Regulons of Tolumonas auensis DSM 9187
|
Allows to visualize regulome content in the context of metabolic pathways |
|
| Type |
Regulator |
Effector |
Pathway |
Operons |
Sites |
| TF |
ArgR |
Arginine |
Arginine degradation; Arginine biosynthesis |
6 |
10 |
| TF |
BirA |
Biotin |
Biotin biosynthesis |
2 |
2 |
| TF |
CadR-PbrR |
Lead ion, (Pb2+); Cadmium, ion (Cd2+) |
Lead resistance; Cadmium resistance |
1 |
1 |
| TF |
CueR |
Copper ion, (Cu+) |
Copper resistance |
2 |
2 |
| TF |
FruR |
Fructose-1-phosphate; Fructose-1,6-diphosphate |
Fructose utilization |
2 |
2 |
| TF |
Fur |
Iron ion, (Fe2+) |
Iron homeostasis |
9 |
10 |
| TF |
GntR |
Gluconate |
Gluconate utilization |
3 |
4 |
| TF |
HexR |
2-keto-3-deoxy-6-phosphogluconate |
Central carbohydrate metabolism |
16 |
6 |
| TF |
IscR |
Iron-sulfur cluster redox state |
Iron-sulfur cluster biogenesis |
2 |
2 |
| TF |
LexA |
DNA damage |
SOS response |
11 |
10 |
| TF |
MetJ |
S-adenosylmethionine |
Methionine metabolism; Methionine biosynthesis |
10 |
15 |
| TF |
MetR |
Homocysteine |
Methionine biosynthesis |
2 |
2 |
| TF |
ModE |
Molybdate |
Molybdenum homeostasis |
3 |
2 |
| TF |
NagC |
N-acetylglucosamine-6-phosphate |
N-acetylglucosamine utilization |
3 |
2 |
| TF |
NrdR |
Deoxyribonucleotides |
Deoxyribonucleotide biosynthesis |
3 |
4 |
| TF |
NrtR |
Adenosine diphosphate ribose |
NAD biosynthesis |
2 |
2 |
| TF |
NtrC |
Phosphorylated NtrB, signal histidine kinase |
Nitrogen assimilation |
4 |
5 |
| TF |
PdhR |
Pyruvate |
Pyruvate metabolism |
1 |
1 |
| TF |
RbsR |
Ribose |
Ribose utilization |
2 |
1 |
| TF |
RhaS |
Rhamnose |
Rhamnose utilization |
4 |
4 |
| TF |
ScrR |
Sucrose-6-phosphate |
Sucrose utilization |
2 |
2 |
| TF |
Tola_2572 |
|
|
2 |
4 |
| TF |
Tola_2750 |
|
Metabolite transport |
2 |
4 |
| TF |
TreR |
Trehalose-6-phosphate |
Trehalose utilization |
2 |
2 |
| TF |
TyrR |
Tyrosine; Phenylalanine |
Aromatic amino acid metabolism |
3 |
2 |
| TF |
UxuR |
Glucuronate |
Glucuronate utilization |
4 |
6 |
| TF |
Zur |
Zinc ion, (Zn2+) |
Zinc homeostasis |
2 |
2 |
| RNA |
FMN |
Flavin mononucleotide |
Riboflavin biosynthesis |
1 |
1 |
| RNA |
MOCO_RNA_motif |
Molybdenum |
Molybdopterin biosynthesis |
1 |
1 |
| RNA |
TPP |
Thiamine pyrophosphate |
Thiamine biosynthesis |
3 |
2 |
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