Regulog ModE - Desulfuromonadales
| Regulator type: | Transcription factor |
| Regulator family: | ModE |
| Regulation mode: | repressor (activator) |
| Biological process: | Molybdenum homeostasis |
| Effector: | Molybdate |
| Phylum: | Proteobacteria/delta |
| Visualization: | |
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Allows to visualize regulog content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Desulfuromonadales
- By trascription factor - ModE
- By TF family - ModE
- By effector - Molybdate
- By pathway - Molybdenum homeostasis
| Genome | Genes | Operons |
|---|---|---|
| Geobacter metallireducens GS-15 | ||
| Geobacter sulfurreducens PCA | 4 | 1 |
| Geobacter uraniumreducens Rf4 | 1 | 1 |
| Geobacter sp. FRC-32 | ||
| Geobacter sp. M21 | 1 | 1 |
| Geobacter lovleyi SZ | 6 | 1 |
| Pelobacter propionicus DSM 2379 | 5 | 2 |
| Pelobacter carbinolicus str. DSM 2380 | 8 | 3 |
| Desulfuromonas acetoxidans DSM 684 | 4 | 1 |
| Genes | Function | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| CRON 1. | ||||||||||
| omp_mod |
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Pelobacter propionicus DSM 2379 Site: position = -107 score = 5.65357 sequence = CATCGTTATTACTAATACTATATAACTACG Gene: Ppro_1541: predicted TonB-dependent outer memberane transporter for molybdate |
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Pelobacter carbinolicus str. DSM 2380 Site: position = -128 score = 5.40921 sequence = CTTCGCTATATTGCGGCGATGATAACGATT Gene: Pcar_2397: predicted TonB-dependent outer memberane transporter for molybdate |
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Desulfuromonas acetoxidans DSM 684 Site: position = -86 score = 5.67411 sequence = TTGCGTTGTATAGCGTGGCATATAGCGTAA Gene: Dace_2070: predicted TonB-dependent outer memberane transporter for molybdate |
predicted TonB-dependent outer memberane transporter for molybdate |
| Dace2069 |
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Gene: Ppro_1540: Duplicated ATPase component Dace2069 of energizing module of predicted ECF transporter |
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Pelobacter carbinolicus str. DSM 2380 Site: position = -107 score = 5.26048 sequence = GTTCGCTATATTCCGCGATTAACAACGTAT Gene: Pcar_2396: Duplicated ATPase component Dace2069 of energizing module of predicted ECF transporter |
Gene: Dace_2069: Duplicated ATPase component Dace2069 of energizing module of predicted ECF transporter |
Duplicated ATPase component Dace2069 of energizing module of predicted ECF transporter |
| Dace_2068 |
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Gene: Ppro_1539: Transmembrane component Dace_2068 of energizing module of predicted ECF transporter |
Gene: Pcar_2395: Transmembrane component Dace_2068 of energizing module of predicted ECF transporter |
Gene: Dace_2068: Transmembrane component Dace_2068 of energizing module of predicted ECF transporter |
Transmembrane component Dace_2068 of energizing module of predicted ECF transporter |
| Dace_2067 |
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Gene: Ppro_1538: Core component Dace_2067 of predicted ECF transporter |
Gene: Pcar_2394: Core component Dace_2067 of predicted ECF transporter |
Gene: Dace_2067: Core component Dace_2067 of predicted ECF transporter |
Core component Dace_2067 of predicted ECF transporter |
| CRON 2. | ||||||||||
| modE |
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Geobacter sp. M21 Site: position = -136 score = 5.19866 sequence = TTTCTCCATATAGGTTGTGCTATAACGATG Gene: GM21_2529: Molybdate-responsive transcriptional regulator ModE |
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Geobacter lovleyi SZ Site: position = -97 score = 5.70744 sequence = AAGCGTTATTTAGATCTATACATAACGTCA Gene: Glov_0447: Molybdate-responsive transcriptional regulator ModE |
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Molybdate-responsive transcriptional regulator ModE |
| modD |
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Geobacter sulfurreducens PCA Site: position = -160 score = 5.75024 sequence = TATCGTTATGTCATGAAGGTTATAGCGTTT Gene: GSU2963: Molybdenum transport system protein ModD |
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Gene: Glov_0448: Molybdenum transport system protein ModD |
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Gene: Dace_2604: Molybdenum transport system protein ModD |
Molybdenum transport system protein ModD |
| modA |
Gene: Gmet_0512: Molybdenum ABC transporter, periplasmic molybdenum-binding protein ModA (TC 3.A.1.8.1) |
Gene: GSU2962: Molybdenum ABC transporter, periplasmic molybdenum-binding protein ModA (TC 3.A.1.8.1) |
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Geobacter uraniumreducens Rf4 Site: position = -261 score = 5.36294 sequence = ATGCGTTATAATGTGCAAACTATAACGCTT Gene: Gura_3323: Molybdenum ABC transporter, periplasmic molybdenum-binding protein ModA (TC 3.A.1.8.1) |
Gene: Geob_3689: Molybdenum ABC transporter, periplasmic molybdenum-binding protein ModA (TC 3.A.1.8.1) |
2
Geobacter sp. M21 Gene: GM21_1616: Molybdenum ABC transporter, periplasmic molybdenum-binding protein ModA (TC 3.A.1.8.1) Gene: GM21_4076: Molybdenum ABC transporter, periplasmic molybdenum-binding protein ModA (TC 3.A.1.8.1) |
2
Geobacter lovleyi SZ Gene: Glov_0449: Molybdenum ABC transporter, periplasmic molybdenum-binding protein ModA (TC 3.A.1.8.1) Gene: Glov_0450: Molybdenum ABC transporter, periplasmic molybdenum-binding protein ModA (TC 3.A.1.8.1) |
*2
Pelobacter propionicus DSM 2379 Site: position = -104 score = 5.11846 sequence = GGTCGCTATATATCAAAAAACACTGCGCTC Gene: Ppro_1963: Molybdenum ABC transporter, periplasmic molybdenum-binding protein ModA (TC 3.A.1.8.1) Gene: Ppro_1459: Molybdenum ABC transporter, periplasmic molybdenum-binding protein ModA (TC 3.A.1.8.1) |
*3
Pelobacter carbinolicus str. DSM 2380 Gene: Pcar_0775: Molybdenum ABC transporter, periplasmic molybdenum-binding protein ModA (TC 3.A.1.8.1) Site: position = -115 score = 5.17165 sequence = ATTCGTTATATTTTCCCGGAGATAGCGCCC Gene: Pcar_2087: Molybdenum ABC transporter, periplasmic molybdenum-binding protein ModA (TC 3.A.1.8.1) Gene: Pcar_2084: Molybdenum ABC transporter, periplasmic molybdenum-binding protein ModA (TC 3.A.1.8.1) |
2
Desulfuromonas acetoxidans DSM 684 Gene: Dace_1673: Molybdenum ABC transporter, periplasmic molybdenum-binding protein ModA (TC 3.A.1.8.1) Gene: Dace_0994: Molybdenum ABC transporter, periplasmic molybdenum-binding protein ModA (TC 3.A.1.8.1) |
Molybdenum ABC transporter, periplasmic molybdenum-binding protein ModA (TC 3.A.1.8.1) |
| modB |
Gene: Gmet_0513: Molybdenum transport system permease protein ModB (TC 3.A.1.8.1) |
Gene: GSU2961: Molybdenum transport system permease protein ModB (TC 3.A.1.8.1) |
Gene: Gura_3322: Molybdenum transport system permease protein ModB (TC 3.A.1.8.1) |
Gene: Geob_3688: Molybdenum transport system permease protein ModB (TC 3.A.1.8.1) |
Gene: GM21_1617: Molybdenum transport system permease protein ModB (TC 3.A.1.8.1) |
Gene: Glov_0451: Molybdenum transport system permease protein ModB (TC 3.A.1.8.1) |
Gene: Ppro_1458: Molybdenum transport system permease protein ModB (TC 3.A.1.8.1) |
4
Pelobacter carbinolicus str. DSM 2380 Gene: Pcar_0776: Molybdenum transport system permease protein ModB (TC 3.A.1.8.1) Gene: Pcar_2108: Molybdenum transport system permease protein ModB (TC 3.A.1.8.1) Gene: Pcar_2086: Molybdenum transport system permease protein ModB (TC 3.A.1.8.1) Gene: Pcar_0230: Molybdenum transport system permease protein ModB (TC 3.A.1.8.1) |
Gene: Dace_1101: Molybdenum transport system permease protein ModB (TC 3.A.1.8.1) |
Molybdenum transport system permease protein ModB (TC 3.A.1.8.1) |
| modC |
Gene: Gmet_0514: Molybdenum transport ATP-binding protein ModC (TC 3.A.1.8.1) |
Gene: GSU2960: Molybdenum transport ATP-binding protein ModC (TC 3.A.1.8.1) |
Gene: Gura_3321: Molybdenum transport ATP-binding protein ModC (TC 3.A.1.8.1) |
Gene: Geob_3687: Molybdenum transport ATP-binding protein ModC (TC 3.A.1.8.1) |
Gene: GM21_1618: Molybdenum transport ATP-binding protein ModC (TC 3.A.1.8.1) |
Gene: Glov_0452: Molybdenum transport ATP-binding protein ModC (TC 3.A.1.8.1) |
Gene: Ppro_1457: Molybdenum transport ATP-binding protein ModC (TC 3.A.1.8.1) |
4
Pelobacter carbinolicus str. DSM 2380 Gene: Pcar_0777: Molybdenum transport ATP-binding protein ModC (TC 3.A.1.8.1) Gene: Pcar_2109: Molybdenum transport ATP-binding protein ModC (TC 3.A.1.8.1) Gene: Pcar_2085: Molybdenum transport ATP-binding protein ModC (TC 3.A.1.8.1) Gene: Pcar_0231: Molybdenum transport ATP-binding protein ModC (TC 3.A.1.8.1) |
Gene: Dace_1100: Molybdenum transport ATP-binding protein ModC (TC 3.A.1.8.1) |
Molybdenum transport ATP-binding protein ModC (TC 3.A.1.8.1) |
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |