Regulons of Oceanobacter sp. RED65

Allows to visualize regulome content in the context of metabolic pathways



Type	Regulator	Effector	Pathway	Operons	Sites
TF	BirA	Biotin	Biotin biosynthesis	2	1
TF	IscR	Iron-sulfur cluster redox state	Iron-sulfur cluster biogenesis	5	3
TF	LexA	DNA damage	SOS response	10	9
TF	MetR	Homocysteine	Methionine biosynthesis	3	5
TF	NrdR	Deoxyribonucleotides	Deoxyribonucleotide biosynthesis	1	2
TF	NtrC	Phosphorylated NtrB, signal histidine kinase	Nitrogen assimilation	5	6
TF	PrpR	2-methylcitrate	Methylcitrate utilization	2	2
TF	PsrA	Oleate	Fatty acid degradation	13	6
TF	RutR	Uracil	Pyrimidine utilization	5	4
TF	SahR	S-adenosylhomocysteine	Methionine metabolism	2	1
TF	Zur	Zinc ion, (Zn2+)	Zinc homeostasis	5	2
RNA	TPP	Thiamine pyrophosphate	Thiamine biosynthesis	2	2

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Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --