Regulons of Bordetella bronchiseptica RB50

Allows to visualize regulome content in the context of metabolic pathways



Type	Regulator	Effector	Pathway	Operons	Sites
TF	BAV2320			2	1
TF	BAV2922		Metabolite transport	2	1
TF	Bpet4349		Glycolate utilization; Lactate utilization	3	4
TF	FdsR	Formate	Formate oxydation	2	3
TF	GabR	Gamma-aminobutyric acid	Gamma-aminobutyrate utilization	2	2
TF	GlcC	Glycolate	Glycolate utilization	3	4
TF	HrcA	Heat shock	Heat shock response	2	2
TF	LexA	DNA damage	SOS response	7	6
TF	MetR	Homocysteine	Methionine biosynthesis	3	4
TF	MlnR		Malonate metabolism	1	1
TF	ModE	Molybdate	Molybdopterin biosynthesis	1	1
TF	ModE3	Tungsten	Tungsten homeostasis	3	2
TF	NrdR	Deoxyribonucleotides	Deoxyribonucleotide biosynthesis	1	2
TF	OapR		Gamma-aminobutyrate utilization	1	1
TF	PdxR		Pyridoxine/pyridoxal homeostasis	1	1
TF	PdxR2	Pyridoxal-5-phosphate	Pyridoxine/pyridoxal homeostasis	2	2
TF	PdxW	Pyridoxal-5-phosphate	Pyridoxine/pyridoxal homeostasis	1	1
TF	PrpR	2-methylcitrate	Methylcitrate utilization	5	5
TF	SdhR		Tricarboxylic acid cycle	5	5
TF	UxuR2		Glucuronate utilization; Galacturonate utilization	2	1
TF	YdcR			2	4

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Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --