Regulons of Oceanobacter sp. RED65
|
Allows to visualize regulome content in the context of metabolic pathways |
|
| Type |
Regulator |
Effector |
Pathway |
Operons |
Sites |
| TF |
BirA |
Biotin |
Biotin biosynthesis |
2 |
1 |
| TF |
IscR |
Iron-sulfur cluster redox state |
Iron-sulfur cluster biogenesis |
5 |
3 |
| TF |
LexA |
DNA damage |
SOS response |
10 |
9 |
| TF |
MetR |
Homocysteine |
Methionine biosynthesis |
3 |
5 |
| TF |
NrdR |
Deoxyribonucleotides |
Deoxyribonucleotide biosynthesis |
1 |
2 |
| TF |
NtrC |
Phosphorylated NtrB, signal histidine kinase |
Nitrogen assimilation |
5 |
6 |
| TF |
PrpR |
2-methylcitrate |
Methylcitrate utilization |
2 |
2 |
| TF |
PsrA |
Oleate |
Fatty acid degradation |
13 |
6 |
| TF |
RutR |
Uracil |
Pyrimidine utilization |
5 |
4 |
| TF |
SahR |
S-adenosylhomocysteine |
Methionine metabolism |
2 |
1 |
| TF |
Zur |
Zinc ion, (Zn2+) |
Zinc homeostasis |
5 |
2 |
| RNA |
TPP |
Thiamine pyrophosphate |
Thiamine biosynthesis |
2 |
2 |
Export
|
Regulated Genes
|
[ Tab delimited format ]
|
DOWNLOAD
|
|
Regulatory Sites
|
[ FASTA format ]
|
DOWNLOAD
|
