Regulons of Thermosynechococcus elongatus BP-1

Allows to visualize regulome content in the context of metabolic pathways



Type	Regulator	Effector	Pathway	Operons	Sites
TF	CcmR		Carbon dioxide fixation	7	4
TF	Crp	Cyclic 3',5'-AMP		18	5
TF	Fur	Iron ion, (Fe2+)	Iron homeostasis	24	6
TF	HrcA	Heat shock	Heat shock response	2	1
TF	NrdR	Deoxyribonucleotides	Deoxyribonucleotide biosynthesis	1	1
TF	NrtR	Adenosine diphosphate ribose	NAD biosynthesis	2	2
TF	NtcA	2-oxoglutarate	Nitrogen assimilation	26	14
TF	NtcB	Nitrite	Nitrogen assimilation	4	3
TF	PedR	Trx, thioredoxin protein	Photosynthesis; Carbon fixation	7	2
TF	SmtB	Zinc ion, (Zn2+)	Zinc resistance	2	1
TF	SphR	Inorganic phosphate	Phosphate metabolism	15	3
TF	SufR	Iron-sulfur cluster redox state	Iron-sulfur cluster biogenesis	4	4
TF	Zur	Zinc ion, (Zn2+)	Zinc homeostasis	7	3
RNA	Cobalamin	Adenosylcobalamin	Cobalamin biosynthesis	4	2
RNA	GEMM_RNA_motif	Cyclic diguanylate	Second messenger response	1	1
RNA	L10_leader		Ribosome biogenesis	1	1
RNA	TPP	Thiamine pyrophosphate	Thiamine biosynthesis	1	1
RNA	glnA	L-glutamine	Nitrogen assimilation	3	2

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Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --