GATGAAAATAGTGGG... Gene: CKL_3526: D-serine/D-alanine/glycine transporter |
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Clostridium acetobutylicum ATCC 824 Site: position = -222 score = 53.73 sequence = ACCCTTGGAGAGACT... Site: position = -317 score = 40.71 sequence = GATGAAGTTAGCGGG... Gene: CAC1472: D-serine/D-alanine/glycine transporter |
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Clostridium beijerincki NCIMB 8052 Site: position = -220 score = 52.62 sequence = ACCTTGGAGAGACTC... Site: position = -316 score = 47.22 sequence = GATGAAGATAGCGGG... Gene: Cbei_3972: D-serine/D-alanine/glycine transporter |
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D-serine/D-alanine/glycine transporter |
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |