Regulon of SdhR in Bordetella bronchiseptica RB50

Properties
Regulator type:	Transcription factor
TF locus tag:	BB3683
Regulator family:	GntR/Others
Regulation mode:
Biological process:	Tricarboxylic acid cycle
Effector:
Regulog:	SdhR - Alcaligenaceae
Statistics of regulated genes:
- Genes	11
- Operons	5
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 14 sites [see more]

Member of regulog collections

By taxonomy - Alcaligenaceae
By TF family - GntR/Others
By pathway - Tricarboxylic acid cycle

Regulated operons
	Locus Tag	Name	Function
Position: -122 Score: 6.4 Sequence: GATCAAGTCTTATATAAGACACAAGA Locus tag: BB1844 Name: acnA Funciton: Aconitate hydratase (EC 4.2.1.3)
	BB1844	acnA	Aconitate hydratase (EC 4.2.1.3)
Position: -104 Score: 6.3 Sequence: AGGCAAGTCTTATATAAGATATAAGA Locus tag: BB1850 Name: acnB Funciton: Aconitate hydratase (EC 4.2.1.3)
	BB1850	acnB	Aconitate hydratase (EC 4.2.1.3)
Position: -124 Score: 6.7 Sequence: ATTTTTGTCTTATATAAGATATAAGC Locus tag: BB3339 Name: aceA Funciton: Isocitrate lyase (EC 4.1.3.1)
	BB3339	aceA	Isocitrate lyase (EC 4.1.3.1)
Position: -140 Score: 7.8 Sequence: TCTTATATCTTATATAAGACATAAGA Locus tag: BB3683 Name: sdhR Funciton: Transcriptional regulator of TCA cycle, GntR family Locus tag: BB3682 Name: sdhC Funciton: Succinate dehydrogenase cytochrome b-556 subunit Locus tag: BB3681 Name: sdhD Funciton: Succinate dehydrogenase, hydrophobic subunit, cytochrome b556 Locus tag: BB3680 Name: sdhA Funciton: Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1) Locus tag: BB3679 Name: sdhB Funciton: Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1) Locus tag: BB3678 Name: COG2938 Funciton: succinate dehydrogenase iron-sulfur subunit Locus tag: BB3677 Name: gltA Funciton: Citrate synthase (si) (EC 2.3.3.1)
	BB3683	sdhR	Transcriptional regulator of TCA cycle, GntR family
	BB3682	sdhC	Succinate dehydrogenase cytochrome b-556 subunit
	BB3681	sdhD	Succinate dehydrogenase, hydrophobic subunit, cytochrome b556
	BB3680	sdhA	Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1)
	BB3679	sdhB	Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1)
	BB3678	COG2938	succinate dehydrogenase iron-sulfur subunit
	BB3677	gltA	Citrate synthase (si) (EC 2.3.3.1)
Position: -174 Score: 7.8 Sequence: TCTTATGTCTTATATAAGATATAAGA Locus tag: BB3684 Name: mdh Funciton: Malate dehydrogenase (EC 1.1.1.37)
	BB3684	mdh	Malate dehydrogenase (EC 1.1.1.37)

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	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD