Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulon of YdcR in Bordetella bronchiseptica RB50

Properties
Regulator type: Transcription factor
TF locus tag: BB1241
Regulator family: GntR/MocR
Regulation mode:
Biological process:
Effector:
Regulog: YdcR - Alcaligenaceae
Statistics of regulated genes:
- Genes 6
- Operons 2
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 4 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function

Position: -123
Score: 8.1
Sequence: ATCTGCTATGGTCTC-(9)-ATCTGCGCCTGTCCC
Locus tag: BB4510
Name: COG2863
Funciton: Probable cytochrome c2
Locus tag: BB4509
Name: COG3258
Funciton: Putative diheme cytochrome c-553
COG2863
Probable cytochrome c2
COG3258
Putative diheme cytochrome c-553

Position: -162
Score: 6.7
Sequence: CCCTGCTGCTGTTCG-(9)-ATCTGATCGTGTTCG
Position: -129
Score: 7.6
Sequence: AACTGATATGCTTTT-(15)-ATCTGTACTGATTTC
Position: -124
Score: 7
Sequence: ATATGCTTTTTTTAC-(10)-ATCTGTACTGATTTC
Locus tag: BB1238
Name: cydA
Funciton: putative Cytochrome bd2, subunit I
Locus tag: BB1239
Name: cydB
Funciton: putative Cytochrome bd2, subunit II
Locus tag: BB1240
Name: PF10617
Funciton: cytochrome associated protein
Locus tag: BB1241
Name: BB1241
Funciton: Transcriptional regulator, GntR family domain
cydA
putative Cytochrome bd2, subunit I
cydB
putative Cytochrome bd2, subunit II
PF10617
cytochrome associated protein
BB1241
Transcriptional regulator, GntR family domain
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Regulated Genes [ Tab delimited format ] DOWNLOAD
Regulatory Sites [ FASTA format ] DOWNLOAD