Regulon of Glycine in Clostridium scindens ATCC 35704
| Regulator type: | RNA regulatory element |
| Name: | Glycine |
| RFAM: | RF00504 |
| Regulation mode: | |
| Biological process: | Glycine metabolism |
| Effector: | Glycine |
| Regulog: | Glycine - Clostridiaceae |
| Under regulation: | |
| - Genes | 11 |
| - Operons | 2 |
Member of regulog collections
- By taxonomy - Clostridiaceae
- By RNA motif - Glycine
- By effector - Glycine
- By pathway - Glycine metabolism
| Locus Tag | Name | Function | |
|---|---|---|---|
|
Position: -198
Score: 30.2 Sequence: GAAGTAGCGAGGAAG...
Position: -91
Score: 48.5 Sequence: GATGGGACTCTGGAA...
Locus tag: CLOSCI_00442
Name: potE Funciton: Amino acid permease family protein |
|||
|
potE
|
Amino acid permease family protein
|
||
|
Position: -205
Score: 58.5 Sequence: ATGATGTTTCTCAAG...
Locus tag: CLOSCI_00776
Name: grdX Funciton: putative glycine reductase complex component
Locus tag: CLOSCI_00775
Name: grdE Funciton: Glycine reductase component B (EC 1.21.4.2)
Locus tag: CLOSCI_00774
Name: grdB Funciton: Glycine reductase complex component B gamma subunit
Locus tag: CLOSCI_00773
Name: grdB Funciton: Glycine reductase complex component B gamma subunit
Locus tag: CLOSCI_00772
Name: trxB Funciton: Thioredoxin reductase (EC 1.8.1.9)
Locus tag: CLOSCI_00771
Name: trxA Funciton: Thioredoxin
Locus tag: CLOSCI_00770
Name: grdA Funciton: Glycine reductase complex protein A
Locus tag: CLOSCI_00769
Name: grdA Funciton: Glycine reductase complex protein A
Locus tag: CLOSCI_00768
Name: grdC Funciton: Glycine reductase component C chain 1
Locus tag: CLOSCI_00767
Name: grdD Funciton: Glycine reductase component C chain 2 |
|||
|
grdX
|
putative glycine reductase complex component
|
||
|
grdE
|
Glycine reductase component B (EC 1.21.4.2)
|
||
|
grdB
|
Glycine reductase complex component B gamma subunit
|
||
|
grdB
|
Glycine reductase complex component B gamma subunit
|
||
|
trxB
|
Thioredoxin reductase (EC 1.8.1.9)
|
||
|
trxA
|
Thioredoxin
|
||
|
grdA
|
Glycine reductase complex protein A
|
||
|
grdA
|
Glycine reductase complex protein A
|
||
|
grdC
|
Glycine reductase component C chain 1
|
||
|
grdD
|
Glycine reductase component C chain 2
|
||
|
Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
|
Regulatory Sites | [ FASTA format ] | DOWNLOAD |