Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulon of LiuR in Ralstonia eutropha H16

Properties
Regulator type: Transcription factor
TF locus tag: H16_A0165
Regulator family: MerR
Regulation mode:
Biological process: Branched-chain amino acid degradation
Effector:
Regulog: LiuR - Ralstonia
Statistics of regulated genes:
- Genes 20
- Operons 5
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 57 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function
Position: -130
Score: 6.3
Sequence: ATTGACGTTTACGTTAGC
Position: -124
Score: 5.5
Sequence: GTTTACGTTAGCGTCAAC
Locus tag: H16_A0164
Name: h16_A0164
Funciton: Metallo-beta-lactamase family protein
H16_A0164
h16_A0164
Metallo-beta-lactamase family protein
Position: -53
Score: 6.6
Sequence: ATTGACGTTTACGTAAAC
Position: -47
Score: 5.1
Sequence: GTTTACGTAAACGGCAAC
Locus tag: H16_A0602
Name: paaH
Funciton: 3-hydroxyacyl-CoA dehydrogenase
H16_A0602
paaH
3-hydroxyacyl-CoA dehydrogenase
Position: -93
Score: 6.6
Sequence: ATTGACGTTTACGTAAAC
Position: -87
Score: 5.3
Sequence: GTTTACGTAAACGTCAAT
Locus tag: H16_A0166
Name: paaI
Funciton: Phenylacetic acid degradation-related protein
Locus tag: H16_A0167
Name: liuA
Funciton: Isovaleryl-CoA dehydrogenase (EC 1.3.99.10); Butyryl-CoA dehydrogenase (EC 1.3.99.2)
Locus tag: H16_A0168
Name: aceK
Funciton: Isocitrate dehydrogenase phosphatase (EC 2.7.11.5)/kinase (EC 3.1.3.-)
Locus tag: H16_A0169
Name: cah
Funciton: Carbonic anhydrase (EC 4.2.1.1)
Locus tag: H16_A0170
Name: ivdA
Funciton: Acetyl-CoA C-acyltransferase (EC 2.3.1.16)
Locus tag: H16_A0171
Name: h16_A0171
Funciton: Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
Locus tag: H16_A0172
Name: ivdC
Funciton: Isovaleryl-CoA dehydrogenase (EC 1.3.99.10); Butyryl-CoA dehydrogenase (EC 1.3.99.2)
Locus tag: H16_A0173
Name: h16_A0173
Funciton: 2-Hydroxychromene-2-carboxylate isomerase
Locus tag: H16_A0174
Name: h16_A0174
Funciton: Putative phosphatase YieH
Locus tag: H16_A0175
Name: h16_A0175
Funciton: hypothetical protein
Locus tag: H16_A0176
Name: h16_A0176
Funciton: Maleylacetoacetate isomerase (EC 5.2.1.2) / Glutathione S-transferase
Locus tag: H16_A0177
Name: liuB
Funciton: Methylcrotonyl-CoA carboxylase carboxyl transferase subunit (EC 6.4.1.4)
Locus tag: H16_A0178
Name: h16_A0178
Funciton: Dienelactone hydrolase or related enzyme
Locus tag: H16_A0179
Name: liuC
Funciton: Methylglutaconyl-CoA hydratase (EC 4.2.1.18)
H16_A0166
paaI
Phenylacetic acid degradation-related protein
H16_A0167
liuA
Isovaleryl-CoA dehydrogenase (EC 1.3.99.10); Butyryl-CoA dehydrogenase (EC 1.3.99.2)
H16_A0168
aceK
Isocitrate dehydrogenase phosphatase (EC 2.7.11.5)/kinase (EC 3.1.3.-)
H16_A0169
cah
Carbonic anhydrase (EC 4.2.1.1)
H16_A0170
ivdA
Acetyl-CoA C-acyltransferase (EC 2.3.1.16)
H16_A0171
h16_A0171
Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
H16_A0172
ivdC
Isovaleryl-CoA dehydrogenase (EC 1.3.99.10); Butyryl-CoA dehydrogenase (EC 1.3.99.2)
H16_A0173
h16_A0173
2-Hydroxychromene-2-carboxylate isomerase
H16_A0174
h16_A0174
Putative phosphatase YieH
H16_A0175
h16_A0175
hypothetical protein
H16_A0176
h16_A0176
Maleylacetoacetate isomerase (EC 5.2.1.2) / Glutathione S-transferase
H16_A0177
liuB
Methylcrotonyl-CoA carboxylase carboxyl transferase subunit (EC 6.4.1.4)
H16_A0178
h16_A0178
Dienelactone hydrolase or related enzyme
H16_A0179
liuC
Methylglutaconyl-CoA hydratase (EC 4.2.1.18)
Position: -99
Score: 6.4
Sequence: GTTGACGCTAACGTAAAC
Position: -93
Score: 4.8
Sequence: GCTAACGTAAACGTCAAT
Locus tag: H16_A0165
Name: liuR
Funciton: Transcriptional regulator, MerR family
H16_A0165
liuR
Transcriptional regulator, MerR family
Position: -139
Score: 6
Sequence: CTTTACGTTAACGTCAAC
Position: -133
Score: 4.2
Sequence: GTTAACGTCAACGTCATA
Locus tag: H16_A0280
Name: mcm
Funciton: Methylmalonyl-CoA mutase (EC 5.4.99.2)
Locus tag: H16_A0281
Name: hit
Funciton: Bis(5'-nucleosyl)-tetraphosphatase (asymmetrical) (EC 3.6.1.17)
Locus tag: H16_A0282
Name: paaH1
Funciton: 3-hydroxybutyryl-CoA dehydrogenase (EC 1.1.1.157)
H16_A0280
mcm
Methylmalonyl-CoA mutase (EC 5.4.99.2)
H16_A0281
hit
Bis(5'-nucleosyl)-tetraphosphatase (asymmetrical) (EC 3.6.1.17)
H16_A0282
paaH1
3-hydroxybutyryl-CoA dehydrogenase (EC 1.1.1.157)
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