Regulon of IscR in Oceanobacter sp. RED65
| Regulator type: | Transcription factor |
| TF locus tag: | RED65_06117 |
| Regulator family: | Rrf2 |
| Regulation mode: | activator (repressor) |
| Biological process: | Iron-sulfur cluster biogenesis |
| Effector: | Iron-sulfur cluster redox state |
| Regulog: | IscR - Oceanospirillales/Alteromonadales |
| Statistics of regulated genes: | |
| - Genes | 10 |
| - Operons | 3 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Oceanospirillales/Alteromonadales
- By trascription factor - IscR
- By TF family - Rrf2
- By effector - Iron-sulfur cluster redox state
- By pathway - Iron-sulfur cluster biogenesis
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -70
Score: 5.7 Sequence: TTAGTTGACTAGAATACTCGGGTTT
Locus tag: RED65_11832
Name: erpA Funciton: ErpA, essential respiratory protein A / probable iron binding protein from the HesB_IscA_SufA family |
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erpA
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ErpA, essential respiratory protein A / probable iron binding protein from the HesB_IscA_SufA family
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Position: -78
Score: 5.3 Sequence: ATACCCGAGTAAAAAACTAGGGATT
Locus tag: RED65_07139
Name: nfuA Funciton: NfuA Fe-S protein maturation |
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nfuA
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NfuA Fe-S protein maturation
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Position: -74
Score: 6.2 Sequence: AAAGTTGACTAAAATACTCGGGTTT
Locus tag: RED65_06117
Name: iscR Funciton: Iron-sulfur cluster regulator IscR
Locus tag: RED65_06112
Name: iscS Funciton: Cysteine desulfurase (EC 2.8.1.7), IscS subfamily
Locus tag: RED65_06107
Name: sufB Funciton: Iron-sulfur cluster assembly protein SufB
Locus tag: RED65_06102
Name: sufC Funciton: Iron-sulfur cluster assembly ATPase protein SufC
Locus tag: RED65_06097
Name: sufD Funciton: Iron-sulfur cluster assembly protein SufD
Locus tag: RED65_06092
Name: sufS Funciton: Cysteine desulfurase (EC 2.8.1.7), SufS subfamily
Locus tag: RED65_06087
Name: sufA Funciton: Iron binding protein SufA for iron-sulfur cluster assembly
Locus tag: RED65_06082
Name: sufT Funciton: Iron sulfur cluster assembly protein SufT |
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iscR
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Iron-sulfur cluster regulator IscR
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iscS
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Cysteine desulfurase (EC 2.8.1.7), IscS subfamily
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sufB
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Iron-sulfur cluster assembly protein SufB
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sufC
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Iron-sulfur cluster assembly ATPase protein SufC
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sufD
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Iron-sulfur cluster assembly protein SufD
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sufS
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Cysteine desulfurase (EC 2.8.1.7), SufS subfamily
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sufA
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Iron binding protein SufA for iron-sulfur cluster assembly
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sufT
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Iron sulfur cluster assembly protein SufT
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |