Regulon of NtcB in Synechococcus sp. JA-3-3Ab

Properties
Regulator type:	Transcription factor
TF locus tag:	CYA_0984
Regulator family:	LysR
Regulation mode:	activator (repressor)
Biological process:	Nitrogen assimilation
Effector:	Nitrite
Regulog:	NtcB - Cyanobacteria
Statistics of regulated genes:
- Genes	7
- Operons	2
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 44 sites [see more]

Member of regulog collections

By taxonomy - Cyanobacteria
By TF family - LysR
By effector - Nitrite
By pathway - Nitrogen assimilation

Regulated operons
	Locus Tag	Name	Function
Position: -101 Score: 4.4 Sequence: ATGACAAAACTGCAT Locus tag: CYA_0612 Name: nirA Funciton: ferredoxin--nitrite reductase Locus tag: CYA_0613 Name: nrtA Funciton: nitrate/nitrite ABC transport system, substrate-binding protein Locus tag: CYA_0614 Name: nrtB Funciton: nitrate/nitrite ABC transport system, permease protein Locus tag: CYA_0615 Name: nrtC Funciton: nitrate/nitrite ABC transport system, ATP-binding protein Locus tag: CYA_0616 Name: nrtD Funciton: nitrate/nitrite ABC transport system, ATP-binding protein
	CYA_0612	nirA	ferredoxin--nitrite reductase
	CYA_0613	nrtA	nitrate/nitrite ABC transport system, substrate-binding protein
	CYA_0614	nrtB	nitrate/nitrite ABC transport system, permease protein
	CYA_0615	nrtC	nitrate/nitrite ABC transport system, ATP-binding protein
	CYA_0616	nrtD	nitrate/nitrite ABC transport system, ATP-binding protein
Position: -26 Score: 4.2 Sequence: ATGCAGTTTATTCAA Locus tag: CYA_2428 Name: psbL Funciton: photosystem II protein L Locus tag: CYA_2427 Name: psbJ Funciton: photosystem II protein J
	CYA_2428	psbL	photosystem II protein L
	CYA_2427	psbJ	photosystem II protein J

Export
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