Regulon of LexA in Mycobacterium avium 104
| Regulator type: | Transcription factor |
| TF locus tag: | MAV_3614 |
| Regulator family: | LexA |
| Regulation mode: | repressor |
| Biological process: | SOS response |
| Effector: | DNA damage |
| Regulog: | LexA - Mycobacteriaceae |
| Statistics of regulated genes: | |
| - Genes | 13 |
| - Operons | 9 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By trascription factor - LexA
- By taxonomy - Mycobacteriaceae
- By TF family - LexA
- By effector - DNA damage
- By pathway - SOS response
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -29
Score: 5.5 Sequence: TCGAACATCAGTTCGA
Locus tag: MAV_4335
Name: dnaE2 Funciton: DNA polymerase III alpha subunit (EC 2.7.7.7) |
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dnaE2
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DNA polymerase III alpha subunit (EC 2.7.7.7)
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Position: -23
Score: 5.9 Sequence: TCGAACACGTGTTCGA
Locus tag: MAV_3980
Name: Rv3074 Funciton: Conserved hypothetical protein |
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Rv3074
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Conserved hypothetical protein
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Position: -29
Score: 5.4 Sequence: TCGAACGGATGTGCGA
Locus tag: MAV_1124
Name: alkB Funciton: DNA repair system specific for alkylated DNA |
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alkB
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DNA repair system specific for alkylated DNA
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Position: -25
Score: 5.4 Sequence: TCGAACTGGTGTTCGA
Locus tag: MAV_3456
Name: splB Funciton: DNA repair photolyase |
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splB
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DNA repair photolyase
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Position: -8
Score: 5.7 Sequence: TCGAACATATGTGCGA
Locus tag: MAV_4456
Name: Rv0336 Funciton: Conserved hypothetical protein |
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Rv0336
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Conserved hypothetical protein
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Position: -33
Score: 5.4 Sequence: TCGAACAGCTGTTCTA
Locus tag: MAV_3475
Name: ruvC Funciton: Crossover junction endodeoxyribonuclease RuvC (EC 3.1.22.4)
Locus tag: MAV_3474
Name: ruvA Funciton: Holliday junction DNA helicase RuvA
Locus tag: MAV_3473
Name: ruvB Funciton: Holliday junction DNA helicase RuvB |
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ruvC
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Crossover junction endodeoxyribonuclease RuvC (EC 3.1.22.4)
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ruvA
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Holliday junction DNA helicase RuvA
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ruvB
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Holliday junction DNA helicase RuvB
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Position: -287
Score: 5 Sequence: TCGCTCGTGTGTTCGA
Position: -48
Score: 5.6 Sequence: TCGAACACATGTTTGA
Locus tag: MAV_3614
Name: lexA Funciton: SOS-response repressor and protease LexA (EC 3.4.21.88) |
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lexA
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SOS-response repressor and protease LexA (EC 3.4.21.88)
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Position: -123
Score: 5.4 Sequence: TCGAACACCTGTTCGG
Locus tag: MAV_3627
Name: recA Funciton: Recombinase A
Locus tag: MAV_3626
Name: recX Funciton: Regulatory protein RecX |
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recA
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Recombinase A
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recX
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Regulatory protein RecX
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Position: -52
Score: 5.7 Sequence: TCGAACATGCGTTCGA
Locus tag: MAV_4346
Name: Rv3395c Funciton: Recombinase-like hypothetical protein
Locus tag: MAV_4344
Name: COG0389 Funciton: DNA polymerase-like protein PA0670 |
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Rv3395c
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Recombinase-like hypothetical protein
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COG0389
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DNA polymerase-like protein PA0670
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |