Regulon of NtcB in Thermosynechococcus elongatus BP-1

Properties
Regulator type:	Transcription factor
TF locus tag:	tll1359 (deprecated)
Regulator family:	LysR
Regulation mode:	activator (repressor)
Biological process:	Nitrogen assimilation
Effector:	Nitrite
Regulog:	NtcB - Cyanobacteria
Statistics of regulated genes:
- Genes	10
- Operons	3
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 44 sites [see more]

Member of regulog collections

By taxonomy - Cyanobacteria
By TF family - LysR
By effector - Nitrite
By pathway - Nitrogen assimilation

Regulated operons
	Locus Tag	Name	Function
Position: -111 Score: 4.4 Sequence: ATACAAAAACTGTAT Locus tag: tlr1349 Name: nirA Funciton: ferredoxin--nitrite reductase Locus tag: tlr1350 Name: nrtA Funciton: nitrate/nitrite ABC transport system, substrate-binding protein Locus tag: tlr1351 Name: nrtB Funciton: nitrate/nitrite ABC transport system, permease protein Locus tag: tlr1352 Name: nrtC Funciton: nitrate/nitrite ABC transport system, ATP-binding protein Locus tag: tlr1353 Name: null Funciton: ORF_ID:tlr1353~putative transposase Locus tag: tlr1354 Name: nrtD Funciton: nitrate/nitrite ABC transport system, ATP-binding protein Locus tag: tlr1355 Name: narB Funciton: nitrate reductase
	tlr1349	nirA	ferredoxin--nitrite reductase
	tlr1350	nrtA	nitrate/nitrite ABC transport system, substrate-binding protein
	tlr1351	nrtB	nitrate/nitrite ABC transport system, permease protein
	tlr1352	nrtC	nitrate/nitrite ABC transport system, ATP-binding protein
	tlr1353		ORF_ID:tlr1353~putative transposase
	tlr1354	nrtD	nitrate/nitrite ABC transport system, ATP-binding protein
	tlr1355	narB	nitrate reductase
Position: -99 Score: 4.2 Sequence: ATGGGAAAGTTGCAT Locus tag: null Name: ntcB Funciton: nitrogen assimilation transcriptional activator NtcB
	null	ntcB	nitrogen assimilation transcriptional activator NtcB
Position: -33 Score: 4.2 Sequence: ATGCAGTTTATCCAA Locus tag: null Name: psbL Funciton: photosystem II protein L Locus tag: null Name: psbJ Funciton: photosystem II protein J
	null	psbL	photosystem II protein L
	null	psbJ	photosystem II protein J

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