Profile of regulator MetR in Oceanospirillales/Alteromonadales
| Regulator family: | LysR |
| Regulation mode: | repressor (activator) |
| Biological process: | Methionine biosynthesis |
| Effector: | Homocysteine |
| Regulog: | MetR - Oceanospirillales/Alteromonadales |
Member of regulog collections
- By taxonomy - Oceanospirillales/Alteromonadales
- By trascription factor - MetR
- By TF family - LysR
- By effector - Homocysteine
- By pathway - Methionine biosynthesis
Transcription factor binding sites
| Locus Tag | Name | Position | Score | Sequence | |
|---|---|---|---|---|---|
| Hahella chejuensis KCTC 2396 | |||||
| HCH_01174 | metE | -91 | 4.6 | ATGAATTTATTTAAT | |
| HCH_01174 | metE | -70 | 4.5 | ATGAAATATTAACAT | |
| HCH_01175 | metR | -47 | 4.5 | ATGTTAATATTTCAT | |
| HCH_01175 | metR | -26 | 4.6 | ATTAAATAAATTCAT | |
| Marinobacter aqueolei | |||||
| Maqu_0809 | metE | -104 | 4.6 | GTGAATCTTTTTCAT | |
| Maqu_0809 | metE | -83 | 4.1 | GTGAAATAATACCAT | |
| Maqu_0810 | metR | -21 | 4.1 | ATGGTATTATTTCAC | |
| Maqu_0810 | metR | 0 | 4.6 | ATGAAAAAGATTCAC | |
| Marinobacter sp. ELB17 | |||||
| MELB17_19821 | metE | -67 | 4.9 | GTGAATAGAATTCAT | |
| MELB17_19821 | metE | -46 | 4.1 | GTGAAATAATACCAT | |
| MELB17_19816 | metR | -44 | 4.9 | ATGAATTCTATTCAC | |
| MELB17_19816 | metR | -65 | 4.1 | ATGGTATTATTTCAC | |
| Oceanobacter sp. RED65 | |||||
| RED65_09029 | metH | -106 | 4.4 | ATGAGTAGTATTCAA | |
| RED65_13432 | PF08908 | -86 | 4.2 | ATGAGATAAAATCAA | |
| RED65_13432 | PF08908 | -76 | 4.6 | ATCAATTTTTTTCAT | |
| RED65_10519 | metR | -29 | 3.7 | CTGTATCTCATTCAT | |
| RED65_10519 | metR | -53 | 3.6 | ATGAATATTCCTAAT | |
| Oceanospirillum sp. MED92 | |||||
| MED92_04362 | metH | -129 | 4.3 | ATGACCAATTTTCAT | |
| MED92_05643 | PF08908 | -188 | 4.4 | ATGAATAAATATAAT | |
| MED92_05643 | PF08908 | -167 | 4.7 | ATGAAAAGGTATCAT | |
| Marinomonas sp. MWYL1 | |||||
| Mmwyl1_0387 | PF08908 | -169 | 5.4 | ATGAATAATATTCAT | |
| Mmwyl1_0387 | PF08908 | -149 | 4 | TTAAAATAAATTCAT | |
| Mmwyl1_2283 | glyA | -95 | 4.8 | ATGATCTTTTTTCAT | |
| Saccharophagus degradans 2-40 | |||||
| Sde_0638 | metE | -62 | 4.2 | ATCAATTTTATTCAC | |
| Sde_0638 | metE | -93 | 5.2 | ATGATTAAAATTCAT | |
| Sde_0637 | metR | -13 | 5.2 | ATGAATTTTAATCAT | |
| Sde_0637 | metR | -44 | 4.2 | GTGAATAAAATTGAT | |
| Teredinibacter turnerae T7901 | |||||
| TERTU_4688 | metE | -81 | 4.5 | ATGAAATAATACCAT | |
| TERTU_4688 | metE | -102 | 5.4 | ATGAATTGTATTCAT | |
| TERTU_4689 | metR | 0 | 4.5 | ATGGTATTATTTCAT | |
| TERTU_4689 | metR | 21 | 5.4 | ATGAATACAATTCAT | |
| Cellvibrio japonicus Ueda107 | |||||
| CJA_2446 | metR | -84 | 4.7 | ATGAATTTAATTAAT | |
| CJA_2448 | metE | -138 | 4.7 | ATTAATTAAATTCAT | |
| CJA_2446 | metR | -115 | 4 | ATGAATCAAACTGAT | |
| Chromohalobacter salexigens DSM 3043 | |||||
| Csal_0672 | metE | -163 | 4.3 | ATGAGTGCCGTTCAT | |
| Csal_0671 | metR | -20 | 4.3 | ATGAACGGCACTCAT | |
| Csal_1563 | metE2 | -41 | 4.8 | ATGAACGTCATTCAT | |
| Csal_0671 | metR | -139 | 3.9 | ATGAGTGACTTTCAG | |
| Reinekea sp. MED297 | |||||
| MED297_11745 | metE | -102 | 5 | ATGAATTTTACTCAT | |
| MED297_11745 | metE | -81 | 4.6 | ATGAATTAATACCAT | |
| MED297_11750 | metR | -84 | 4.6 | ATGGTATTAATTCAT | |
| MED297_11750 | metR | -63 | 5 | ATGAGTAAAATTCAT | |
| Alcanivorax borkumensis SK2 | |||||
| ABO_0861 | metE | -230 | 4.4 | ATGAATGCCTTTCCT | |
| ABO_0861 | metE | -147 | 4.4 | TTGAGAAAAATTCAT | |
| ABO_0862 | metR | -96 | 4.4 | ATGAATTTTTCTCAA | |
| ABO_0862 | metR | -13 | 4.4 | AGGAAAGGCATTCAT | |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |