Regulon of LexA in Bordetella bronchiseptica RB50
| Regulator type: | Transcription factor |
| TF locus tag: | BB2271 |
| Regulator family: | LexA |
| Regulation mode: | repressor |
| Biological process: | SOS response |
| Effector: | DNA damage |
| Regulog: | LexA - Alcaligenaceae |
| Statistics of regulated genes: | |
| - Genes | 11 |
| - Operons | 6 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By trascription factor - LexA
- By taxonomy - Alcaligenaceae
- By TF family - LexA
- By effector - DNA damage
- By pathway - SOS response
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -150
Score: 6.1 Sequence: TACTGTTTATTTATACAGCA
Locus tag: BB4032
Name: uvrA Funciton: Excinuclease ABC subunit A
Locus tag: BB4033
Name: pabB Funciton: Para-aminobenzoate synthase, aminase component (EC 2.6.1.85)
Locus tag: BB4034
Name: pabC Funciton: Aminodeoxychorismate lyase (EC 4.1.3.38) |
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uvrA
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Excinuclease ABC subunit A
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pabB
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Para-aminobenzoate synthase, aminase component (EC 2.6.1.85)
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pabC
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Aminodeoxychorismate lyase (EC 4.1.3.38)
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Position: -41
Score: 6.3 Sequence: TTCTGTATAAATATACAGTA
Locus tag: BB1810
Name: uvrD Funciton: ATP-dependent DNA helicase II |
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uvrD
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ATP-dependent DNA helicase II
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Position: 38
Score: 5.2 Sequence: CGCTGTATATCCATACAGTC
Locus tag: BB2271
Name: lexA Funciton: SOS-response repressor and protease LexA (EC 3.4.21.88) |
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lexA
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SOS-response repressor and protease LexA (EC 3.4.21.88)
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Position: -35
Score: 6.3 Sequence: TACTGTATATTTATACAGTG
Locus tag: BB3086
Name: imuA Funciton: Predicted RecA/RadA recombinase
Locus tag: BB3087
Name: imuB Funciton: DNA polymerase-like protein PA0670
Locus tag: BB3088
Name: dnaE2 Funciton: DNA polymerase III alpha subunit (EC 2.7.7.7) |
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imuA
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Predicted RecA/RadA recombinase
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imuB
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DNA polymerase-like protein PA0670
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dnaE2
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DNA polymerase III alpha subunit (EC 2.7.7.7)
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Position: -135
Score: 5.7 Sequence: CACTGGATTTTTATCCAGTA
Locus tag: BB2076
Name: recA Funciton: Recombinase A
Locus tag: BB2077
Name: recX Funciton: Regulatory protein RecX |
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recA
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Recombinase A
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recX
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Regulatory protein RecX
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Position: -25
Score: 5.3 Sequence: TACTGCGTTTTTGTACAGTA
Locus tag: BB3446
Name: PF4055 Funciton: DNA repair photolyase |
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PF4055
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DNA repair photolyase
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |