Regulon of PedR in Synechococcus sp. JA-3-3Ab
| Regulator type: | Transcription factor |
| TF locus tag: | CYA_2351 |
| Regulator family: | LuxR |
| Regulation mode: | repressor (activator) |
| Biological process: | Photosynthesis; Carbon fixation |
| Effector: | Trx, thioredoxin protein |
| Regulog: | PedR - Cyanobacteria |
| Statistics of regulated genes: | |
| - Genes | 3 |
| - Operons | 2 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Cyanobacteria
- By TF family - LuxR
- By effector - Trx, thioredoxin protein
- By pathway - Photosynthesis
- By pathway - Carbon fixation
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -109
Score: 3.5 Sequence: AACCATATTTTCTC
Locus tag: CYA_0085
Name: CYA_0085 Funciton: hypothetical protein
Locus tag: CYA_0084
Name: rpe Funciton: Ribulose-phosphate 3-epimerase |
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CYA_0085
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hypothetical protein
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rpe
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Ribulose-phosphate 3-epimerase
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Position: -18
Score: 4 Sequence: GAGTATTTATTCCC
Locus tag: CYA_0520
Name: ndhD Funciton: NADH dehydrogenase subunit |
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ndhD
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NADH dehydrogenase subunit
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |