Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulon of Glycine in Clostridium bolteae ATCC BAA-613

Properties
Regulator type: RNA regulatory element
Name: Glycine
RFAM: RF00504
Regulation mode:
Biological process: Glycine metabolism
Effector: Glycine
Regulog: Glycine - Clostridiaceae
Under regulation:
- Genes 10
- Operons 3
Member of regulog collections
Regulated operons
Locus Tag Name Function

Position: -463
Score: 49.8
Sequence: GTTGATGAATTCGGG...
Position: -386
Score: 49.2
Sequence: CGGACGGGACTCTGG...
Locus tag: CLOBOL_00277
Name: pfoR
Funciton: Perfringolysin O regulator protein PfoR
pfoR
Perfringolysin O regulator protein PfoR

Position: -349
Score: 47.8
Sequence: TGATGGATTCGGGAG...
Position: -272
Score: 34
Sequence: GACGAAACTCTGGAA...
Locus tag: CLOBOL_05294
Name: glyA2
Funciton: Serine hydroxymethyltransferase (EC 2.1.2.1)
Locus tag: CLOBOL_05295
Name: gcvT
Funciton: Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10)
Locus tag: CLOBOL_05296
Name: gcvH
Funciton: Glycine cleavage system H protein
Locus tag: CLOBOL_05297
Name: gcvP1
Funciton: Glycine dehydrogenase [decarboxylating] (glycine cleavage system P1 protein) (EC 1.4.4.2)
Locus tag: CLOBOL_05298
Name: gcvP2
Funciton: Glycine dehydrogenase [decarboxylating] (glycine cleavage system P2 protein) (EC 1.4.4.2)
glyA2
Serine hydroxymethyltransferase (EC 2.1.2.1)
gcvT
Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10)
gcvH
Glycine cleavage system H protein
gcvP1
Glycine dehydrogenase [decarboxylating] (glycine cleavage system P1 protein) (EC 1.4.4.2)
gcvP2
Glycine dehydrogenase [decarboxylating] (glycine cleavage system P2 protein) (EC 1.4.4.2)

Position: -265
Score: 39.7
Sequence: GAAGATGGATTCGGG...
Position: -125
Score: 39.8
Sequence: CGGACGATACTCTGG...
Locus tag: CLOBOL_01537
Name: gcvT
Funciton: Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10)
Locus tag: CLOBOL_01536
Name: gcvH
Funciton: Glycine cleavage system H protein
Locus tag: CLOBOL_01535
Name: gcvP1
Funciton: Glycine dehydrogenase [decarboxylating] (glycine cleavage system P1 protein) (EC 1.4.4.2)
Locus tag: CLOBOL_01534
Name: gcvP2
Funciton: Glycine dehydrogenase [decarboxylating] (glycine cleavage system P2 protein) (EC 1.4.4.2)
gcvT
Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10)
gcvH
Glycine cleavage system H protein
gcvP1
Glycine dehydrogenase [decarboxylating] (glycine cleavage system P1 protein) (EC 1.4.4.2)
gcvP2
Glycine dehydrogenase [decarboxylating] (glycine cleavage system P2 protein) (EC 1.4.4.2)
Export
Regulated Genes [ Tab delimited format ] DOWNLOAD
Regulatory Sites [ FASTA format ] DOWNLOAD