Regulons of Synechococcus sp. JA-3-3Ab

Allows to visualize regulome content in the context of metabolic pathways



Type	Regulator	Effector	Pathway	Operons	Sites
TF	ArsR	Arsenite	Arsenic resistance	2	1
TF	CcmR		Carbon dioxide fixation	7	3
TF	Crp	Cyclic 3',5'-AMP		17	3
TF	Fur	Iron ion, (Fe2+)	Iron homeostasis	21	3
TF	HrcA	Heat shock	Heat shock response	3	2
TF	LexA	DNA damage	SOS response	3	1
TF	NtcA	2-oxoglutarate	Nitrogen assimilation	22	10
TF	NtcB	Nitrite	Nitrogen assimilation	5	2
TF	PedR	Trx, thioredoxin protein	Photosynthesis; Carbon fixation	6	2
TF	SphR	Inorganic phosphate	Phosphate metabolism	21	4
TF	SufR	Iron-sulfur cluster redox state	Iron-sulfur cluster biogenesis	4	2
TF	Zur	Zinc ion, (Zn2+)	Zinc homeostasis	6	1
RNA	Cobalamin	Adenosylcobalamin	Cobalamin biosynthesis	7	3
RNA	L10_leader		Ribosome biogenesis	1	1
RNA	L21_leader		Ribosome biogenesis	1	1
RNA	SAM	S-adenosylmethionine	Methionine biosynthesis	1	1
RNA	TPP	Thiamine pyrophosphate	Thiamine biosynthesis	1	1
RNA	glnA	L-glutamine	Nitrogen assimilation	1	1
RNA	yybP-ykoY			2	2

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Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --