Regulon of Glycine in Clostridium sp. OhILAs

Properties
Regulator type:	RNA regulatory element
Name:	Glycine
RFAM:	RF00504
Regulation mode:
Biological process:	Glycine metabolism
Effector:	Glycine
Regulog:	Glycine - Clostridiaceae
Under regulation:
- Genes	12
- Operons	2

Member of regulog collections

By taxonomy - Clostridiaceae
By RNA motif - Glycine
By effector - Glycine
By pathway - Glycine metabolism

Regulated operons
	Locus Tag	Name	Function
Position: -468 Score: 49.4 Sequence: TGAAAATAACGAGAG... Position: -370 Score: 57.9 Sequence: GATGAATCTCTGGAG... Locus tag: Clos_0065 Name: gcvT Funciton: Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10) Locus tag: Clos_0066 Name: gcvH Funciton: Glycine cleavage system H protein Locus tag: Clos_0067 Name: gcvP1 Funciton: Glycine dehydrogenase [decarboxylating] (glycine cleavage system P1 protein) (EC 1.4.4.2) Locus tag: Clos_0068 Name: gcvP2 Funciton: Glycine dehydrogenase [decarboxylating] (glycine cleavage system P2 protein) (EC 1.4.4.2)
	Clos_0065	gcvT	Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10)
	Clos_0066	gcvH	Glycine cleavage system H protein
	Clos_0067	gcvP1	Glycine dehydrogenase [decarboxylating] (glycine cleavage system P1 protein) (EC 1.4.4.2)
	Clos_0068	gcvP2	Glycine dehydrogenase [decarboxylating] (glycine cleavage system P2 protein) (EC 1.4.4.2)
Position: -298 Score: 52.6 Sequence: AGAAGAGTGCGGGAG... Position: -194 Score: 40.5 Sequence: GACGGTACTCTGAAA... Locus tag: Clos_0953 Name: grdX Funciton: putative glycine reductase complex component Locus tag: Clos_0954 Name: trxB Funciton: Thioredoxin reductase (EC 1.8.1.9) Locus tag: Clos_0955 Name: trxA Funciton: Thioredoxin Locus tag: Clos_0956 Name: grdE Funciton: Glycine reductase component B (EC 1.21.4.2) Locus tag: Clos_0957 Name: grdA Funciton: Glycine reductase complex protein A Locus tag: Clos_0958 Name: grdB Funciton: Glycine reductase complex component B gamma subunit Locus tag: Clos_0959 Name: grdC Funciton: Glycine reductase component C chain 1 Locus tag: Clos_0960 Name: grdD Funciton: Glycine reductase component C chain 2
	Clos_0953	grdX	putative glycine reductase complex component
	Clos_0954	trxB	Thioredoxin reductase (EC 1.8.1.9)
	Clos_0955	trxA	Thioredoxin
	Clos_0956	grdE	Glycine reductase component B (EC 1.21.4.2)
	Clos_0957	grdA	Glycine reductase complex protein A
	Clos_0958	grdB	Glycine reductase complex component B gamma subunit
	Clos_0959	grdC	Glycine reductase component C chain 1
	Clos_0960	grdD	Glycine reductase component C chain 2

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD