Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
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Profile of regulator NtcB in Cyanobacteria

Properties
Regulator family: LysR
Regulation mode: activator (repressor)
Biological process: Nitrogen assimilation
Effector: Nitrite
Regulog: NtcB - Cyanobacteria
Member of regulog collections
Transcription factor binding sites
Locus Tag Name Position Score Sequence
Synechococcus sp. PCC 7002
SYNPCC7002_A1827 nirA -162 4 ATGCGGCGATCGCAT
SYNPCC7002_A1632 ntcB -56 4.4 ATGCAGTAAACTCAT
SYNPCC7002_A0232 psbL -30 4.2 ATGCAGTTTATTCAA
SYNPCC7002_A2151 psbM -289 4.5 ATGCGGAACCTGCAT
SYNPCC7002_A1732 yrdC -51 4.8 ATGCAGCAATTGCAT
Synechocystis sp. PCC 6803
sll1450 nrtA -125 4.9 ATGCAGTAATCGCAT
slr0898 nirA -103 4.8 ATGCGTAAACTGCAT
slr0395 ntcB -187 4 ATGGATTCTTTTCAT
smr0007 psbL -30 4.3 ATGCAATTTATTCAA
Cyanothece sp. ATCC 51142
cce_1223 nirA -127 4.7 ATGCAAAAAATCCAT
cce_1223 nirA -105 4.1 ATGCAAAAAACGGAT
cce_0198 ntcB -125 3.6 AGACAAAAACTCCAT
cce_1304 psbL -31 4.2 ATGCAGTTTATTCAA
cce_0893 psbM -247 4.2 ATGTGGAACCTGCAT
cce_1062 yrdC -69 4.4 ATGCGTTTTTTGTAT
Cyanothece sp. PCC 8801
PCC8801_4396 nrtA -235 4.5 ATGCAAAAACCACAT
PCC8801_4396 nrtA -213 4 ATGCTTTTATTGCAA
PCC8801_2468 nirA -126 3.9 ATGCAAAATAATCAT
PCC8801_4145 psbL -30 4.3 ATGCAATTTATTCAA
PCC8801_2861 psbM -249 4.2 ATGCGGAACCTGTAT
Cyanothece sp. PCC 7425
Cyan7425_4573 nirA -174 4.5 ATGCAGGTTTGGCAT
Cyan7425_2230 psbJ -238 4.6 ATGCAGTTTATTCAT
Cyan7425_0859 psbM -220 3.9 ATGCGGCACCTGTAT
Microcystis aeruginosa NIES-843
MAE_18410 nirA -241 4.6 ATGCACTTACTGCAT
MAE_53960 narB -140 4 ATGCGCGATTTGCAT
MAE_33000 psbJ -193 4.2 ATGCAGTTTATTCAA
MAE_14800 nrtA -395 3.7 ATGCTTTTATGACAT
Nostoc sp. PCC 7120
all3333 nrtA -135 4.4 ATGCAATTTTTACAA
all0602 ntcB -31 3.9 ATGCCGTAAATGTAA
asr3847 psbL -41 4.2 ATGCAGTTTATTCAA
asl0883 psbM -257 4.3 ATGCGGTACTTGTAT
alr0607 nirA -562 4.8 ATGCAGAAAACGCAT
Trichodesmium erythraeum IMS101
Tery_1068 nirA -250 4.7 ATGTAATAAATGCAT
Tery_4333 ntcB -87 4.1 ATGAAATATTTATAT
Tery_3506 psbL -33 4.2 ATGCAGTTTATTCAA
Synechococcus elongatus PCC 7942
Synpcc7942_1240 nirA -109 4.3 TTGCAGAACATGCAT
Synpcc7942_1241 null -192 4.3 ATGCATGTTCTGCAA
Synpcc7942_1175 psbL -33 4 ATGCAATTCATTCAA
Synechococcus sp. JA-3-3Ab
CYA_0612 nirA -101 4.4 ATGACAAAACTGCAT
CYA_2428 psbL -26 4.2 ATGCAGTTTATTCAA
Gloeobacter violaceus PCC 7421
gvip111 psbL -36 3.9 ATGCAGTTTATCCAG
Thermosynechococcus elongatus BP-1
tlr1349 nirA -111 4.4 ATACAAAAACTGTAT
null ntcB -99 4.2 ATGGGAAAGTTGCAT
null psbL -33 4.2 ATGCAGTTTATCCAA
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