Regulons of Mycobacterium avium 104
|
Allows to visualize regulome content in the context of metabolic pathways |
|
| Type |
Regulator |
Effector |
Pathway |
Operons |
Sites |
| TF |
AcnR |
Citrate |
Tricarboxylic acid cycle |
2 |
2 |
| TF |
ArgR |
Arginine |
Arginine biosynthesis |
1 |
1 |
| TF |
DosR |
Oxygen; Carbon monoxide; Nitric oxide |
Dormancy |
17 |
13 |
| TF |
HrcA |
Heat shock |
Heat shock response |
3 |
4 |
| TF |
HspR |
Heat shock |
Heat shock response |
3 |
4 |
| TF |
LexA |
DNA damage |
SOS response |
9 |
10 |
| TF |
LtbR |
|
Leucine biosynthesis |
2 |
4 |
| TF |
MntR |
Manganese ion, (Mn2+) |
Manganese homeostasis |
1 |
1 |
| TF |
NrdR |
Deoxyribonucleotides |
Deoxyribonucleotide biosynthesis |
2 |
5 |
| TF |
NrtR |
Adenosine diphosphate ribose |
NAD biosynthesis |
2 |
2 |
| TF |
PdxW |
|
Pyridoxine/pyridoxal homeostasis |
2 |
2 |
| TF |
Znr |
Zinc ion, (Zn2+) |
Zinc homeostasis |
1 |
1 |
| TF |
Zur |
Zinc ion, (Zn2+) |
Zinc homeostasis |
8 |
10 |
| RNA |
Cobalamin |
Adenosylcobalamin |
Cobalamin biosynthesis |
5 |
3 |
| RNA |
Glycine |
Glycine |
Glycine metabolism |
2 |
2 |
| RNA |
PyrR |
PyrR |
Pyrimidine metabolism |
1 |
1 |
| RNA |
SAH_riboswitch |
S-adenosylhomocysteine |
Methionine metabolism |
1 |
1 |
| RNA |
SAM-IV |
S-adenosylmethionine |
Sulfur metabolism |
1 |
1 |
| RNA |
TPP |
Thiamine pyrophosphate |
Thiamine biosynthesis |
2 |
2 |
| RNA |
ydaO-yuaA |
|
Osmotic stress response; Cell wall metabolism |
1 |
1 |
| RNA |
ykkC-yxkD |
|
Multidrug resistance |
1 |
1 |
| RNA |
ykoK |
Magnesium ion, (Mg2+) |
Magnesium homeostasis |
3 |
3 |
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Regulated Genes
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