Regulon of MetR in Oceanobacter sp. RED65

Properties
Regulator type:	Transcription factor
TF locus tag:	RED65_10519
Regulator family:	LysR
Regulation mode:	repressor (activator)
Biological process:	Methionine biosynthesis
Effector:	Homocysteine
Regulog:	MetR - Oceanospirillales/Alteromonadales
Statistics of regulated genes:
- Genes	5
- Operons	3
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 46 sites [see more]

Member of regulog collections

By taxonomy - Oceanospirillales/Alteromonadales
By trascription factor - MetR
By TF family - LysR
By effector - Homocysteine
By pathway - Methionine biosynthesis

Regulated operons
	Locus Tag	Name	Function
Position: -53 Score: 3.6 Sequence: ATGAATATTCCTAAT Position: -29 Score: 3.7 Sequence: CTGTATCTCATTCAT Locus tag: RED65_10519 Name: metR Funciton: Homocysteine-responsive transcriptional regulator of methionine metabolism, LysR family
	RED65_10519	metR	Homocysteine-responsive transcriptional regulator of methionine metabolism, LysR family
Position: -86 Score: 4.2 Sequence: ATGAGATAAAATCAA Position: -76 Score: 4.6 Sequence: ATCAATTTTTTTCAT Locus tag: RED65_13432 Name: PF08908 Funciton: Protein of unknown function DUF1852 Locus tag: RED65_13427 Name: metE2 Funciton: Methionine synthase II, vitamin-B12 independent (EC 2.1.1.14)
	RED65_13432	PF08908	Protein of unknown function DUF1852
	RED65_13427	metE2	Methionine synthase II, vitamin-B12 independent (EC 2.1.1.14)
Position: -106 Score: 4.4 Sequence: ATGAGTAGTATTCAA Locus tag: RED65_09029 Name: metH Funciton: 5-methyltetrahydrofolate--homocysteine methyltransferase (EC 2.1.1.13) Locus tag: RED65_09024 Name: metH Funciton: 5-methyltetrahydrofolate--homocysteine methyltransferase (EC 2.1.1.13)
	RED65_09029	metH	5-methyltetrahydrofolate--homocysteine methyltransferase (EC 2.1.1.13)
	RED65_09024	metH	5-methyltetrahydrofolate--homocysteine methyltransferase (EC 2.1.1.13)

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	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD