Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Profile of regulator PedR in Cyanobacteria

Properties
Regulator family: LuxR
Regulation mode: repressor (activator)
Biological process: Photosynthesis; Carbon fixation
Effector: Trx, thioredoxin protein
Regulog: PedR - Cyanobacteria
Member of regulog collections
Transcription factor binding sites
Locus Tag Name Position Score Sequence
Cyanothece sp. ATCC 51142
cce_2950 slr1957 -166 4.5 AAGCATATCTACTT
cce_3522 ndhD -19 4.2 GAGTATTTATTCCT
cce_4534 chlN -365 4.9 AAGTAAGTTTACCT
cce_4720 pedR -29 4.7 AAGTAAATGTACTA
cce_4532 chlL -155 4.3 AAGCAATTTTTCTC
Cyanothece sp. PCC 7425
Cyan7425_3849 slr1957 -86 5.1 AAGTATTTATACCT
Cyan7425_0836 ndhD2 -110 4.2 AAGTAGGTTTACCC
Cyan7425_1996 rpe -14 3.9 GAGGAACTTTACCT
Cyan7425_0836 ndhD2 -8 4.4 AAGTATTTATGCTC
Cyan7425_0293 pedR -28 4.3 AAGTAATTGTACGG
Cyanothece sp. PCC 8801
PCC8801_3714 slr1957 -148 4.5 AAGCAAGATTACCT
PCC8801_4139 pedR -28 4.7 AAGTAAATGTACTA
PCC8801_1619 rpe -275 3.6 AAGCAGCTATTCTG
PCC8801_0791 chlL -42 4.2 AGGCAAATACACTT
PCC8801_0789 chlN -357 4.7 AAGCAACTTTACCT
Microcystis aeruginosa NIES-843
MAE_42210 ndhD2 -20 4.2 AGGTATTTTTTCTT
MAE_54580 pedR -28 4.7 AAGTAAATATACGA
MAE_16230 chlL -223 3.6 AAGTAAATGTATAA
MAE_53860 chlB -319 4.5 AAGCAAAATTACCG
Nostoc sp. PCC 7120
all2740 slr1957 -157 4.3 AAGCATGAATACTA
alr5050 ndhD2 -23 4.5 AAGTATTTTTGCTT
alr0348 ndhD -160 4.2 GAGTATTTATTCCT
alr0348 ndhD -119 4.1 GAGTATAAATTCCT
alr0348 ndhD -59 4.3 AAGTAACAATTCCT
alr0782 rpe -263 4.2 AAGCATCAATACCG
asl2551 pedR -194 4.5 AAGTATATTTAATT
asl2551 pedR -33 4.6 AAGTACATATACCA
alr3441 chlB -56 3.7 AAGCACTTATAGTC
all5076 chlN -7 3.7 AAGCAAAATGACCA
Prochlorococcus marinus str. MIT 9313
PMT0427 ndhD -155 4.2 GAGTAGATATACTC
PMT2014 pedR -366 3.7 AAGTAAATCTGATT
Synechococcus elongatus PCC 7942
Synpcc7942_2264 pedR -30 4.7 AAGTACAAATACTT
Synpcc7942_1439 ndhD -42 4.2 AAGCAAATCTGCTT
Synpcc7942_1439 ndhD -87 4.4 GAGTATTTTTACTC
Synechococcus sp. JA-3-3Ab
CYA_0520 ndhD -18 4 GAGTATTTATTCCC
CYA_0085 CYA_0085 -109 3.5 AACCATATTTTCTC
Synechococcus sp. PCC 7002
SYNPCC7002_A1219 slr1957 -217 5 AAGTAATTATACCC
SYNPCC7002_A0641 pedR -257 3.7 AAGAAAGTTTATCT
SYNPCC7002_A1973 ndhD -20 4.5 AAGTATTTTTTCCT
SYNPCC7002_A1792 sll0296 -63 4.1 AAGCATAAATTCCC
SYNPCC7002_A1652 chlB -14 4.6 GAGTAAAAATACCT
Synechocystis sp. PCC 6803
slr1957 slr1957 -18 4.8 AAGCATAAATACCT
slr1291 ndhD2 -20 4.3 AGGTATTTATTCTT
slr0750 chlN -242 3.5 AATTAAAATTAATC
slr0749 chlL -178 4 AAGTTATTTTATTT
slr0749 chlL -196 4.8 AAGTAACTATACCC
slr0772 chlB -182 3.4 AAGCATTAAGAATT
sll0296 sll0296 -349 4.8 GAGTAAATATACCT
sll0807 rpe -27 3.5 GAGTTGAAATACTT
ssl0564 pedR -28 4.8 GAGTAAATATACCT
Thermosynechococcus elongatus BP-1
null ndhD -64 4.4 AGGTATATATTCTT
null pedR -22 4.6 AAGTAATTATACGG
Trichodesmium erythraeum IMS101
Tery_3241 ndhD2 -20 4.1 AAGTATTTGTGCTC
Tery_2735 pedR -34 5.2 AAGCAAATATACTT
Tery_3241 ndhD2 -103 4.7 AAGTATATATATTT
Tery_3812 chlB -177 4.1 AGTTAAAAATACTT
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