Regulons of Bordetella bronchiseptica RB50
|
Allows to visualize regulome content in the context of metabolic pathways |
|
| Type |
Regulator |
Effector |
Pathway |
Operons |
Sites |
| TF |
BAV2320 |
|
|
2 |
1 |
| TF |
BAV2922 |
|
Metabolite transport |
2 |
1 |
| TF |
Bpet4349 |
|
Glycolate utilization; Lactate utilization |
3 |
4 |
| TF |
FdsR |
Formate |
Formate oxydation |
2 |
3 |
| TF |
GabR |
Gamma-aminobutyric acid |
Gamma-aminobutyrate utilization |
2 |
2 |
| TF |
GlcC |
Glycolate |
Glycolate utilization |
3 |
4 |
| TF |
HrcA |
Heat shock |
Heat shock response |
2 |
2 |
| TF |
LexA |
DNA damage |
SOS response |
7 |
6 |
| TF |
MetR |
Homocysteine |
Methionine biosynthesis |
3 |
4 |
| TF |
MlnR |
|
Malonate metabolism |
1 |
1 |
| TF |
ModE |
Molybdate |
Molybdopterin biosynthesis |
1 |
1 |
| TF |
ModE3 |
Tungsten |
Tungsten homeostasis |
3 |
2 |
| TF |
NrdR |
Deoxyribonucleotides |
Deoxyribonucleotide biosynthesis |
1 |
2 |
| TF |
OapR |
|
Gamma-aminobutyrate utilization |
1 |
1 |
| TF |
PdxR |
|
Pyridoxine/pyridoxal homeostasis |
1 |
1 |
| TF |
PdxR2 |
Pyridoxal-5-phosphate |
Pyridoxine/pyridoxal homeostasis |
2 |
2 |
| TF |
PdxW |
Pyridoxal-5-phosphate |
Pyridoxine/pyridoxal homeostasis |
1 |
1 |
| TF |
PrpR |
2-methylcitrate |
Methylcitrate utilization |
5 |
5 |
| TF |
SdhR |
|
Tricarboxylic acid cycle |
5 |
5 |
| TF |
UxuR2 |
|
Glucuronate utilization; Galacturonate utilization |
2 |
1 |
| TF |
YdcR |
|
|
2 |
4 |
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Regulated Genes
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