Regulon of Glycine in Clostridium sp. OhILAs
| Regulator type: | RNA regulatory element |
| Name: | Glycine |
| RFAM: | RF00504 |
| Regulation mode: | |
| Biological process: | Glycine metabolism |
| Effector: | Glycine |
| Regulog: | Glycine - Clostridiaceae |
| Under regulation: | |
| - Genes | 12 |
| - Operons | 2 |
Member of regulog collections
- By taxonomy - Clostridiaceae
- By RNA motif - Glycine
- By effector - Glycine
- By pathway - Glycine metabolism
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -468
Score: 49.4 Sequence: TGAAAATAACGAGAG...
Position: -370
Score: 57.9 Sequence: GATGAATCTCTGGAG...
Locus tag: Clos_0065
Name: gcvT Funciton: Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10)
Locus tag: Clos_0066
Name: gcvH Funciton: Glycine cleavage system H protein
Locus tag: Clos_0067
Name: gcvP1 Funciton: Glycine dehydrogenase [decarboxylating] (glycine cleavage system P1 protein) (EC 1.4.4.2)
Locus tag: Clos_0068
Name: gcvP2 Funciton: Glycine dehydrogenase [decarboxylating] (glycine cleavage system P2 protein) (EC 1.4.4.2) |
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gcvT
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Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10)
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gcvH
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Glycine cleavage system H protein
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gcvP1
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Glycine dehydrogenase [decarboxylating] (glycine cleavage system P1 protein) (EC 1.4.4.2)
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gcvP2
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Glycine dehydrogenase [decarboxylating] (glycine cleavage system P2 protein) (EC 1.4.4.2)
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Position: -298
Score: 52.6 Sequence: AGAAGAGTGCGGGAG...
Position: -194
Score: 40.5 Sequence: GACGGTACTCTGAAA...
Locus tag: Clos_0953
Name: grdX Funciton: putative glycine reductase complex component
Locus tag: Clos_0954
Name: trxB Funciton: Thioredoxin reductase (EC 1.8.1.9)
Locus tag: Clos_0955
Name: trxA Funciton: Thioredoxin
Locus tag: Clos_0956
Name: grdE Funciton: Glycine reductase component B (EC 1.21.4.2)
Locus tag: Clos_0957
Name: grdA Funciton: Glycine reductase complex protein A
Locus tag: Clos_0958
Name: grdB Funciton: Glycine reductase complex component B gamma subunit
Locus tag: Clos_0959
Name: grdC Funciton: Glycine reductase component C chain 1
Locus tag: Clos_0960
Name: grdD Funciton: Glycine reductase component C chain 2 |
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grdX
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putative glycine reductase complex component
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trxB
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Thioredoxin reductase (EC 1.8.1.9)
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trxA
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Thioredoxin
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grdE
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Glycine reductase component B (EC 1.21.4.2)
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grdA
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Glycine reductase complex protein A
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grdB
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Glycine reductase complex component B gamma subunit
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grdC
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Glycine reductase component C chain 1
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grdD
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Glycine reductase component C chain 2
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
|
Regulatory Sites | [ FASTA format ] | DOWNLOAD |