Regulon of NtcA in Synechococcus sp. JA-3-3Ab

Properties
Regulator type:	Transcription factor
TF locus tag:	CYA_1799
Regulator family:	CRP
Regulation mode:	activator
Biological process:	Nitrogen assimilation
Effector:	2-oxoglutarate
Regulog:	NtcA - Cyanobacteria
Statistics of regulated genes:
- Genes	16
- Operons	9
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 228 sites [see more]

Member of regulog collections

By taxonomy - Cyanobacteria
By TF family - CRP
By effector - 2-oxoglutarate
By pathway - Nitrogen assimilation

Regulated operons
	Locus Tag	Name	Function
Position: -66 Score: 3.6 Sequence: GCTATTATCAATTACA Locus tag: CYA_0030 Name: fur Funciton: Ferric uptake regulator, Fur family
	CYA_0030	fur	Ferric uptake regulator, Fur family
Position: -139 Score: 3.9 Sequence: GGTAAGATAAAATACA Position: -81 Score: 4.2 Sequence: CGTATCAAAGGCTACT Locus tag: CYA_0570 Name: SYNPCC7002_A2395 Funciton: hypothetical protein
	CYA_0570	SYNPCC7002_A2395	hypothetical protein
Position: -138 Score: 4.3 Sequence: CGTATCAGAAACTACA Locus tag: CYA_1363 Name: glnA Funciton: glutamine synthetase, type I
	CYA_1363	glnA	glutamine synthetase, type I
Position: -74 Score: 4.5 Sequence: TGTATCCGTTTTTACA Locus tag: CYA_1508 Name: glnB Funciton: nitrogen regulatory protein P-II
	CYA_1508	glnB	nitrogen regulatory protein P-II
Position: -72 Score: 3.9 Sequence: TGTAACTGCCAATACC Locus tag: CYA_0612 Name: nirA Funciton: Nitrite reductase, ferredoxin dependent Locus tag: CYA_0613 Name: nrtA Funciton: Nitrate/nitrite ABC transporter, substrate-binding protein Locus tag: CYA_0614 Name: nrtB Funciton: Nitrate/nitrite ABC transporter, permease protein Locus tag: CYA_0615 Name: nrtC Funciton: Nitrate/nitrite ABC transporter, ATP-binding protein 1 Locus tag: CYA_0616 Name: nrtD Funciton: Nitrate/nitrite ABC transporter, ATP-binding protein 2
	CYA_0612	nirA	Nitrite reductase, ferredoxin dependent
	CYA_0613	nrtA	Nitrate/nitrite ABC transporter, substrate-binding protein
	CYA_0614	nrtB	Nitrate/nitrite ABC transporter, permease protein
	CYA_0615	nrtC	Nitrate/nitrite ABC transporter, ATP-binding protein 1
	CYA_0616	nrtD	Nitrate/nitrite ABC transporter, ATP-binding protein 2
Position: -181 Score: 4.7 Sequence: TGTAGCTCCTGCTACA Locus tag: CYA_1799 Name: ntcA Funciton: Global nitrogen transcription regulator, Crp family
	CYA_1799	ntcA	Global nitrogen transcription regulator, Crp family
Position: -89 Score: 4.2 Sequence: TGTAACGGTGTTTACA Locus tag: CYA_0984 Name: ntcB Funciton: Nitrogen assimilation transcriptional activator, LysR family
	CYA_0984	ntcB	Nitrogen assimilation transcriptional activator, LysR family
Position: -248 Score: 3.9 Sequence: AGAAACAGAAGCTACA Locus tag: CYA_1920 Name: urtE Funciton: Urea ABC transporter, ATP-binding protein 2
	CYA_1920	urtE	Urea ABC transporter, ATP-binding protein 2
Position: -272 Score: 3.7 Sequence: GGTATCCCGCGATACA Locus tag: CYA_1924 Name: urtA Funciton: Urea ABC transporter, substrate-binding protein Locus tag: CYA_1923 Name: urtB Funciton: Urea ABC transporter, permease protein 1 Locus tag: CYA_1922 Name: urtC Funciton: Urea ABC transporter, permease protein 2 Locus tag: CYA_1921 Name: urtD Funciton: Urea ABC transporter, ATP-binding protein 1
	CYA_1924	urtA	Urea ABC transporter, substrate-binding protein
	CYA_1923	urtB	Urea ABC transporter, permease protein 1
	CYA_1922	urtC	Urea ABC transporter, permease protein 2
	CYA_1921	urtD	Urea ABC transporter, ATP-binding protein 1

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Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --

Regulon of NtcA in Synechococcus sp. JA-3-3Ab

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --