Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulon of LexA in Oceanobacter sp. RED65

Properties
Regulator type: Transcription factor
TF locus tag: RED65_00670
Regulator family: LexA
Regulation mode: repressor
Biological process: SOS response
Effector: DNA damage
Regulog: LexA - Oceanospirillales/Alteromonadales
Statistics of regulated genes:
- Genes 10
- Operons 7
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 91 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function

Position: -65
Score: 5.2
Sequence: TACTTTACATACATACAGCA
Position: -30
Score: 5.3
Sequence: CTCTGTATATAAAAACAGAT
Locus tag: RED65_00670
Name: lexA
Funciton: SOS-response repressor and protease LexA (EC 3.4.21.88)
lexA
SOS-response repressor and protease LexA (EC 3.4.21.88)

Position: -70
Score: 5.9
Sequence: TACTGTATAAATAAACATAT
Locus tag: RED65_13487
Name: recN
Funciton: DNA repair protein RecN
recN
DNA repair protein RecN

Position: -102
Score: 5.3
Sequence: TACTGGTTAAATTTACAGTG
Locus tag: RED65_07869
Name: recA
Funciton: Recombinase A
recA
Recombinase A

Position: -28
Score: 5.7
Sequence: CACTGTATGTTAATACAGTA
Locus tag: RED65_10319
Name: dinB
Funciton: DNA polymerase IV (EC 2.7.7.7)
dinB
DNA polymerase IV (EC 2.7.7.7)

Position: -38
Score: 6.6
Sequence: TACTGTATATATATACAGTA
Locus tag: RED65_01690
Name: imuA
Funciton: Predicted RecA/RadA recombinase
Locus tag: RED65_01685
Name: imuB
Funciton: DNA polymerase-like protein PA0670
Locus tag: RED65_01680
Name: dnaE2
Funciton: DNA polymerase III alpha subunit (EC 2.7.7.7)
imuA
Predicted RecA/RadA recombinase
imuB
DNA polymerase-like protein PA0670
dnaE2
DNA polymerase III alpha subunit (EC 2.7.7.7)

Position: -51
Score: 5.3
Sequence: CACTGATTAAATTTACAGTA
Locus tag: RED65_05144
Name: ruvA
Funciton: Holliday junction DNA helicase RuvA
Locus tag: RED65_05149
Name: ruvB
Funciton: Holliday junction DNA helicase RuvB
ruvA
Holliday junction DNA helicase RuvA
ruvB
Holliday junction DNA helicase RuvB

Position: -54
Score: 5.1
Sequence: CACTTTATAAATATACTGTA
Position: -41
Score: 6
Sequence: TACTGTATATAAATACAGCT
Locus tag: RED65_02924
Name: dnaQ
Funciton: DNA polymerase III epsilon subunit (EC 2.7.7.7)
dnaQ
DNA polymerase III epsilon subunit (EC 2.7.7.7)
Export
Regulated Genes [ Tab delimited format ] DOWNLOAD
Regulatory Sites [ FASTA format ] DOWNLOAD