Regulon of RhaS in Tolumonas auensis DSM 9187
| Regulator type: | Transcription factor |
| TF locus tag: | Tola_1044 |
| Regulator family: | AraC |
| Regulation mode: | activator |
| Biological process: | Rhamnose utilization |
| Effector: | Rhamnose |
| Regulog: | RhaS - Psychromonadaceae/Aeromonadales |
| Statistics of regulated genes: | |
| - Genes | 8 |
| - Operons | 4 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By TF family - AraC
- By effector - Rhamnose
- By pathway - Rhamnose utilization
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -106
Score: 9.1 Sequence: TTCTTGGTTTTTATGCCA-(15)-TGGCATAGGAAAAAAGGT
Locus tag: Tola_1043
Name: rhaB Funciton: Rhamnulokinase (EC 2.7.1.5)
Locus tag: Tola_1042
Name: rhaA Funciton: L-rhamnose isomerase (EC 5.3.1.14)
Locus tag: Tola_1041
Name: rhaT Funciton: L-rhamnose:proton symporter
Locus tag: Tola_1040
Name: rhaM Funciton: L-rhamnose mutarotase |
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rhaB
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Rhamnulokinase (EC 2.7.1.5)
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rhaA
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L-rhamnose isomerase (EC 5.3.1.14)
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rhaT
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L-rhamnose:proton symporter
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rhaM
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L-rhamnose mutarotase
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Position: -158
Score: 9 Sequence: TCCTTGGAAATACTGCCA-(15)-TGGCCAATAGCTGAAGGT
Locus tag: Tola_1034
Name: rhaD Funciton: Rhamnulose-1-phosphate aldolase (EC 4.1.2.19) |
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rhaD
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Rhamnulose-1-phosphate aldolase (EC 4.1.2.19)
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Position: -111
Score: 7.4 Sequence: TTCTTGAGAAAAATGCCA-(15)-TGGCAGATTAATTAAGGT
Locus tag: Tola_1045
Name: rhaZ Funciton: L-lactaldehyde reductase |
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rhaZ
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L-lactaldehyde reductase
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Position: -154
Score: 7.5 Sequence: ATCTCCCTGAAAACGCCA-(15)-TGGCATAGAGACGAAAGT
Locus tag: Tola_1038
Name: Tola_1038 Funciton: Putative rhamnoside transporter
Locus tag: Tola_1037
Name: rhmA Funciton: alpha-L-rhamnosidase |
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Tola_1038
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Putative rhamnoside transporter
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rhmA
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alpha-L-rhamnosidase
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
|
Regulatory Sites | [ FASTA format ] | DOWNLOAD |